RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 SLC46A1Q96NT5 459 aa16.55■□□□□ 0.24
CD9-209ENST00000540891 KIFC1Q9BW19 673 aa16.55■□□□□ 0.24
CD9-209ENST00000540891 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.55■□□□□ 0.24
CD9-209ENST00000540891 MRM3Q9HC36 420 aaKnown RBP16.55■□□□□ 0.24
CD9-209ENST00000540891 SLC40A1Q9NP59 571 aa16.55■□□□□ 0.24
CD9-209ENST00000540891 OGFRQ9NZT2 677 aa16.55■□□□□ 0.24
CD9-209ENST00000540891 FAM8A1Q9UBU6 413 aa16.55■□□□□ 0.24
CD9-209ENST00000540891 APC2O95996 2303 aa16.54■□□□□ 0.24
CD9-209ENST00000540891 C17orf113A0A1B0GUU1 675 aa16.54■□□□□ 0.24
CD9-209ENST00000540891 CTAGE9A4FU28 777 aa16.54■□□□□ 0.24
CD9-209ENST00000540891 KLHL33A6NCF5 533 aa16.54■□□□□ 0.24
CD9-209ENST00000540891 AGRPO00253 132 aa16.54■□□□□ 0.24
CD9-209ENST00000540891 DUX1O43812 170 aa16.54■□□□□ 0.24
CD9-209ENST00000540891 OR1I1O60431 355 aa16.54■□□□□ 0.24
CD9-209ENST00000540891 THRAP10827 490 aa16.54■□□□□ 0.24
CD9-209ENST00000540891 MPSTP25325 297 aa16.54■□□□□ 0.24
CD9-209ENST00000540891 ARNTP27540 789 aa16.54■□□□□ 0.24
CD9-209ENST00000540891 HALP42357 657 aa16.54■□□□□ 0.24
CD9-209ENST00000540891 NSG1P42857 185 aa16.54■□□□□ 0.24
CD9-209ENST00000540891 PTGIRP43119 386 aa16.54■□□□□ 0.24
CD9-209ENST00000540891 PRAMEP78395 509 aa16.54■□□□□ 0.24
CD9-209ENST00000540891 EIF3IQ13347 325 aaKnown RBP16.54■□□□□ 0.24
CD9-209ENST00000540891 PHF19Q5T6S3 580 aa16.54■□□□□ 0.24
CD9-209ENST00000540891 TMEM71Q6P5X7 295 aa16.54■□□□□ 0.24
CD9-209ENST00000540891 CES3Q6UWW8 571 aa16.54■□□□□ 0.24
CD9-209ENST00000540891 TRIM48Q8IWZ4 208 aa16.54■□□□□ 0.24
CD9-209ENST00000540891 CFAP206Q8IYR0 622 aa16.54■□□□□ 0.24
CD9-209ENST00000540891 LSMEM2Q8N112 164 aa16.54■□□□□ 0.24
CD9-209ENST00000540891 AGGF1Q8N302 714 aaeCLIP16.54■□□□□ 0.24
CD9-209ENST00000540891 FBXO39Q8N4B4 442 aa16.54■□□□□ 0.24
CD9-209ENST00000540891 RCBTB1Q8NDN9 531 aa16.54■□□□□ 0.24
CD9-209ENST00000540891 MCUQ8NE86 351 aa16.54■□□□□ 0.24
CD9-209ENST00000540891 SPDYE1Q8NFV5 336 aaPredicted RBP16.54■□□□□ 0.24
CD9-209ENST00000540891 OR6P1Q8NGX9 317 aa16.54■□□□□ 0.24
CD9-209ENST00000540891 SNIP1Q8TAD8 396 aaKnown RBP16.54■□□□□ 0.24
CD9-209ENST00000540891 HM13Q8TCT9 377 aa16.54■□□□□ 0.24
CD9-209ENST00000540891 CXorf40BQ96DE9 158 aa16.54■□□□□ 0.24
CD9-209ENST00000540891 MFSD3Q96ES6 412 aa16.54■□□□□ 0.24
CD9-209ENST00000540891 RMDN2Q96LZ7 410 aa16.54■□□□□ 0.24
CD9-209ENST00000540891 SERPINB12Q96P63 405 aa16.54■□□□□ 0.24
CD9-209ENST00000540891 INSM2Q96T92 566 aaPredicted RBP16.54■□□□□ 0.24
CD9-209ENST00000540891 STRADBQ9C0K7 418 aa16.54■□□□□ 0.24
CD9-209ENST00000540891 WWP1Q9H0M0 922 aa16.54■□□□□ 0.24
CD9-209ENST00000540891 MARCH4Q9P2E8 410 aaPredicted RBP16.54■□□□□ 0.24
CD9-209ENST00000540891 PDP2Q9P2J9 529 aa16.54■□□□□ 0.24
CD9-209ENST00000540891 PCYOX1Q9UHG3 505 aa16.54■□□□□ 0.24
CD9-209ENST00000540891 SOX13Q9UN79 622 aa16.54■□□□□ 0.24
CD9-209ENST00000540891 LOXL2Q9Y4K0 774 aa16.54■□□□□ 0.24
CD9-209ENST00000540891 KMT2BQ9UMN6 2715 aaPredicted RBP16.53■□□□□ 0.24
CD9-209ENST00000540891 CDRT15L2A8MXV6 281 aa16.53■□□□□ 0.24
CD9-209ENST00000540891 PLD2O14939 933 aa16.53■□□□□ 0.24
CD9-209ENST00000540891 AP2A2O94973 939 aa16.53■□□□□ 0.24
CD9-209ENST00000540891 TNFSF15O95150 251 aa16.53■□□□□ 0.24
CD9-209ENST00000540891 POLBP06746 335 aa16.53■□□□□ 0.24
CD9-209ENST00000540891 MTHFD1P11586 935 aaKnown RBP16.53■□□□□ 0.24
CD9-209ENST00000540891 MLNP12872 115 aa16.53■□□□□ 0.24
CD9-209ENST00000540891 MAGEA3P43357 314 aa16.53■□□□□ 0.24
CD9-209ENST00000540891 MAPK9P45984 424 aa16.53■□□□□ 0.24
CD9-209ENST00000540891 GPR18Q14330 331 aa16.53■□□□□ 0.24
CD9-209ENST00000540891 RNASEH2BQ5TBB1 312 aaKnown RBP16.53■□□□□ 0.24
CD9-209ENST00000540891 CAPRIN2Q6IMN6 1127 aaKnown RBP16.53■□□□□ 0.24
CD9-209ENST00000540891 DUS1LQ6P1R4 473 aaKnown RBP16.53■□□□□ 0.24
CD9-209ENST00000540891 FOXR1Q6PIV2 292 aa16.53■□□□□ 0.24
CD9-209ENST00000540891 WDR74Q6RFH5 385 aaPredicted RBP16.53■□□□□ 0.24
CD9-209ENST00000540891 LDB1Q86U70 411 aaPredicted RBP16.53■□□□□ 0.24
CD9-209ENST00000540891 AHCYL2Q96HN2 611 aaKnown RBP16.53■□□□□ 0.24
CD9-209ENST00000540891 ZNF578Q96N58 590 aaPredicted RBP16.53■□□□□ 0.24
CD9-209ENST00000540891 DPYSL5Q9BPU6 564 aa16.53■□□□□ 0.24
CD9-209ENST00000540891 TRIM56Q9BRZ2 755 aaKnown RBP16.53■□□□□ 0.24
CD9-209ENST00000540891 CCM2Q9BSQ5 444 aa16.53■□□□□ 0.24
CD9-209ENST00000540891 COG4Q9H9E3 785 aa16.53■□□□□ 0.24
CD9-209ENST00000540891 ACSL5Q9ULC5 683 aa16.53■□□□□ 0.24
CD9-209ENST00000540891 CFAP20Q9Y6A4 193 aaKnown RBP16.53■□□□□ 0.24
CD9-209ENST00000540891 GOLGA8MH3BSY2 632 aa16.52■□□□□ 0.24
CD9-209ENST00000540891 ITIH1P19827 911 aa16.52■□□□□ 0.24
CD9-209ENST00000540891 ETV5P41161 510 aa16.52■□□□□ 0.24
CD9-209ENST00000540891 ERVPABLB-1P60509 514 aa16.52■□□□□ 0.24
CD9-209ENST00000540891 SARNPP82979 210 aaKnown RBP16.52■□□□□ 0.24
CD9-209ENST00000540891 PTK6Q13882 451 aa16.52■□□□□ 0.24
CD9-209ENST00000540891 PPP1R7Q15435 360 aa16.52■□□□□ 0.24
CD9-209ENST00000540891 FASTKD1Q53R41 847 aaKnown RBP16.52■□□□□ 0.24
CD9-209ENST00000540891 LYPLAL1Q5VWZ2 237 aa16.52■□□□□ 0.24
CD9-209ENST00000540891 CERS6Q6ZMG9 384 aa16.52■□□□□ 0.24
CD9-209ENST00000540891 RBM12BQ8IXT5 1001 aaKnown RBP16.52■□□□□ 0.24
CD9-209ENST00000540891 NCSTNQ92542 709 aa16.52■□□□□ 0.24
CD9-209ENST00000540891 FGF11Q92914 225 aa16.52■□□□□ 0.24
CD9-209ENST00000540891 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.52■□□□□ 0.24
CD9-209ENST00000540891 TMEM159Q96B96 161 aa16.52■□□□□ 0.24
CD9-209ENST00000540891 C12orf66Q96MD2 445 aa16.52■□□□□ 0.24
CD9-209ENST00000540891 CMKLR1Q99788 373 aa16.52■□□□□ 0.24
CD9-209ENST00000540891 EPB41L1Q9H4G0 881 aa16.52■□□□□ 0.24
CD9-209ENST00000540891 CATSPERZQ9NTU4 200 aa16.52■□□□□ 0.24
CD9-209ENST00000540891 IMP3Q9NV31 184 aaKnown RBP16.52■□□□□ 0.24
CD9-209ENST00000540891 A0A087WV48 116 aa16.51■□□□□ 0.23
CD9-209ENST00000540891 HGSO14964 777 aaPredicted RBP16.51■□□□□ 0.23
CD9-209ENST00000540891 CD3EAPO15446 510 aaKnown RBP16.51■□□□□ 0.23
CD9-209ENST00000540891 UBXN7O94888 489 aa16.51■□□□□ 0.23
CD9-209ENST00000540891 ITGA2BP08514 1039 aa16.51■□□□□ 0.23
CD9-209ENST00000540891 SLC35G4P0C7Q5 338 aa16.51■□□□□ 0.23
CD9-209ENST00000540891 TYRP1P17643 537 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms