RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 DBPQ10586 325 aaPredicted RBP12.45□□□□□ -0.42
DDX55-206ENST00000539934 CHAF1BQ13112 559 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 KLF1Q13351 362 aaPredicted RBP12.45□□□□□ -0.42
DDX55-206ENST00000539934 TRIP13Q15645 432 aaPredicted RBP12.45□□□□□ -0.42
DDX55-206ENST00000539934 ARHGAP17Q68EM7 881 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 TXNRD3NBQ6F5E7 133 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 PYHIN1Q6K0P9 492 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 HMBOX1Q6NT76 420 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 PMF1Q6P1K2 205 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 SYCE2Q6PIF2 218 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 LYPD8Q6UX82 237 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 MFSD7Q6UXD7 560 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 RGS9BPQ6ZS82 235 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 GPRIN3Q6ZVF9 776 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 FBXO15Q8NCQ5 510 aaPredicted RBP12.45□□□□□ -0.42
DDX55-206ENST00000539934 HEXDCQ8WVB3 486 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 FIG4Q92562 907 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 ACSF2Q96CM8 615 aaPredicted RBP12.45□□□□□ -0.42
DDX55-206ENST00000539934 FMO2Q99518 471 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 CLEC1BQ9P126 229 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 CNOT11Q9UKZ1 510 aaKnown RBP12.45□□□□□ -0.42
DDX55-206ENST00000539934 SPTBN2O15020 2390 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 TDRD15B5MCY1 1934 aaKnown RBP12.45□□□□□ -0.42
DDX55-206ENST00000539934 CFAP47Q6ZTR5 3102 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 CACNA1GO43497 2377 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 A0A1W2PRG6 482 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 HSBP1L1C9JCN9 74 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 TP73O15350 636 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 FABP1P07148 127 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 GPD1P21695 349 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 NRIP1P48552 1158 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 PSMD4P55036 377 aaKnown RBP12.45□□□□□ -0.42
DDX55-206ENST00000539934 DRG2P55039 364 aaKnown RBP12.45□□□□□ -0.42
DDX55-206ENST00000539934 CREMQ03060 361 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 CLN3Q13286 438 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 PMS2P3Q13401 168 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 RIN1Q13671 783 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 UBAP2Q5T6F2 1119 aaKnown RBP12.45□□□□□ -0.42
DDX55-206ENST00000539934 CASC4Q6P4E1 433 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 POLNQ7Z5Q5 900 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 TOP6BLQ8N6T0 577 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 TUBGCP3Q96CW5 907 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 CCDC120Q96HB5 630 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 CITED4Q96RK1 184 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 C11orf84Q9BUA3 381 aaPredicted RBP12.45□□□□□ -0.42
DDX55-206ENST00000539934 SLC2A11Q9BYW1 496 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 FRMD8P1Q9BZ68 369 aaPredicted RBP12.45□□□□□ -0.42
DDX55-206ENST00000539934 SLC19A3Q9BZV2 496 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 SAR1AQ9NR31 198 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 UXTQ9UBK9 157 aaPredicted RBP12.45□□□□□ -0.42
DDX55-206ENST00000539934 NT5C1B-RDH14C9J2C7 533 aa12.44□□□□□ -0.42
DDX55-206ENST00000539934 CYB561D2O14569 222 aa12.44□□□□□ -0.42
DDX55-206ENST00000539934 DNALI1O14645 258 aaPredicted RBP12.44□□□□□ -0.42
DDX55-206ENST00000539934 TSPAN4O14817 238 aa12.44□□□□□ -0.42
DDX55-206ENST00000539934 MAN1A2O60476 641 aa12.44□□□□□ -0.42
DDX55-206ENST00000539934 COX5BP10606 129 aa12.44□□□□□ -0.42
DDX55-206ENST00000539934 CYP2A6P11509 494 aaPredicted RBP12.44□□□□□ -0.42
DDX55-206ENST00000539934 PRG2P13727 222 aa12.44□□□□□ -0.42
DDX55-206ENST00000539934 SPAM1P38567 509 aa12.44□□□□□ -0.42
DDX55-206ENST00000539934 ZXDAP98168 799 aa12.44□□□□□ -0.42
DDX55-206ENST00000539934 ALDH6A1Q02252 535 aaKnown RBP12.44□□□□□ -0.42
DDX55-206ENST00000539934 CALCOCO2Q13137 446 aa12.44□□□□□ -0.42
DDX55-206ENST00000539934 PKDCCQ504Y2 493 aa12.44□□□□□ -0.42
DDX55-206ENST00000539934 C3orf33Q6P1S2 294 aa12.44□□□□□ -0.42
DDX55-206ENST00000539934 ANKS1BQ7Z6G8 1248 aa12.44□□□□□ -0.42
DDX55-206ENST00000539934 HUS1BQ8NHY5 278 aa12.44□□□□□ -0.42
DDX55-206ENST00000539934 SLC35F5Q8WV83 523 aa12.44□□□□□ -0.42
DDX55-206ENST00000539934 ADAM7Q9H2U9 754 aa12.44□□□□□ -0.42
DDX55-206ENST00000539934 DDX28Q9NUL7 540 aaKnown RBP12.44□□□□□ -0.42
DDX55-206ENST00000539934 COA4Q9NYJ1 87 aa12.44□□□□□ -0.42
DDX55-206ENST00000539934 CDH22Q9UJ99 828 aa12.44□□□□□ -0.42
DDX55-206ENST00000539934 TLK1Q9UKI8 766 aa12.44□□□□□ -0.42
DDX55-206ENST00000539934 CDV3Q9UKY7 258 aaKnown RBP12.44□□□□□ -0.42
DDX55-206ENST00000539934 SLC22A7Q9Y694 548 aa12.44□□□□□ -0.42
DDX55-206ENST00000539934 KCNE2Q9Y6J6 123 aa12.44□□□□□ -0.42
DDX55-206ENST00000539934 MYO10Q9HD67 2058 aa12.44□□□□□ -0.42
DDX55-206ENST00000539934 TMEM120BA0PK00 339 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 ARL5CA6NH57 179 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 J3KRW8 73 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 PPM1DO15297 605 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 GRAP2O75791 330 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 RBL1P28749 1068 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 RPL21P46778 160 aaKnown RBP12.43□□□□□ -0.42
DDX55-206ENST00000539934 MEOX2P50222 304 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 GATMP50440 423 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 RIDAP52758 137 aaKnown RBP12.43□□□□□ -0.42
DDX55-206ENST00000539934 BCAT1P54687 386 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 DCDC1P59894 354 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 SLC25A11Q02978 314 aaKnown RBP12.43□□□□□ -0.42
DDX55-206ENST00000539934 BST2Q10589 180 aaKnown RBP12.43□□□□□ -0.42
DDX55-206ENST00000539934 ADAM15Q13444 863 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 MMEL1Q495T6 779 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 TFDP3Q5H9I0 405 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 IL31Q6EBC2 164 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 CROCCP2Q86T23 111 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 NRSN1Q8IZ57 195 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 OXR1Q8N573 874 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.43□□□□□ -0.42
DDX55-206ENST00000539934 GSTCDQ8NEC7 633 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 TRPV3Q8NET8 790 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms