RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 NRSN1Q8IZ57 195 aa22.08■■□□□ 1.12
HOMER3-204ENST00000539827 BEND7Q8N7W2 519 aaPredicted RBP22.08■■□□□ 1.12
HOMER3-204ENST00000539827 DDHD1Q8NEL9 900 aa22.08■■□□□ 1.12
HOMER3-204ENST00000539827 TWIST2Q8WVJ9 160 aa22.08■■□□□ 1.12
HOMER3-204ENST00000539827 BTN2A2Q8WVV5 523 aa22.08■■□□□ 1.12
HOMER3-204ENST00000539827 PPP1R16AQ96I34 528 aa22.08■■□□□ 1.12
HOMER3-204ENST00000539827 COPG1Q9Y678 874 aaKnown RBP22.08■■□□□ 1.12
HOMER3-204ENST00000539827 ATP6AP2A0A1C7CYW4 349 aa22.07■■□□□ 1.12
HOMER3-204ENST00000539827 E2F3O00716 465 aa22.07■■□□□ 1.12
HOMER3-204ENST00000539827 INPP4BO15327 924 aa22.07■■□□□ 1.12
HOMER3-204ENST00000539827 SGTAO43765 313 aa22.07■■□□□ 1.12
HOMER3-204ENST00000539827 MMP20O60882 483 aa22.07■■□□□ 1.12
HOMER3-204ENST00000539827 CRCPO75575 148 aa22.07■■□□□ 1.12
HOMER3-204ENST00000539827 ATP6AP2O75787 350 aa22.07■■□□□ 1.12
HOMER3-204ENST00000539827 CBSLP0DN79 551 aa22.07■■□□□ 1.12
HOMER3-204ENST00000539827 PRDX6P30041 224 aa22.07■■□□□ 1.12
HOMER3-204ENST00000539827 CBSP35520 551 aa22.07■■□□□ 1.12
HOMER3-204ENST00000539827 PGM1P36871 562 aa22.07■■□□□ 1.12
HOMER3-204ENST00000539827 EIF2DP41214 584 aaKnown RBP22.07■■□□□ 1.12
HOMER3-204ENST00000539827 SLC25A3Q00325 362 aa22.07■■□□□ 1.12
HOMER3-204ENST00000539827 ELP6Q0PNE2 266 aa22.07■■□□□ 1.12
HOMER3-204ENST00000539827 HSPA14Q0VDF9 509 aa22.07■■□□□ 1.12
HOMER3-204ENST00000539827 PELI3Q8N2H9 469 aa22.07■■□□□ 1.12
HOMER3-204ENST00000539827 OR56A4Q8NGH8 313 aa22.07■■□□□ 1.12
HOMER3-204ENST00000539827 C19orf60Q96EN9 201 aa22.07■■□□□ 1.12
HOMER3-204ENST00000539827 DTD2Q96FN9 168 aa22.07■■□□□ 1.12
HOMER3-204ENST00000539827 EGFL8Q99944 293 aa22.07■■□□□ 1.12
HOMER3-204ENST00000539827 KLHL42Q9P2K6 505 aa22.07■■□□□ 1.12
HOMER3-204ENST00000539827 BTRCQ9Y297 605 aa22.07■■□□□ 1.12
HOMER3-204ENST00000539827 TIMM22Q9Y584 194 aa22.07■■□□□ 1.12
HOMER3-204ENST00000539827 C5orf42Q9H799 3197 aa22.07■■□□□ 1.12
HOMER3-204ENST00000539827 OR2AG2A6NM03 316 aa22.07■■□□□ 1.12
HOMER3-204ENST00000539827 PSMD11O00231 422 aa22.07■■□□□ 1.12
HOMER3-204ENST00000539827 PIP5K1BO14986 540 aa22.07■■□□□ 1.12
HOMER3-204ENST00000539827 AREL1O15033 823 aa22.07■■□□□ 1.12
HOMER3-204ENST00000539827 TAPBPO15533 448 aa22.07■■□□□ 1.12
HOMER3-204ENST00000539827 MTHFRP42898 656 aa22.07■■□□□ 1.12
HOMER3-204ENST00000539827 BOP1Q14137 746 aaKnown RBP22.07■■□□□ 1.12
HOMER3-204ENST00000539827 ERN2Q76MJ5 926 aaKnown RBP22.07■■□□□ 1.12
HOMER3-204ENST00000539827 PDPRQ8NCN5 879 aa22.07■■□□□ 1.12
HOMER3-204ENST00000539827 GLYATL1Q969I3 302 aa22.07■■□□□ 1.12
HOMER3-204ENST00000539827 ZNF225Q9UK10 706 aa22.07■■□□□ 1.12
HOMER3-204ENST00000539827 STON1Q9Y6Q2 735 aa22.07■■□□□ 1.12
HOMER3-204ENST00000539827 C1QTNF3-AMACRE9PGA6 284 aa22.06■■□□□ 1.12
HOMER3-204ENST00000539827 ARNTLO00327 626 aa22.06■■□□□ 1.12
HOMER3-204ENST00000539827 BMP8BP34820 402 aa22.06■■□□□ 1.12
HOMER3-204ENST00000539827 LTBRP36941 435 aa22.06■■□□□ 1.12
HOMER3-204ENST00000539827 HSPA7P48741 367 aa22.06■■□□□ 1.12
HOMER3-204ENST00000539827 GALK1P51570 392 aa22.06■■□□□ 1.12
HOMER3-204ENST00000539827 NAA20P61599 178 aa22.06■■□□□ 1.12
HOMER3-204ENST00000539827 CUL3Q13618 768 aa22.06■■□□□ 1.12
HOMER3-204ENST00000539827 PCBP2Q15366 365 aaKnown RBP eCLIP22.06■■□□□ 1.12
HOMER3-204ENST00000539827 CRY1Q16526 586 aa22.06■■□□□ 1.12
HOMER3-204ENST00000539827 LRRK1Q38SD2 2015 aa22.06■■□□□ 1.12
HOMER3-204ENST00000539827 CACUL1Q86Y37 369 aa22.06■■□□□ 1.12
HOMER3-204ENST00000539827 VRK3Q8IV63 474 aa22.06■■□□□ 1.12
HOMER3-204ENST00000539827 DDIASQ8IXT1 998 aa22.06■■□□□ 1.12
HOMER3-204ENST00000539827 TUBB1Q9H4B7 451 aa22.06■■□□□ 1.12
HOMER3-204ENST00000539827 PTBP2Q9UKA9 531 aaKnown RBP22.06■■□□□ 1.12
HOMER3-204ENST00000539827 H0Y858 1186 aa22.05■■□□□ 1.12
HOMER3-204ENST00000539827 GPC4O75487 556 aa22.05■■□□□ 1.12
HOMER3-204ENST00000539827 RECQL5O94762 991 aaPredicted RBP22.05■■□□□ 1.12
HOMER3-204ENST00000539827 MLYCDO95822 493 aa22.05■■□□□ 1.12
HOMER3-204ENST00000539827 C6P13671 934 aa22.05■■□□□ 1.12
HOMER3-204ENST00000539827 VCLP18206 1134 aa22.05■■□□□ 1.12
HOMER3-204ENST00000539827 CPOXP36551 454 aa22.05■■□□□ 1.12
HOMER3-204ENST00000539827 LDLRAP1Q5SW96 308 aa22.05■■□□□ 1.12
HOMER3-204ENST00000539827 MBOAT1Q6ZNC8 495 aa22.05■■□□□ 1.12
HOMER3-204ENST00000539827 GOLGA7Q7Z5G4 137 aa22.05■■□□□ 1.12
HOMER3-204ENST00000539827 DSG4Q86SJ6 1040 aa22.05■■□□□ 1.12
HOMER3-204ENST00000539827 SNX32Q86XE0 403 aa22.05■■□□□ 1.12
HOMER3-204ENST00000539827 SUGP1Q8IWZ8 645 aaKnown RBP22.05■■□□□ 1.12
HOMER3-204ENST00000539827 DCBLD1Q8N8Z6 715 aa22.05■■□□□ 1.12
HOMER3-204ENST00000539827 SKA2Q8WVK7 121 aaPredicted RBP22.05■■□□□ 1.12
HOMER3-204ENST00000539827 ELMO1Q92556 727 aa22.05■■□□□ 1.12
HOMER3-204ENST00000539827 VPS35Q96QK1 796 aa22.05■■□□□ 1.12
HOMER3-204ENST00000539827 NOL11Q9H8H0 719 aaKnown RBP22.05■■□□□ 1.12
HOMER3-204ENST00000539827 FAM8A1Q9UBU6 413 aa22.05■■□□□ 1.12
HOMER3-204ENST00000539827 GIMAP2Q9UG22 337 aa22.05■■□□□ 1.12
HOMER3-204ENST00000539827 TNPO3Q9Y5L0 923 aaKnown RBP22.05■■□□□ 1.12
HOMER3-204ENST00000539827 UBDO15205 165 aa22.05■■□□□ 1.12
HOMER3-204ENST00000539827 LZTS3O60299 673 aaPredicted RBP22.05■■□□□ 1.12
HOMER3-204ENST00000539827 AP2A2O94973 939 aa22.05■■□□□ 1.12
HOMER3-204ENST00000539827 OR4F21O95013 312 aa22.05■■□□□ 1.12
HOMER3-204ENST00000539827 MNAT1P51948 309 aa22.05■■□□□ 1.12
HOMER3-204ENST00000539827 SEC13P55735 322 aa22.05■■□□□ 1.12
HOMER3-204ENST00000539827 CREB5Q02930 508 aa22.05■■□□□ 1.12
HOMER3-204ENST00000539827 CNTN1Q12860 1018 aa22.05■■□□□ 1.12
HOMER3-204ENST00000539827 RIPK1Q13546 671 aa22.05■■□□□ 1.12
HOMER3-204ENST00000539827 SNCBQ16143 134 aa22.05■■□□□ 1.12
HOMER3-204ENST00000539827 CHSY3Q70JA7 882 aa22.05■■□□□ 1.12
HOMER3-204ENST00000539827 RAVER1Q8IY67 606 aaKnown RBP22.05■■□□□ 1.12
HOMER3-204ENST00000539827 RASGEF1AQ8N9B8 481 aa22.05■■□□□ 1.12
HOMER3-204ENST00000539827 NUS1Q96E22 293 aa22.05■■□□□ 1.12
HOMER3-204ENST00000539827 CDK15Q96Q40 435 aa22.05■■□□□ 1.12
HOMER3-204ENST00000539827 THTPAQ9BU02 230 aa22.05■■□□□ 1.12
HOMER3-204ENST00000539827 C1orf21Q9H246 121 aa22.05■■□□□ 1.12
HOMER3-204ENST00000539827 WWOXQ9NZC7 414 aa22.05■■□□□ 1.12
HOMER3-204ENST00000539827 ESRRBO95718 433 aa22.04■■□□□ 1.12
HOMER3-204ENST00000539827 LINC00032P0C843 101 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms