RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 C19orf57Q0VDD7 668 aa16.42■□□□□ 0.22
DDB1-215ENST00000539712 OASLQ15646 514 aaKnown RBP16.42■□□□□ 0.22
DDB1-215ENST00000539712 ZNF658BQ4V348 819 aaPredicted RBP16.42■□□□□ 0.22
DDB1-215ENST00000539712 ARHGEF18Q6ZSZ5 1173 aa16.42■□□□□ 0.22
DDB1-215ENST00000539712 NXPE1Q8N323 547 aa16.42■□□□□ 0.22
DDB1-215ENST00000539712 TXLNBQ8N3L3 684 aa16.42■□□□□ 0.22
DDB1-215ENST00000539712 LILRA3Q8N6C8 439 aaPredicted RBP16.42■□□□□ 0.22
DDB1-215ENST00000539712 SPDYE1Q8NFV5 336 aaPredicted RBP16.42■□□□□ 0.22
DDB1-215ENST00000539712 OR2L2Q8NH16 312 aa16.42■□□□□ 0.22
DDB1-215ENST00000539712 CXorf40BQ96DE9 158 aa16.42■□□□□ 0.22
DDB1-215ENST00000539712 DNAJC1Q96KC8 554 aaKnown RBP16.42■□□□□ 0.22
DDB1-215ENST00000539712 INSM2Q96T92 566 aaPredicted RBP16.42■□□□□ 0.22
DDB1-215ENST00000539712 RAB33BQ9H082 229 aa16.42■□□□□ 0.22
DDB1-215ENST00000539712 EPHA6Q9UF33 1036 aa16.42■□□□□ 0.22
DDB1-215ENST00000539712 IGLV3-16A0A075B6K0 115 aa16.41■□□□□ 0.22
DDB1-215ENST00000539712 TRBV5-4A0A0C4DH59 114 aa16.41■□□□□ 0.22
DDB1-215ENST00000539712 TOX3O15405 576 aaPredicted RBP16.41■□□□□ 0.22
DDB1-215ENST00000539712 RAD1O60671 282 aa16.41■□□□□ 0.22
DDB1-215ENST00000539712 AP2A1O95782 977 aa16.41■□□□□ 0.22
DDB1-215ENST00000539712 PRSS56P0CW18 603 aa16.41■□□□□ 0.22
DDB1-215ENST00000539712 LIFP15018 202 aa16.41■□□□□ 0.22
DDB1-215ENST00000539712 AMD1P17707 334 aa16.41■□□□□ 0.22
DDB1-215ENST00000539712 SH3BP2P78314 561 aa16.41■□□□□ 0.22
DDB1-215ENST00000539712 PDE1BQ01064 536 aa16.41■□□□□ 0.22
DDB1-215ENST00000539712 PRSS42Q7Z5A4 293 aa16.41■□□□□ 0.22
DDB1-215ENST00000539712 SNX20Q7Z614 316 aa16.41■□□□□ 0.22
DDB1-215ENST00000539712 KLHL6Q8WZ60 621 aa16.41■□□□□ 0.22
DDB1-215ENST00000539712 TEFMQ96QE5 360 aaKnown RBP16.41■□□□□ 0.22
DDB1-215ENST00000539712 SLC12A9Q9BXP2 914 aa16.41■□□□□ 0.22
DDB1-215ENST00000539712 ZNF768Q9H5H4 540 aaKnown RBP16.41■□□□□ 0.22
DDB1-215ENST00000539712 LRRC40Q9H9A6 602 aa16.41■□□□□ 0.22
DDB1-215ENST00000539712 PIH1D1Q9NWS0 290 aaKnown RBP16.41■□□□□ 0.22
DDB1-215ENST00000539712 SEMA5BQ9P283 1151 aa16.41■□□□□ 0.22
DDB1-215ENST00000539712 TMEM184BQ9Y519 407 aaPredicted RBP16.41■□□□□ 0.22
DDB1-215ENST00000539712 MROH6A6NGR9 719 aa16.4■□□□□ 0.22
DDB1-215ENST00000539712 H7C0S8 307 aa16.4■□□□□ 0.22
DDB1-215ENST00000539712 LIASO43766 372 aa16.4■□□□□ 0.22
DDB1-215ENST00000539712 ITGB2P05107 769 aa16.4■□□□□ 0.22
DDB1-215ENST00000539712 MTHFD1P11586 935 aaKnown RBP16.4■□□□□ 0.22
DDB1-215ENST00000539712 PBLDP30039 288 aaPredicted RBP16.4■□□□□ 0.22
DDB1-215ENST00000539712 HALP42357 657 aa16.4■□□□□ 0.22
DDB1-215ENST00000539712 CAPRIN2Q6IMN6 1127 aaKnown RBP16.4■□□□□ 0.22
DDB1-215ENST00000539712 DUS1LQ6P1R4 473 aaKnown RBP16.4■□□□□ 0.22
DDB1-215ENST00000539712 CEACAM20Q6UY09 585 aa16.4■□□□□ 0.22
DDB1-215ENST00000539712 SLC13A5Q86YT5 568 aaPredicted RBP16.4■□□□□ 0.22
DDB1-215ENST00000539712 PIANPQ8IYJ0 282 aa16.4■□□□□ 0.22
DDB1-215ENST00000539712 CACNA2D3Q8IZS8 1091 aa16.4■□□□□ 0.22
DDB1-215ENST00000539712 TAB3Q8N5C8 712 aaPredicted RBP16.4■□□□□ 0.22
DDB1-215ENST00000539712 EXTL1Q92935 676 aa16.4■□□□□ 0.22
DDB1-215ENST00000539712 ZPBPQ9BS86 351 aa16.4■□□□□ 0.22
DDB1-215ENST00000539712 WWP1Q9H0M0 922 aa16.4■□□□□ 0.22
DDB1-215ENST00000539712 NLE1Q9NVX2 485 aaPredicted RBP16.4■□□□□ 0.22
DDB1-215ENST00000539712 ACSL5Q9ULC5 683 aa16.4■□□□□ 0.22
DDB1-215ENST00000539712 GUCA1BQ9UMX6 200 aa16.4■□□□□ 0.22
DDB1-215ENST00000539712 CFAP20Q9Y6A4 193 aaKnown RBP16.4■□□□□ 0.22
DDB1-215ENST00000539712 SPTA1P02549 2419 aa16.39■□□□□ 0.21
DDB1-215ENST00000539712 POLR1CO15160 346 aaPredicted RBP16.39■□□□□ 0.21
DDB1-215ENST00000539712 STK17BO94768 372 aa16.39■□□□□ 0.21
DDB1-215ENST00000539712 DLGAP3O95886 979 aa16.39■□□□□ 0.21
DDB1-215ENST00000539712 PTMAP06454 111 aaKnown RBP16.39■□□□□ 0.21
DDB1-215ENST00000539712 ZNF28P17035 718 aa16.39■□□□□ 0.21
DDB1-215ENST00000539712 MC4RP32245 332 aa16.39■□□□□ 0.21
DDB1-215ENST00000539712 HADHAP40939 763 aa16.39■□□□□ 0.21
DDB1-215ENST00000539712 PRLHRP49683 370 aa16.39■□□□□ 0.21
DDB1-215ENST00000539712 SEPHS1P49903 392 aa16.39■□□□□ 0.21
DDB1-215ENST00000539712 ATP1A2P50993 1020 aa16.39■□□□□ 0.21
DDB1-215ENST00000539712 POU6F1Q14863 301 aa16.39■□□□□ 0.21
DDB1-215ENST00000539712 SIX1Q15475 284 aaPredicted RBP16.39■□□□□ 0.21
DDB1-215ENST00000539712 TBR1Q16650 682 aa16.39■□□□□ 0.21
DDB1-215ENST00000539712 P3H1Q32P28 736 aa16.39■□□□□ 0.21
DDB1-215ENST00000539712 GPR33Q49SQ1 333 aa16.39■□□□□ 0.21
DDB1-215ENST00000539712 MEI1Q5TIA1 1274 aa16.39■□□□□ 0.21
DDB1-215ENST00000539712 FAM92BQ6ZTR7 304 aa16.39■□□□□ 0.21
DDB1-215ENST00000539712 PRUNE1Q86TP1 453 aa16.39■□□□□ 0.21
DDB1-215ENST00000539712 ULK4Q96C45 1275 aa16.39■□□□□ 0.21
DDB1-215ENST00000539712 MED8Q96G25 268 aa16.39■□□□□ 0.21
DDB1-215ENST00000539712 CDKN2AIPNLQ96HQ2 116 aa16.39■□□□□ 0.21
DDB1-215ENST00000539712 RMDN2Q96LZ7 410 aa16.39■□□□□ 0.21
DDB1-215ENST00000539712 COPS8Q99627 209 aa16.39■□□□□ 0.21
DDB1-215ENST00000539712 IMP3Q9NV31 184 aaKnown RBP16.39■□□□□ 0.21
DDB1-215ENST00000539712 CRLS1Q9UJA2 301 aa16.39■□□□□ 0.21
DDB1-215ENST00000539712 IGHV5-51A0A0C4DH38 117 aa16.38■□□□□ 0.21
DDB1-215ENST00000539712 LOC101059948A0A1B0GTJ6 334 aa16.38■□□□□ 0.21
DDB1-215ENST00000539712 KLHL33A6NCF5 533 aa16.38■□□□□ 0.21
DDB1-215ENST00000539712 ATP1B2P14415 290 aaPredicted RBP16.38■□□□□ 0.21
DDB1-215ENST00000539712 ITGALP20701 1170 aa16.38■□□□□ 0.21
DDB1-215ENST00000539712 ACRV1P26436 265 aa16.38■□□□□ 0.21
DDB1-215ENST00000539712 STIP1P31948 543 aaKnown RBP16.38■□□□□ 0.21
DDB1-215ENST00000539712 GRIA1P42261 906 aa16.38■□□□□ 0.21
DDB1-215ENST00000539712 GSDMDP57764 484 aa16.38■□□□□ 0.21
DDB1-215ENST00000539712 CACHD1Q5VU97 1274 aa16.38■□□□□ 0.21
DDB1-215ENST00000539712 SERPINA9Q86WD7 417 aa16.38■□□□□ 0.21
DDB1-215ENST00000539712 CFAP206Q8IYR0 622 aa16.38■□□□□ 0.21
DDB1-215ENST00000539712 NLGN4XQ8N0W4 816 aa16.38■□□□□ 0.21
DDB1-215ENST00000539712 IL22RA1Q8N6P7 574 aa16.38■□□□□ 0.21
DDB1-215ENST00000539712 GLIS1Q8NBF1 620 aa16.38■□□□□ 0.21
DDB1-215ENST00000539712 NLGN4YQ8NFZ3 816 aaPredicted RBP16.38■□□□□ 0.21
DDB1-215ENST00000539712 C1orf54Q8WWF1 131 aa16.38■□□□□ 0.21
DDB1-215ENST00000539712 ZDHHC12Q96GR4 267 aa16.38■□□□□ 0.21
DDB1-215ENST00000539712 SLC41A2Q96JW4 573 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms