RNA–Protein interactions for RNA: ENST00000538708.5

PTPRB-204, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 1 (best) BASIC

Gene PTPRB, Length 5,839 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-204ENST00000538708 TRAF6Q9Y4K3 522 aa9.35□□□□□ -0.91
PTPRB-204ENST00000538708 HS3ST4Q9Y661 456 aa9.35□□□□□ -0.91
PTPRB-204ENST00000538708 DOT1LQ8TEK3 1739 aa9.35□□□□□ -0.91
PTPRB-204ENST00000538708 FAM237AA0A1B0GTK4 181 aa9.35□□□□□ -0.91
PTPRB-204ENST00000538708 VSTM5A8MXK1 200 aa9.35□□□□□ -0.91
PTPRB-204ENST00000538708 PI15O43692 258 aa9.35□□□□□ -0.91
PTPRB-204ENST00000538708 KLHL18O94889 574 aa9.35□□□□□ -0.91
PTPRB-204ENST00000538708 SHBGP04278 402 aa9.35□□□□□ -0.91
PTPRB-204ENST00000538708 CYBAP13498 195 aa9.35□□□□□ -0.91
PTPRB-204ENST00000538708 ACADSP16219 412 aa9.35□□□□□ -0.91
PTPRB-204ENST00000538708 NCBP2P52298 156 aaKnown RBP eCLIP9.35□□□□□ -0.91
PTPRB-204ENST00000538708 BTN3A2P78410 334 aa9.35□□□□□ -0.91
PTPRB-204ENST00000538708 POU5F1Q01860 360 aaKnown RBP9.35□□□□□ -0.91
PTPRB-204ENST00000538708 NRG1Q02297 640 aaPredicted RBP9.35□□□□□ -0.91
PTPRB-204ENST00000538708 ENPEPQ07075 957 aa9.35□□□□□ -0.91
PTPRB-204ENST00000538708 KRR1Q13601 381 aaKnown RBP9.35□□□□□ -0.91
PTPRB-204ENST00000538708 CAMK1Q14012 370 aa9.35□□□□□ -0.91
PTPRB-204ENST00000538708 PDSS1Q5T2R2 415 aa9.35□□□□□ -0.91
PTPRB-204ENST00000538708 PDZK1Q5T2W1 519 aa9.35□□□□□ -0.91
PTPRB-204ENST00000538708 ATCAYQ86WG3 371 aa9.35□□□□□ -0.91
PTPRB-204ENST00000538708 CAMKVQ8NCB2 501 aa9.35□□□□□ -0.91
PTPRB-204ENST00000538708 NXNL1Q96CM4 212 aa9.35□□□□□ -0.91
PTPRB-204ENST00000538708 HIC2Q96JB3 615 aa9.35□□□□□ -0.91
PTPRB-204ENST00000538708 GPER1Q99527 375 aa9.35□□□□□ -0.91
PTPRB-204ENST00000538708 ANKZF1Q9H8Y5 726 aa9.35□□□□□ -0.91
PTPRB-204ENST00000538708 ZNF304Q9HCX3 659 aa9.35□□□□□ -0.91
PTPRB-204ENST00000538708 SPHK2Q9NRA0 654 aa9.35□□□□□ -0.91
PTPRB-204ENST00000538708 PIAS3Q9Y6X2 628 aa9.35□□□□□ -0.91
PTPRB-204ENST00000538708 ATP6AP2A0A1C7CYW4 349 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 VGLL3A8MV65 326 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 TP73O15350 636 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 BIRC5O15392 142 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 TLX3O43711 291 aaPredicted RBP9.34□□□□□ -0.91
PTPRB-204ENST00000538708 KDELR3O43731 214 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 MTX2O75431 263 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 ATP6AP2O75787 350 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 ZNF865P0CJ78 1059 aaPredicted RBP9.34□□□□□ -0.91
PTPRB-204ENST00000538708 COX4I1P13073 169 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 TYRP1P17643 537 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 BDKRB1P46663 353 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 KHKP50053 298 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 TNK2Q07912 1038 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 HYAL2Q12891 473 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 FOXR2Q6PJQ5 311 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 FNIP1Q8TF40 1166 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 CDCA3Q99618 268 aaPredicted RBP9.34□□□□□ -0.91
PTPRB-204ENST00000538708 SPAG4Q9NPE6 437 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 CNOT6Q9ULM6 557 aaKnown RBP9.34□□□□□ -0.91
PTPRB-204ENST00000538708 FSCN2O14926 492 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 AP5Z1O43299 807 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 NBNO60934 754 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 STX11O75558 287 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 CLEC3AO75596 197 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 LYPLA1O75608 230 aaPredicted RBP9.34□□□□□ -0.91
PTPRB-204ENST00000538708 ESR1P03372 595 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 PROCP04070 461 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 ATP1B2P14415 290 aaPredicted RBP9.34□□□□□ -0.91
PTPRB-204ENST00000538708 RPS21P63220 83 aaKnown RBP9.34□□□□□ -0.91
PTPRB-204ENST00000538708 TRMT5Q32P41 509 aaKnown RBP9.34□□□□□ -0.91
PTPRB-204ENST00000538708 FBXO48Q5FWF7 155 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 MS4A13Q5J8X5 152 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 TOR1AIP1Q5JTV8 583 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 CDCA2Q69YH5 1023 aaPredicted RBP9.34□□□□□ -0.91
PTPRB-204ENST00000538708 TCEAL6Q6IPX3 200 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 RANBP3LQ86VV4 465 aaPredicted RBP9.34□□□□□ -0.91
PTPRB-204ENST00000538708 PROSER1Q86XN7 944 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 CREG2Q8IUH2 290 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 PLA2G15Q8NCC3 412 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 PIWIL2Q8TC59 973 aaKnown RBP9.34□□□□□ -0.91
PTPRB-204ENST00000538708 GPR151Q8TDV0 419 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 SERINC1Q9NRX5 453 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 PTGFRNQ9P2B2 879 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 SQORQ9Y6N5 450 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 DGKBQ9Y6T7 804 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 CHD2O14647 1828 aaKnown RBP9.34□□□□□ -0.91
PTPRB-204ENST00000538708 DCLK1O15075 740 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 CLOCKO15516 846 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 PDPK1O15530 556 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 RNGTTO60942 597 aaKnown RBP9.34□□□□□ -0.91
PTPRB-204ENST00000538708 ZMPSTE24O75844 475 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 CST1P01037 141 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 RYKP34925 604 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 ITGA1P56199 1179 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 CSTF1Q05048 431 aaKnown RBP9.34□□□□□ -0.91
PTPRB-204ENST00000538708 C17orf99Q6UX52 265 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 OSTM1Q86WC4 334 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 CPNE9Q8IYJ1 553 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 PRELID2Q8N945 189 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 OR5M3Q8NGP4 307 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 OR2AJ1Q8NGZ0 328 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 FAM83CQ9BQN1 747 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 C6orf62Q9GZU0 229 aaPredicted RBP9.34□□□□□ -0.91
PTPRB-204ENST00000538708 PLAGL1Q9UM63 463 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 IQCMA0A1B0GVH7 501 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 PTGES3LE9PB15 166 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 H0YGN5 161 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 STATHP02808 62 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 JUPP14923 745 aa9.34□□□□□ -0.91
PTPRB-204ENST00000538708 ZNF37AP17032 561 aaPredicted RBP9.34□□□□□ -0.91
PTPRB-204ENST00000538708 C4BPBP20851 252 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms