RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 N4BP2L1Q5TBK1 243 aaPredicted RBP16.96■□□□□ 0.31
CLN6-202ENST00000538696 C16orf46Q6P387 395 aa16.96■□□□□ 0.31
CLN6-202ENST00000538696 SLC23A3Q6PIS1 610 aa16.96■□□□□ 0.31
CLN6-202ENST00000538696 DET1Q7L5Y6 550 aa16.96■□□□□ 0.31
CLN6-202ENST00000538696 PARGQ86W56 976 aa16.96■□□□□ 0.31
CLN6-202ENST00000538696 RBFAQ8N0V3 343 aa16.96■□□□□ 0.31
CLN6-202ENST00000538696 PLD6Q8N2A8 252 aaKnown RBP16.96■□□□□ 0.31
CLN6-202ENST00000538696 HEXDCQ8WVB3 486 aa16.96■□□□□ 0.31
CLN6-202ENST00000538696 SCG3Q8WXD2 468 aaKnown RBP16.96■□□□□ 0.31
CLN6-202ENST00000538696 SKA1Q96BD8 255 aa16.96■□□□□ 0.31
CLN6-202ENST00000538696 CABS1Q96KC9 395 aa16.96■□□□□ 0.31
CLN6-202ENST00000538696 TCF12Q99081 682 aa16.96■□□□□ 0.31
CLN6-202ENST00000538696 ZCCHC2Q9C0B9 1178 aaKnown RBP16.96■□□□□ 0.31
CLN6-202ENST00000538696 RABEP2Q9H5N1 569 aa16.96■□□□□ 0.31
CLN6-202ENST00000538696 CCDC134Q9H6E4 229 aa16.96■□□□□ 0.31
CLN6-202ENST00000538696 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.96■□□□□ 0.31
CLN6-202ENST00000538696 GMEB2Q9UKD1 530 aa16.96■□□□□ 0.31
CLN6-202ENST00000538696 EMCNQ9ULC0 261 aa16.96■□□□□ 0.31
CLN6-202ENST00000538696 SNX11Q9Y5W9 270 aa16.96■□□□□ 0.31
CLN6-202ENST00000538696 PRSS21Q9Y6M0 314 aa16.96■□□□□ 0.31
CLN6-202ENST00000538696 PRSS38A1L453 326 aa16.96■□□□□ 0.3
CLN6-202ENST00000538696 TNFRSF10CO14798 259 aa16.96■□□□□ 0.3
CLN6-202ENST00000538696 SGTAO43765 313 aa16.96■□□□□ 0.3
CLN6-202ENST00000538696 NUAK1O60285 661 aa16.96■□□□□ 0.3
CLN6-202ENST00000538696 CDK14O94921 469 aa16.96■□□□□ 0.3
CLN6-202ENST00000538696 SLC35E2BP0CK96 405 aa16.96■□□□□ 0.3
CLN6-202ENST00000538696 STMN1P16949 149 aa16.96■□□□□ 0.3
CLN6-202ENST00000538696 CCT5P48643 541 aa16.96■□□□□ 0.3
CLN6-202ENST00000538696 CTSCP53634 463 aa16.96■□□□□ 0.3
CLN6-202ENST00000538696 SEC24CP53992 1094 aa16.96■□□□□ 0.3
CLN6-202ENST00000538696 CDKN2DP55273 166 aa16.96■□□□□ 0.3
CLN6-202ENST00000538696 SRP54P61011 504 aaKnown RBP16.96■□□□□ 0.3
CLN6-202ENST00000538696 IL9RQ01113 521 aa16.96■□□□□ 0.3
CLN6-202ENST00000538696 GRIK2Q13002 908 aa16.96■□□□□ 0.3
CLN6-202ENST00000538696 GTF2H3Q13889 308 aa16.96■□□□□ 0.3
CLN6-202ENST00000538696 TAF1BQ53T94 588 aaPredicted RBP16.96■□□□□ 0.3
CLN6-202ENST00000538696 RNF187Q5TA31 235 aaPredicted RBP16.96■□□□□ 0.3
CLN6-202ENST00000538696 RAPH1Q70E73 1250 aa16.96■□□□□ 0.3
CLN6-202ENST00000538696 ARMC2Q8NEN0 867 aa16.96■□□□□ 0.3
CLN6-202ENST00000538696 TSACCQ96A04 125 aaPredicted RBP16.96■□□□□ 0.3
CLN6-202ENST00000538696 DCUN1D1Q96GG9 259 aa16.96■□□□□ 0.3
CLN6-202ENST00000538696 SCARF2Q96GP6 870 aaPredicted RBP16.96■□□□□ 0.3
CLN6-202ENST00000538696 TTC1Q99614 292 aa16.96■□□□□ 0.3
CLN6-202ENST00000538696 AARSD1Q9BTE6 412 aaKnown RBP16.96■□□□□ 0.3
CLN6-202ENST00000538696 P2RY12Q9H244 342 aa16.96■□□□□ 0.3
CLN6-202ENST00000538696 ZNF358Q9NW07 568 aa16.96■□□□□ 0.3
CLN6-202ENST00000538696 KLF15Q9UIH9 416 aa16.96■□□□□ 0.3
CLN6-202ENST00000538696 CORO1CQ9ULV4 474 aaPredicted RBP16.96■□□□□ 0.3
CLN6-202ENST00000538696 SUFUQ9UMX1 484 aa16.96■□□□□ 0.3
CLN6-202ENST00000538696 SLC6A14Q9UN76 642 aa16.96■□□□□ 0.3
CLN6-202ENST00000538696 UBA6A0AVT1 1052 aaPredicted RBP16.95■□□□□ 0.3
CLN6-202ENST00000538696 WDR91A4D1P6 747 aa16.95■□□□□ 0.3
CLN6-202ENST00000538696 CFAP99D6REC4 459 aa16.95■□□□□ 0.3
CLN6-202ENST00000538696 CHUKO15111 745 aa16.95■□□□□ 0.3
CLN6-202ENST00000538696 SCAMP1O15126 338 aa16.95■□□□□ 0.3
CLN6-202ENST00000538696 LMNAP02545 664 aaKnown RBP16.95■□□□□ 0.3
CLN6-202ENST00000538696 RALBP11234 206 aa16.95■□□□□ 0.3
CLN6-202ENST00000538696 ATP1B2P14415 290 aaPredicted RBP16.95■□□□□ 0.3
CLN6-202ENST00000538696 ZNF7P17097 686 aaPredicted RBP16.95■□□□□ 0.3
CLN6-202ENST00000538696 FDXRP22570 491 aa16.95■□□□□ 0.3
CLN6-202ENST00000538696 RPS3P23396 243 aaKnown RBP eCLIP16.95■□□□□ 0.3
CLN6-202ENST00000538696 CRABP2P29373 138 aa16.95■□□□□ 0.3
CLN6-202ENST00000538696 FMO4P31512 558 aa16.95■□□□□ 0.3
CLN6-202ENST00000538696 PPARGP37231 505 aaPredicted RBP16.95■□□□□ 0.3
CLN6-202ENST00000538696 NSG1P42857 185 aa16.95■□□□□ 0.3
CLN6-202ENST00000538696 SLC12A2P55011 1212 aa16.95■□□□□ 0.3
CLN6-202ENST00000538696 IRX4P78413 519 aa16.95■□□□□ 0.3
CLN6-202ENST00000538696 INSCQ1MX18 579 aa16.95■□□□□ 0.3
CLN6-202ENST00000538696 ZNF542PQ5EBM4 170 aa16.95■□□□□ 0.3
CLN6-202ENST00000538696 TCEAL6Q6IPX3 200 aa16.95■□□□□ 0.3
CLN6-202ENST00000538696 FAM45BPQ6NSW5 357 aa16.95■□□□□ 0.3
CLN6-202ENST00000538696 CRTC3Q6UUV7 619 aa16.95■□□□□ 0.3
CLN6-202ENST00000538696 ZNF547Q8IVP9 402 aa16.95■□□□□ 0.3
CLN6-202ENST00000538696 FAM45AQ8TCE6 357 aa16.95■□□□□ 0.3
CLN6-202ENST00000538696 KCTD4Q8WVF5 259 aa16.95■□□□□ 0.3
CLN6-202ENST00000538696 TCEAL3Q969E4 200 aa16.95■□□□□ 0.3
CLN6-202ENST00000538696 MAGEB18Q96M61 343 aa16.95■□□□□ 0.3
CLN6-202ENST00000538696 TCEAL2Q9H3H9 227 aaPredicted RBP16.95■□□□□ 0.3
CLN6-202ENST00000538696 RMI1Q9H9A7 625 aa16.95■□□□□ 0.3
CLN6-202ENST00000538696 CYP4F12Q9HCS2 524 aa16.95■□□□□ 0.3
CLN6-202ENST00000538696 TMEM216Q9P0N5 145 aa16.95■□□□□ 0.3
CLN6-202ENST00000538696 DCDC2Q9UHG0 476 aa16.95■□□□□ 0.3
CLN6-202ENST00000538696 RAPGEFL1Q9UHV5 662 aa16.95■□□□□ 0.3
CLN6-202ENST00000538696 MOSPD1Q9UJG1 213 aa16.95■□□□□ 0.3
CLN6-202ENST00000538696 TLK1Q9UKI8 766 aa16.95■□□□□ 0.3
CLN6-202ENST00000538696 VWA7Q9Y334 891 aa16.95■□□□□ 0.3
CLN6-202ENST00000538696 OTOGLQ3ZCN5 2332 aa16.94■□□□□ 0.3
CLN6-202ENST00000538696 OR2AG2A6NM03 316 aa16.94■□□□□ 0.3
CLN6-202ENST00000538696 SRRM3A6NNA2 597 aaPredicted RBP16.94■□□□□ 0.3
CLN6-202ENST00000538696 GPR89AB7ZAQ6 455 aa16.94■□□□□ 0.3
CLN6-202ENST00000538696 PRMT5O14744 637 aaPredicted RBP16.94■□□□□ 0.3
CLN6-202ENST00000538696 PLIN3O60664 434 aa16.94■□□□□ 0.3
CLN6-202ENST00000538696 RASGRP1O95267 797 aa16.94■□□□□ 0.3
CLN6-202ENST00000538696 WISP3O95389 354 aaPredicted RBP16.94■□□□□ 0.3
CLN6-202ENST00000538696 PROCP04070 461 aa16.94■□□□□ 0.3
CLN6-202ENST00000538696 GPR89BP0CG08 455 aa16.94■□□□□ 0.3
CLN6-202ENST00000538696 GNPDA1P46926 289 aa16.94■□□□□ 0.3
CLN6-202ENST00000538696 SERPINB4P48594 390 aa16.94■□□□□ 0.3
CLN6-202ENST00000538696 TIAL1Q01085 375 aaKnown RBP eCLIP16.94■□□□□ 0.3
CLN6-202ENST00000538696 ILF2Q12905 390 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms