RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 METTL15A6NJ78 407 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 FAM170BA6NMN3 283 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 KIAA1324LA8MWY0 1029 aaPredicted RBP6.62□□□□□ -1.35
USP28-207ENST00000538475 H0Y858 1186 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 SLC1A7O00341 560 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 OGTO15294 1046 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 TMCC2O75069 709 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 EEDO75530 441 aaKnown RBP6.62□□□□□ -1.35
USP28-207ENST00000538475 IPO13O94829 963 aaKnown RBP6.62□□□□□ -1.35
USP28-207ENST00000538475 KCNK2O95069 426 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 STBD1O95210 358 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 ICAM1P05362 532 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 SBK3P0C264 359 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 FOSL1P15407 271 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 ARL4AP40617 200 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 TPD52P55327 224 aaPredicted RBP6.62□□□□□ -1.35
USP28-207ENST00000538475 RAB25P57735 213 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 OR2B6P58173 313 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 RAB10P61026 200 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 ISL1P61371 349 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 PPP2R2BQ00005 443 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 TEKQ02763 1124 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 CHRNB3Q05901 458 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 PTPN11Q06124 597 aaPredicted RBP6.62□□□□□ -1.35
USP28-207ENST00000538475 RALGDSQ12967 914 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 TRAF3Q13114 568 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 KEAP1Q14145 624 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 SLC14A2Q15849 920 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 KYAT1Q16773 422 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 FAM83EQ2M2I3 478 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 ZNF699Q32M78 642 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 ADPRMQ3LIE5 342 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 CRY2Q49AN0 593 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 ESCO2Q56NI9 601 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 ZNF667Q5HYK9 610 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 AGAP9Q5VTM2 703 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 ZNF691Q5VV52 312 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 ZNF470Q6ECI4 717 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 FAM122CQ6P4D5 195 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 LCLAT1Q6UWP7 414 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 CCBE1Q6UXH8 406 aaPredicted RBP6.62□□□□□ -1.35
USP28-207ENST00000538475 SCARA5Q6ZMJ2 495 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 BRINP3Q76B58 766 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 STRADAQ7RTN6 431 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 PAGE2Q7Z2X7 111 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 CMC1Q7Z7K0 106 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 DSG4Q86SJ6 1040 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 KCNMB4Q86W47 210 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 HIPK1Q86Z02 1210 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 SPPL2CQ8IUH8 684 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 CCDC103Q8IW40 242 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 OFCC1Q8IZS5 231 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 SHISA5Q8N114 240 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 FSTL5Q8N475 847 aaPredicted RBP6.62□□□□□ -1.35
USP28-207ENST00000538475 TMEM199Q8N511 208 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 DPP10Q8N608 796 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 ST13P5Q8NFI4 369 aaPredicted RBP6.62□□□□□ -1.35
USP28-207ENST00000538475 GPBAR1Q8TDU6 330 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 FAR1Q8WVX9 515 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 JPH3Q8WXH2 748 aaPredicted RBP6.62□□□□□ -1.35
USP28-207ENST00000538475 RPL3LQ92901 407 aaKnown RBP6.62□□□□□ -1.35
USP28-207ENST00000538475 TMEM125Q96AQ2 219 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 ZNF669Q96BR6 464 aaPredicted RBP6.62□□□□□ -1.35
USP28-207ENST00000538475 NXNL1Q96CM4 212 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 LGALS12Q96DT0 336 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 ZHX1-C8orf76Q96EF9 292 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 MARK4Q96L34 752 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 NSMCE2Q96MF7 247 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 GPR78Q96P69 363 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 GDF15Q99988 308 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 KCTD14Q9BQ13 255 aaPredicted RBP6.62□□□□□ -1.35
USP28-207ENST00000538475 SNRNP25Q9BV90 132 aaKnown RBP6.62□□□□□ -1.35
USP28-207ENST00000538475 TEX13BQ9BXU2 312 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 PORCNQ9H237 461 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 ADNPQ9H2P0 1102 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 DHX35Q9H5Z1 703 aaKnown RBP6.62□□□□□ -1.35
USP28-207ENST00000538475 MAGIXQ9H6Y5 334 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 NIPAL2Q9H841 368 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 GBA2Q9HCG7 927 aaPredicted RBP6.62□□□□□ -1.35
USP28-207ENST00000538475 PCDH12Q9NPG4 1184 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 TLR9Q9NR96 1032 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 SDR39U1Q9NRG7 319 aaPredicted RBP6.62□□□□□ -1.35
USP28-207ENST00000538475 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.62□□□□□ -1.35
USP28-207ENST00000538475 COMMD8Q9NX08 183 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 B3GNT2Q9NY97 397 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 CCDC167Q9P0B6 97 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 LEF1Q9UJU2 399 aaPredicted RBP6.62□□□□□ -1.35
USP28-207ENST00000538475 INTS6Q9UL03 887 aaKnown RBP6.62□□□□□ -1.35
USP28-207ENST00000538475 VANGL2Q9ULK5 521 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.62□□□□□ -1.35
USP28-207ENST00000538475 JAG2Q9Y219 1238 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 SPEF1Q9Y4P9 236 aa6.62□□□□□ -1.35
USP28-207ENST00000538475 MYLKQ15746 1914 aa6.61□□□□□ -1.35
USP28-207ENST00000538475 A0A0J9YYE9 177 aa6.61□□□□□ -1.35
USP28-207ENST00000538475 UNCXA6NJT0 531 aa6.61□□□□□ -1.35
USP28-207ENST00000538475 FXYD1O00168 92 aa6.61□□□□□ -1.35
USP28-207ENST00000538475 INPP4BO15327 924 aa6.61□□□□□ -1.35
USP28-207ENST00000538475 STX7O15400 261 aaKnown RBP6.61□□□□□ -1.35
USP28-207ENST00000538475 TSPAN1O60635 241 aa6.61□□□□□ -1.35
USP28-207ENST00000538475 PAGE1O75459 146 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms