RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 CD53P19397 219 aa9.18□□□□□ -0.94
CPSF7-217ENST00000537162 SOX11P35716 441 aa9.18□□□□□ -0.94
CPSF7-217ENST00000537162 CLCNKAP51800 687 aa9.18□□□□□ -0.94
CPSF7-217ENST00000537162 KPNA2P52292 529 aaKnown RBP9.18□□□□□ -0.94
CPSF7-217ENST00000537162 DCAF7P61962 342 aa9.18□□□□□ -0.94
CPSF7-217ENST00000537162 POLR2LP62875 67 aaKnown RBP9.18□□□□□ -0.94
CPSF7-217ENST00000537162 SRSF2Q01130 221 aaKnown RBP9.18□□□□□ -0.94
CPSF7-217ENST00000537162 SLC6A3Q01959 620 aa9.18□□□□□ -0.94
CPSF7-217ENST00000537162 CACNG1Q06432 222 aa9.18□□□□□ -0.94
CPSF7-217ENST00000537162 PCBP2Q15366 365 aaKnown RBP eCLIP9.18□□□□□ -0.941e-6■■■■□ 24.4
CPSF7-217ENST00000537162 NFIL3Q16649 462 aa9.18□□□□□ -0.94
CPSF7-217ENST00000537162 TMTC4Q5T4D3 741 aa9.18□□□□□ -0.94
CPSF7-217ENST00000537162 CENPQQ7L2Z9 268 aaPredicted RBP9.18□□□□□ -0.94
CPSF7-217ENST00000537162 BRAPQ7Z569 592 aa9.18□□□□□ -0.94
CPSF7-217ENST00000537162 PASD1Q8IV76 773 aa9.18□□□□□ -0.94
CPSF7-217ENST00000537162 PPM1KQ8N3J5 372 aa9.18□□□□□ -0.94
CPSF7-217ENST00000537162 CPLX3Q8WVH0 158 aa9.18□□□□□ -0.94
CPSF7-217ENST00000537162 ZNF606Q8WXB4 792 aa9.18□□□□□ -0.94
CPSF7-217ENST00000537162 NACC2Q96BF6 587 aa9.18□□□□□ -0.94
CPSF7-217ENST00000537162 RIOK2Q9BVS4 552 aaKnown RBP9.18□□□□□ -0.94
CPSF7-217ENST00000537162 C19orf24Q9BVV8 132 aa9.18□□□□□ -0.94
CPSF7-217ENST00000537162 SLC7A5P2Q9GIP4 190 aa9.18□□□□□ -0.94
CPSF7-217ENST00000537162 SLC22A11Q9NSA0 550 aa9.18□□□□□ -0.94
CPSF7-217ENST00000537162 KCTD5Q9NXV2 234 aa9.18□□□□□ -0.94
CPSF7-217ENST00000537162 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.18□□□□□ -0.945e-9■■□□□ 12.4
CPSF7-217ENST00000537162 IFT80Q9P2H3 777 aaPredicted RBP9.18□□□□□ -0.94
CPSF7-217ENST00000537162 CDC23Q9UJX2 597 aa9.18□□□□□ -0.94
CPSF7-217ENST00000537162 NPIPA1Q9UND3 350 aa9.18□□□□□ -0.94
CPSF7-217ENST00000537162 DNAJC16Q9Y2G8 782 aa9.18□□□□□ -0.94
CPSF7-217ENST00000537162 WDR37Q9Y2I8 494 aa9.18□□□□□ -0.94
CPSF7-217ENST00000537162 ASB1Q9Y576 335 aa9.18□□□□□ -0.94
CPSF7-217ENST00000537162 ADGRG1Q9Y653 693 aa9.18□□□□□ -0.94
CPSF7-217ENST00000537162 A6NNC1 897 aa9.17□□□□□ -0.94
CPSF7-217ENST00000537162 PDZK1P1A8MUH7 402 aa9.17□□□□□ -0.94
CPSF7-217ENST00000537162 PMPCBO75439 489 aa9.17□□□□□ -0.94
CPSF7-217ENST00000537162 WDPCPO95876 746 aa9.17□□□□□ -0.94
CPSF7-217ENST00000537162 IFNA2P01563 188 aa9.17□□□□□ -0.94
CPSF7-217ENST00000537162 CTSBP07858 339 aa9.17□□□□□ -0.94
CPSF7-217ENST00000537162 ZNF8P17098 575 aaPredicted RBP9.17□□□□□ -0.94
CPSF7-217ENST00000537162 CTPS1P17812 591 aa9.17□□□□□ -0.94
CPSF7-217ENST00000537162 MMP11P24347 488 aa9.17□□□□□ -0.94
CPSF7-217ENST00000537162 CHRNB4P30926 498 aa9.17□□□□□ -0.94
CPSF7-217ENST00000537162 CSNK1DP48730 415 aa9.17□□□□□ -0.94
CPSF7-217ENST00000537162 ARSEP51690 589 aa9.17□□□□□ -0.94
CPSF7-217ENST00000537162 CTSCP53634 463 aa9.17□□□□□ -0.94
CPSF7-217ENST00000537162 ADCY2Q08462 1091 aa9.17□□□□□ -0.94
CPSF7-217ENST00000537162 DCAF17Q5H9S7 520 aaPredicted RBP9.17□□□□□ -0.94
CPSF7-217ENST00000537162 TCERG1LQ5VWI1 586 aa9.17□□□□□ -0.94
CPSF7-217ENST00000537162 SMYD5Q6GMV2 418 aa9.17□□□□□ -0.94
CPSF7-217ENST00000537162 TRIM72Q6ZMU5 477 aa9.17□□□□□ -0.94
CPSF7-217ENST00000537162 BNIPLQ7Z465 357 aa9.17□□□□□ -0.94
CPSF7-217ENST00000537162 SIRT6Q8N6T7 355 aa9.17□□□□□ -0.94
CPSF7-217ENST00000537162 C3orf20Q8ND61 904 aa9.17□□□□□ -0.94
CPSF7-217ENST00000537162 ZNF397Q8NF99 534 aaPredicted RBP9.17□□□□□ -0.94
CPSF7-217ENST00000537162 EXD1Q8NHP7 514 aa9.17□□□□□ -0.94
CPSF7-217ENST00000537162 ASB5Q8WWX0 329 aa9.17□□□□□ -0.94
CPSF7-217ENST00000537162 CXorf40BQ96DE9 158 aa9.17□□□□□ -0.94
CPSF7-217ENST00000537162 KREMEN1Q96MU8 473 aa9.17□□□□□ -0.94
CPSF7-217ENST00000537162 WDR24Q96S15 920 aa9.17□□□□□ -0.94
CPSF7-217ENST00000537162 CRIM1Q9NZV1 1036 aa9.17□□□□□ -0.94
CPSF7-217ENST00000537162 ATXN10Q9UBB4 475 aa9.17□□□□□ -0.94
CPSF7-217ENST00000537162 NDOR1Q9UHB4 597 aa9.17□□□□□ -0.94
CPSF7-217ENST00000537162 NOCTQ9UK39 431 aaKnown RBP9.17□□□□□ -0.94
CPSF7-217ENST00000537162 NOTCH1P46531 2555 aa9.17□□□□□ -0.94
CPSF7-217ENST00000537162 OR5K3A6NET4 321 aa9.16□□□□□ -0.94
CPSF7-217ENST00000537162 FADS2P1A8MWK0 482 aa9.16□□□□□ -0.94
CPSF7-217ENST00000537162 PSMD11O00231 422 aa9.16□□□□□ -0.94
CPSF7-217ENST00000537162 HCRTR1O43613 425 aa9.16□□□□□ -0.94
CPSF7-217ENST00000537162 NUAK1O60285 661 aa9.16□□□□□ -0.94
CPSF7-217ENST00000537162 PRAMEF1O95521 474 aa9.16□□□□□ -0.94
CPSF7-217ENST00000537162 FLT3P36888 993 aa9.16□□□□□ -0.94
CPSF7-217ENST00000537162 SLC25A52Q3SY17 297 aa9.16□□□□□ -0.94
CPSF7-217ENST00000537162 TUBB8Q3ZCM7 444 aa9.16□□□□□ -0.94
CPSF7-217ENST00000537162 PTPN20Q4JDL3 420 aa9.16□□□□□ -0.94
CPSF7-217ENST00000537162 ACBD5Q5T8D3 534 aaPredicted RBP9.16□□□□□ -0.94
CPSF7-217ENST00000537162 CRTC3Q6UUV7 619 aa9.16□□□□□ -0.94
CPSF7-217ENST00000537162 ABRAXAS1Q6UWZ7 409 aa9.16□□□□□ -0.94
CPSF7-217ENST00000537162 NAPRTQ6XQN6 538 aa9.16□□□□□ -0.94
CPSF7-217ENST00000537162 SHISA6Q6ZSJ9 500 aa9.16□□□□□ -0.94
CPSF7-217ENST00000537162 TMTC1Q8IUR5 882 aa9.16□□□□□ -0.94
CPSF7-217ENST00000537162 CLYBLQ8N0X4 340 aa9.16□□□□□ -0.94
CPSF7-217ENST00000537162 IQUBQ8NA54 791 aa9.16□□□□□ -0.94
CPSF7-217ENST00000537162 ANKRD20A12PQ8NF67 263 aa9.16□□□□□ -0.94
CPSF7-217ENST00000537162 OR11G2Q8NGC1 345 aa9.16□□□□□ -0.94
CPSF7-217ENST00000537162 BRIX1Q8TDN6 353 aaKnown RBP9.16□□□□□ -0.94
CPSF7-217ENST00000537162 CFAP57Q96MR6 1250 aa9.16□□□□□ -0.94
CPSF7-217ENST00000537162 CD180Q99467 661 aa9.16□□□□□ -0.94
CPSF7-217ENST00000537162 TRIM51Q9BSJ1 452 aa9.16□□□□□ -0.94
CPSF7-217ENST00000537162 BDH2Q9BUT1 245 aa9.16□□□□□ -0.94
CPSF7-217ENST00000537162 PLEKHF2Q9H8W4 249 aa9.16□□□□□ -0.94
CPSF7-217ENST00000537162 FANCEQ9HB96 536 aa9.16□□□□□ -0.94
CPSF7-217ENST00000537162 METTL14Q9HCE5 456 aaKnown RBP9.16□□□□□ -0.94
CPSF7-217ENST00000537162 EXOC1Q9NV70 894 aa9.16□□□□□ -0.94
CPSF7-217ENST00000537162 HRASLS2Q9NWW9 162 aa9.16□□□□□ -0.94
CPSF7-217ENST00000537162 DTLQ9NZJ0 730 aa9.16□□□□□ -0.94
CPSF7-217ENST00000537162 DHCR7Q9UBM7 475 aaKnown RBP9.16□□□□□ -0.94
CPSF7-217ENST00000537162 APEX2Q9UBZ4 518 aa9.16□□□□□ -0.94
CPSF7-217ENST00000537162 ADGRE2Q9UHX3 823 aa9.16□□□□□ -0.94
CPSF7-217ENST00000537162 E7EQ34 232 aa9.15□□□□□ -0.94
CPSF7-217ENST00000537162 H3BMH7 237 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms