RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 OR8K5Q8NH50 307 aa4.34□□□□□ -1.71
CCDC7-208ENST00000537047 CWC15Q9P013 229 aaKnown RBP4.34□□□□□ -1.71
CCDC7-208ENST00000537047 RCC2Q9P258 522 aaKnown RBP4.34□□□□□ -1.71
CCDC7-208ENST00000537047 UBA2Q9UBT2 640 aaPredicted RBP4.34□□□□□ -1.71
CCDC7-208ENST00000537047 KLK13Q9UKR3 277 aa4.34□□□□□ -1.71
CCDC7-208ENST00000537047 IGHV4-61A0A0C4DH41 118 aa4.33□□□□□ -1.72
CCDC7-208ENST00000537047 RRN3P2A6NIE6 340 aa4.33□□□□□ -1.72
CCDC7-208ENST00000537047 IGHV4-59P01825 116 aa4.33□□□□□ -1.72
CCDC7-208ENST00000537047 TLX1P31314 330 aaPredicted RBP4.33□□□□□ -1.72
CCDC7-208ENST00000537047 PBX3P40426 434 aa4.33□□□□□ -1.72
CCDC7-208ENST00000537047 ARL1P40616 181 aaPredicted RBP4.33□□□□□ -1.72
CCDC7-208ENST00000537047 RARSP54136 660 aaKnown RBP4.33□□□□□ -1.72
CCDC7-208ENST00000537047 TAS2R40P59535 323 aa4.33□□□□□ -1.72
CCDC7-208ENST00000537047 MRPS34P82930 218 aaKnown RBP4.33□□□□□ -1.72
CCDC7-208ENST00000537047 RRS1Q15050 365 aaKnown RBP4.33□□□□□ -1.72
CCDC7-208ENST00000537047 IL27RAQ6UWB1 636 aa4.33□□□□□ -1.72
CCDC7-208ENST00000537047 CEP97Q8IW35 865 aa4.33□□□□□ -1.72
CCDC7-208ENST00000537047 KBTBD8Q8NFY9 601 aa4.33□□□□□ -1.72
CCDC7-208ENST00000537047 OR2T11Q8NH01 316 aa4.33□□□□□ -1.72
CCDC7-208ENST00000537047 ZFAND2BQ8WV99 257 aa4.33□□□□□ -1.72
CCDC7-208ENST00000537047 INTS12Q96CB8 462 aaKnown RBP4.33□□□□□ -1.72
CCDC7-208ENST00000537047 WDFY2Q96P53 400 aa4.33□□□□□ -1.72
CCDC7-208ENST00000537047 TMEM39BQ9GZU3 492 aa4.33□□□□□ -1.72
CCDC7-208ENST00000537047 POLR1BQ9H9Y6 1135 aa4.33□□□□□ -1.72
CCDC7-208ENST00000537047 EPB41L5Q9HCM4 733 aa4.33□□□□□ -1.72
CCDC7-208ENST00000537047 PRR34Q9NV39 138 aa4.33□□□□□ -1.72
CCDC7-208ENST00000537047 LRWD1Q9UFC0 647 aa4.33□□□□□ -1.72
CCDC7-208ENST00000537047 FBXW11Q9UKB1 542 aa4.33□□□□□ -1.72
CCDC7-208ENST00000537047 DGKBQ9Y6T7 804 aa4.33□□□□□ -1.72
CCDC7-208ENST00000537047 ZNF318Q5VUA4 2279 aa4.32□□□□□ -1.72
CCDC7-208ENST00000537047 A0A1W2PRG0 241 aa4.32□□□□□ -1.72
CCDC7-208ENST00000537047 SLCO1B7G3V0H7 640 aa4.32□□□□□ -1.72
CCDC7-208ENST00000537047 ACP2P11117 423 aa4.32□□□□□ -1.72
CCDC7-208ENST00000537047 HSD3B1P14060 373 aa4.32□□□□□ -1.72
CCDC7-208ENST00000537047 OLR1P78380 273 aa4.32□□□□□ -1.72
CCDC7-208ENST00000537047 ZNF534Q76KX8 674 aa4.32□□□□□ -1.72
CCDC7-208ENST00000537047 FASTKD5Q7L8L6 764 aaKnown RBP4.32□□□□□ -1.72
CCDC7-208ENST00000537047 CDC20BQ86Y33 519 aa4.32□□□□□ -1.72
CCDC7-208ENST00000537047 PERPQ96FX8 193 aa4.32□□□□□ -1.72
CCDC7-208ENST00000537047 FOXN4Q96NZ1 517 aa4.32□□□□□ -1.72
CCDC7-208ENST00000537047 RANBP17Q9H2T7 1088 aaKnown RBP4.32□□□□□ -1.72
CCDC7-208ENST00000537047 INTS9Q9NV88 658 aaKnown RBP4.32□□□□□ -1.72
CCDC7-208ENST00000537047 TSPYL4Q9UJ04 414 aa4.32□□□□□ -1.72
CCDC7-208ENST00000537047 TDRD15B5MCY1 1934 aaKnown RBP4.31□□□□□ -1.72
CCDC7-208ENST00000537047 NPIPB15A6NHN6 443 aaPredicted RBP4.31□□□□□ -1.72
CCDC7-208ENST00000537047 CDC123O75794 336 aaPredicted RBP4.31□□□□□ -1.72
CCDC7-208ENST00000537047 EDN1P05305 212 aa4.31□□□□□ -1.72
CCDC7-208ENST00000537047 CTU2Q2VPK5 515 aaKnown RBP4.31□□□□□ -1.72
CCDC7-208ENST00000537047 DPCR1Q3MIW9 517 aa4.31□□□□□ -1.72
CCDC7-208ENST00000537047 PAQR6Q6TCH4 344 aa4.31□□□□□ -1.72
CCDC7-208ENST00000537047 HEATR4Q86WZ0 1026 aa4.31□□□□□ -1.72
CCDC7-208ENST00000537047 GSDMBQ8TAX9 411 aa4.31□□□□□ -1.72
CCDC7-208ENST00000537047 PIGQQ9BRB3 760 aa4.31□□□□□ -1.72
CCDC7-208ENST00000537047 PAIP1Q9H074 479 aaKnown RBP4.31□□□□□ -1.72
CCDC7-208ENST00000537047 MIOSQ9NXC5 875 aa4.31□□□□□ -1.72
CCDC7-208ENST00000537047 TAB2Q9NYJ8 693 aa4.31□□□□□ -1.72
CCDC7-208ENST00000537047 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.31□□□□□ -1.72
CCDC7-208ENST00000537047 ARHGAP26Q9UNA1 814 aa4.31□□□□□ -1.72
CCDC7-208ENST00000537047 MAP2K7O14733 419 aa4.3□□□□□ -1.72
CCDC7-208ENST00000537047 SLC25A12O75746 678 aa4.3□□□□□ -1.72
CCDC7-208ENST00000537047 CLDN1O95832 211 aa4.3□□□□□ -1.72
CCDC7-208ENST00000537047 DNAH10OSP0CZ25 163 aa4.3□□□□□ -1.72
CCDC7-208ENST00000537047 UBL4AP11441 157 aa4.3□□□□□ -1.72
CCDC7-208ENST00000537047 CAPN2P17655 700 aa4.3□□□□□ -1.72
CCDC7-208ENST00000537047 INO80CQ6PI98 192 aaPredicted RBP4.3□□□□□ -1.72
CCDC7-208ENST00000537047 TMEM116Q8NCL8 245 aa4.3□□□□□ -1.72
CCDC7-208ENST00000537047 ZKSCAN4Q969J2 545 aaPredicted RBP4.3□□□□□ -1.72
CCDC7-208ENST00000537047 RNF186Q9NXI6 227 aa4.3□□□□□ -1.72
CCDC7-208ENST00000537047 LIMA1Q9UHB6 759 aaKnown RBP4.3□□□□□ -1.72
CCDC7-208ENST00000537047 TP53TG3Q9ULZ0 132 aa4.3□□□□□ -1.72
CCDC7-208ENST00000537047 PYGLP06737 847 aa4.29□□□□□ -1.72
CCDC7-208ENST00000537047 COX10Q12887 443 aa4.29□□□□□ -1.72
CCDC7-208ENST00000537047 CSTF3Q12996 717 aaKnown RBP4.29□□□□□ -1.72
CCDC7-208ENST00000537047 MVPQ14764 893 aaKnown RBP4.29□□□□□ -1.72
CCDC7-208ENST00000537047 GLIPR1L2Q4G1C9 344 aa4.29□□□□□ -1.72
CCDC7-208ENST00000537047 FASTKD1Q53R41 847 aaKnown RBP4.29□□□□□ -1.72
CCDC7-208ENST00000537047 DCAF10Q5QP82 559 aa4.29□□□□□ -1.72
CCDC7-208ENST00000537047 ZNF343Q6P1L6 599 aa4.29□□□□□ -1.72
CCDC7-208ENST00000537047 CYP20A1Q6UW02 462 aa4.29□□□□□ -1.72
CCDC7-208ENST00000537047 DCLK2Q8N568 766 aa4.29□□□□□ -1.72
CCDC7-208ENST00000537047 LINC00612Q8N6U2 182 aa4.29□□□□□ -1.72
CCDC7-208ENST00000537047 L3MBTL4Q8NA19 623 aa4.29□□□□□ -1.72
CCDC7-208ENST00000537047 METTL6Q8TCB7 284 aa4.29□□□□□ -1.72
CCDC7-208ENST00000537047 MAGED4Q96JG8 741 aa4.29□□□□□ -1.72
CCDC7-208ENST00000537047 SEPT5Q99719 369 aaPredicted RBP4.29□□□□□ -1.72
CCDC7-208ENST00000537047 AGXT2Q9BYV1 514 aa4.29□□□□□ -1.72
CCDC7-208ENST00000537047 SLA2Q9H6Q3 261 aa4.29□□□□□ -1.72
CCDC7-208ENST00000537047 SEC14L2O76054 403 aa4.28□□□□□ -1.72
CCDC7-208ENST00000537047 RGS2P41220 211 aa4.28□□□□□ -1.72
CCDC7-208ENST00000537047 ZBED6P86452 979 aa4.28□□□□□ -1.72
CCDC7-208ENST00000537047 CDR2Q01850 454 aa4.28□□□□□ -1.72
CCDC7-208ENST00000537047 LGALS3BPQ08380 585 aa4.28□□□□□ -1.72
CCDC7-208ENST00000537047 GPR17Q13304 367 aa4.28□□□□□ -1.72
CCDC7-208ENST00000537047 CCNG2Q16589 344 aa4.28□□□□□ -1.72
CCDC7-208ENST00000537047 SOWAHCQ53LP3 525 aaPredicted RBP4.28□□□□□ -1.72
CCDC7-208ENST00000537047 TMEM198Q66K66 360 aa4.28□□□□□ -1.72
CCDC7-208ENST00000537047 TRIM65Q6PJ69 517 aa4.28□□□□□ -1.72
CCDC7-208ENST00000537047 CORO6Q6QEF8 472 aa4.28□□□□□ -1.72
CCDC7-208ENST00000537047 GPALPP1Q8IXQ4 340 aa4.28□□□□□ -1.72
CCDC7-208ENST00000537047 HPSE2Q8WWQ2 592 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms