RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 ACVR1Q04771 509 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 CSHL1Q14406 222 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 LIN52Q52LA3 116 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 ZNF789Q5FWF6 425 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 LPCAT4Q643R3 524 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 TMEM198Q66K66 360 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 KLC3Q6P597 504 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 CRTC1Q6UUV9 634 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 Q6ZS52 159 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 CILP2Q8IUL8 1156 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 AFAP1L2Q8N4X5 818 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 EFCAB3Q8N7B9 438 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 CCNYL1Q8N7R7 359 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 DLG3Q92796 817 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 MCCC1Q96RQ3 725 aaPredicted RBP12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 TRMOQ9BU70 441 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 MAGEE1Q9HCI5 957 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 PCDH12Q9NPG4 1184 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 ACSS2Q9NR19 701 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 SLC2A4RGQ9NR83 387 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 NLE1Q9NVX2 485 aaPredicted RBP12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 DUSP12Q9UNI6 340 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 VWA7Q9Y334 891 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 A0A1B0GVG6 124 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 A8MT66 165 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 UPK3BL1B0FP48 263 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 UPK3BL2E5RIL1 263 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 RNASEH1O60930 286 aaKnown RBP12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 RPP40O75818 363 aaKnown RBP12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 TIMP2P16035 220 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 VCLP18206 1134 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 LPOP22079 712 aaPredicted RBP12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 ME2P23368 584 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 PEX2P28328 305 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 TNFRSF4P43489 277 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 CDKN1CP49918 316 aaPredicted RBP12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 CLCN2P51788 898 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 THOP1P52888 689 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 MED21Q13503 144 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 CCINQ13939 588 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 SLC44A4Q53GD3 710 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 HECTD2Q5U5R9 776 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 NXNQ6DKJ4 435 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 BRAT1Q6PJG6 821 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 USP45Q70EL2 814 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 SDCCAG8Q86SQ7 713 aaPredicted RBP12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 ADHFE1Q8IWW8 467 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 SPATA6LQ8N4H0 392 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 DRAXINQ8NBI3 349 aaPredicted RBP12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 RPLP0P6Q8NHW5 317 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 FAM3CQ92520 227 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 SCRN2Q96FV2 425 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 C8orf33Q9H7E9 229 aaPredicted RBP12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 WDR41Q9HAD4 459 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 ZFYVE1Q9HBF4 777 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 HACD3Q9P035 362 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 IL17CQ9P0M4 197 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 SERGEFQ9UGK8 458 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 TRPM6Q9BX84 2022 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 USP34Q70CQ2 3546 aa12.77□□□□□ -0.36
CDK5RAP3-202ENST00000536708 C2orf81A6NN90 581 aa12.77□□□□□ -0.37
CDK5RAP3-202ENST00000536708 GAPDHSO14556 408 aaPredicted RBP12.77□□□□□ -0.37
CDK5RAP3-202ENST00000536708 AP1G1O43747 822 aa12.77□□□□□ -0.37
CDK5RAP3-202ENST00000536708 BCAS2O75934 225 aaPredicted RBP12.77□□□□□ -0.37
CDK5RAP3-202ENST00000536708 S1PR4O95977 384 aa12.77□□□□□ -0.37
CDK5RAP3-202ENST00000536708 PRNPP04156 253 aa12.77□□□□□ -0.37
CDK5RAP3-202ENST00000536708 C1SP09871 688 aa12.77□□□□□ -0.37
CDK5RAP3-202ENST00000536708 CA5AP35218 305 aa12.77□□□□□ -0.37
CDK5RAP3-202ENST00000536708 HMGCLP35914 325 aa12.77□□□□□ -0.37
CDK5RAP3-202ENST00000536708 AQP4P55087 323 aa12.77□□□□□ -0.37
CDK5RAP3-202ENST00000536708 NFKB2Q00653 900 aa12.77□□□□□ -0.37
CDK5RAP3-202ENST00000536708 GRSF1Q12849 480 aaKnown RBP eCLIP12.77□□□□□ -0.37
CDK5RAP3-202ENST00000536708 ART3Q13508 389 aa12.77□□□□□ -0.37
CDK5RAP3-202ENST00000536708 CEACAM7Q14002 265 aa12.77□□□□□ -0.37
CDK5RAP3-202ENST00000536708 MAPRE2Q15555 327 aa12.77□□□□□ -0.37
CDK5RAP3-202ENST00000536708 TRIP10Q15642 601 aa12.77□□□□□ -0.37
CDK5RAP3-202ENST00000536708 NUDT18Q6ZVK8 323 aa12.77□□□□□ -0.37
CDK5RAP3-202ENST00000536708 B4GALNT2Q8NHY0 566 aa12.77□□□□□ -0.37
CDK5RAP3-202ENST00000536708 NAT14Q8WUY8 206 aa12.77□□□□□ -0.37
CDK5RAP3-202ENST00000536708 CCDC97Q96F63 343 aaPredicted RBP12.77□□□□□ -0.37
CDK5RAP3-202ENST00000536708 CDKN2AIPNLQ96HQ2 116 aa12.77□□□□□ -0.37
CDK5RAP3-202ENST00000536708 PPP1R36Q96LQ0 422 aa12.77□□□□□ -0.37
CDK5RAP3-202ENST00000536708 MKRN2Q9H000 416 aaKnown RBP12.77□□□□□ -0.37
CDK5RAP3-202ENST00000536708 MRPL40Q9NQ50 206 aaKnown RBP12.77□□□□□ -0.37
CDK5RAP3-202ENST00000536708 THEGQ9P2T0 379 aa12.77□□□□□ -0.37
CDK5RAP3-202ENST00000536708 RIMKLBQ9ULI2 386 aa12.77□□□□□ -0.37
CDK5RAP3-202ENST00000536708 FAM50BQ9Y247 325 aa12.77□□□□□ -0.37
CDK5RAP3-202ENST00000536708 NCOR1O75376 2440 aa12.77□□□□□ -0.37
CDK5RAP3-202ENST00000536708 A0A1W2PQF6 199 aa12.76□□□□□ -0.37
CDK5RAP3-202ENST00000536708 ACOT8O14734 319 aa12.76□□□□□ -0.37
CDK5RAP3-202ENST00000536708 MID1O15344 667 aa12.76□□□□□ -0.37
CDK5RAP3-202ENST00000536708 STX7O15400 261 aaKnown RBP12.76□□□□□ -0.37
CDK5RAP3-202ENST00000536708 CCDC166P0CW27 439 aa12.76□□□□□ -0.37
CDK5RAP3-202ENST00000536708 HOXB2P14652 356 aa12.76□□□□□ -0.37
CDK5RAP3-202ENST00000536708 XRCC1P18887 633 aaPredicted RBP12.76□□□□□ -0.37
CDK5RAP3-202ENST00000536708 IMPDH1P20839 514 aa12.76□□□□□ -0.37
CDK5RAP3-202ENST00000536708 ITGB7P26010 798 aa12.76□□□□□ -0.37
CDK5RAP3-202ENST00000536708 NTSR1P30989 418 aa12.76□□□□□ -0.37
CDK5RAP3-202ENST00000536708 MMP12P39900 470 aa12.76□□□□□ -0.37
CDK5RAP3-202ENST00000536708 DPP6P42658 865 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms