RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 LZTS1Q9Y250 596 aa13.18□□□□□ -0.3
VPS33B-202ENST00000535906 HS3ST2Q9Y278 367 aa13.18□□□□□ -0.3
VPS33B-202ENST00000535906 COMMD3-BMI1R4GMX3 469 aa13.18□□□□□ -0.3
VPS33B-202ENST00000535906 FFAR2O15552 330 aa13.18□□□□□ -0.3
VPS33B-202ENST00000535906 GUCA1CO95843 209 aa13.18□□□□□ -0.3
VPS33B-202ENST00000535906 CLPTM1O96005 669 aa13.18□□□□□ -0.3
VPS33B-202ENST00000535906 SPAM1P38567 509 aa13.18□□□□□ -0.3
VPS33B-202ENST00000535906 RPL5P46777 297 aaKnown RBP13.18□□□□□ -0.3
VPS33B-202ENST00000535906 MYBPC1Q00872 1141 aa13.18□□□□□ -0.3
VPS33B-202ENST00000535906 PCBP2Q15366 365 aaKnown RBP eCLIP13.18□□□□□ -0.3
VPS33B-202ENST00000535906 IRAK1BP1Q5VVH5 260 aa13.18□□□□□ -0.3
VPS33B-202ENST00000535906 LRRC66Q68CR7 880 aa13.18□□□□□ -0.3
VPS33B-202ENST00000535906 C22orf39Q6P5X5 142 aa13.18□□□□□ -0.3
VPS33B-202ENST00000535906 BLOC1S3Q6QNY0 202 aa13.18□□□□□ -0.3
VPS33B-202ENST00000535906 LRTOMTQ8WZ04 291 aa13.18□□□□□ -0.3
VPS33B-202ENST00000535906 CLP1Q92989 425 aaKnown RBP13.18□□□□□ -0.3
VPS33B-202ENST00000535906 PBXIP1Q96AQ6 731 aa13.18□□□□□ -0.3
VPS33B-202ENST00000535906 SCRN2Q96FV2 425 aa13.18□□□□□ -0.3
VPS33B-202ENST00000535906 LYSMD1Q96S90 227 aa13.18□□□□□ -0.3
VPS33B-202ENST00000535906 UHRF1Q96T88 793 aaPredicted RBP13.18□□□□□ -0.3
VPS33B-202ENST00000535906 SLC2A11Q9BYW1 496 aa13.18□□□□□ -0.3
VPS33B-202ENST00000535906 NSUN3Q9H649 340 aaKnown RBP13.18□□□□□ -0.3
VPS33B-202ENST00000535906 SLCO3A1Q9UIG8 710 aa13.18□□□□□ -0.3
VPS33B-202ENST00000535906 NDUFAF1Q9Y375 327 aa13.18□□□□□ -0.3
VPS33B-202ENST00000535906 ST14Q9Y5Y6 855 aa13.18□□□□□ -0.3
VPS33B-202ENST00000535906 HELZP42694 1942 aaKnown RBP13.17□□□□□ -0.3
VPS33B-202ENST00000535906 MYO7AQ13402 2215 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 CDH23Q9H251 3354 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 OR7A17O14581 309 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 RFPL2O75678 378 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 TFAP2AP05549 437 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 HSPA8P11142 646 aaKnown RBP13.17□□□□□ -0.3
VPS33B-202ENST00000535906 CALRP27797 417 aaKnown RBP13.17□□□□□ -0.3
VPS33B-202ENST00000535906 ZFP36L2P47974 494 aaKnown RBP13.17□□□□□ -0.3
VPS33B-202ENST00000535906 GJA8P48165 433 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 HTRA4P83105 476 aaPredicted RBP13.17□□□□□ -0.3
VPS33B-202ENST00000535906 CREB5Q02930 508 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 PTSQ03393 145 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 GPRC6AQ5T6X5 926 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 GRAMD4Q6IC98 578 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 CYP2R1Q6VVX0 501 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 Q6ZSR9 355 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 RFLNAQ6ZTI6 216 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 GOLGA7Q7Z5G4 137 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 SPATA19Q7Z5L4 167 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 ADGRG2Q8IZP9 1017 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 NXPE1Q8N323 547 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 CBARPQ8N350 705 aaPredicted RBP13.17□□□□□ -0.3
VPS33B-202ENST00000535906 ECHDC3Q96DC8 303 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 C1orf50Q9BV19 199 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 MRPS26Q9BYN8 205 aaKnown RBP13.17□□□□□ -0.3
VPS33B-202ENST00000535906 ABCG8Q9H221 673 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 SEMA6AQ9H2E6 1030 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 SUV39H2Q9H5I1 410 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 AIG1Q9NVV5 245 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 AGAP14A8MT82 685 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 NEDD8-MDP1E9PL57 170 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 FXYD1O00168 92 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 ANGPT2O15123 496 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 GLUD1P00367 558 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 FAM58BPP0C7Q3 252 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 LHCGRP22888 699 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 ARL1P40616 181 aaPredicted RBP13.17□□□□□ -0.3
VPS33B-202ENST00000535906 GK3PQ14409 553 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 PHKG1Q16816 387 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 GPR33Q49SQ1 333 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 LRRC73Q5JTD7 316 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 DPY19L3Q6ZPD9 716 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 TPRG1Q6ZUI0 275 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 EFL1Q7Z2Z2 1120 aaKnown RBP13.17□□□□□ -0.3
VPS33B-202ENST00000535906 DHFR2Q86XF0 187 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 MYO1HQ8N1T3 1032 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 PDPRQ8NCN5 879 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 MYLIPQ8WY64 445 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 ISG20Q96AZ6 181 aaKnown RBP13.17□□□□□ -0.3
VPS33B-202ENST00000535906 ZNF597Q96LX8 424 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 HBEGFQ99075 208 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 HOPXQ9BPY8 73 aaPredicted RBP13.17□□□□□ -0.3
VPS33B-202ENST00000535906 EFHD1Q9BUP0 239 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 HTATIP2Q9BUP3 242 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 ZDHHC6Q9H6R6 413 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 COQ10BQ9H8M1 238 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 VCX3AQ9NNX9 186 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 ELOVL2Q9NXB9 296 aa13.17□□□□□ -0.3
VPS33B-202ENST00000535906 PTBP2Q9UKA9 531 aaKnown RBP13.17□□□□□ -0.3
VPS33B-202ENST00000535906 TNPO3Q9Y5L0 923 aaKnown RBP13.17□□□□□ -0.3
VPS33B-202ENST00000535906 NME4O00746 187 aa13.16□□□□□ -0.3
VPS33B-202ENST00000535906 RAD51BO15315 384 aa13.16□□□□□ -0.3
VPS33B-202ENST00000535906 TAPBPO15533 448 aa13.16□□□□□ -0.3
VPS33B-202ENST00000535906 MOSPD3O75425 235 aa13.16□□□□□ -0.3
VPS33B-202ENST00000535906 STAMBPO95630 424 aa13.16□□□□□ -0.3
VPS33B-202ENST00000535906 CAPN1P07384 714 aa13.16□□□□□ -0.3
VPS33B-202ENST00000535906 DGKAP23743 735 aa13.16□□□□□ -0.3
VPS33B-202ENST00000535906 HSPA7P48741 367 aa13.16□□□□□ -0.3
VPS33B-202ENST00000535906 RGS4P49798 205 aa13.16□□□□□ -0.3
VPS33B-202ENST00000535906 HTR6P50406 440 aa13.16□□□□□ -0.3
VPS33B-202ENST00000535906 UFM1P61960 85 aa13.16□□□□□ -0.3
VPS33B-202ENST00000535906 GTF2H2Q13888 395 aa13.16□□□□□ -0.3
VPS33B-202ENST00000535906 CAPRIN1Q14444 709 aaKnown RBP13.16□□□□□ -0.3
VPS33B-202ENST00000535906 TEAD2Q15562 447 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms