RNA–Protein interactions for RNA: ENST00000535181.5

CHFR-209, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-209ENST00000535181 LPGAT1Q92604 370 aa20.17■□□□□ 0.82
CHFR-209ENST00000535181 PRDM8Q9NQV8 689 aa20.17■□□□□ 0.82
CHFR-209ENST00000535181 ACSL5Q9ULC5 683 aa20.17■□□□□ 0.82
CHFR-209ENST00000535181 E2F1Q01094 437 aa20.16■□□□□ 0.82
CHFR-209ENST00000535181 RPA4Q13156 261 aa20.16■□□□□ 0.82
CHFR-209ENST00000535181 FASTKD3Q14CZ7 662 aaKnown RBP20.16■□□□□ 0.82
CHFR-209ENST00000535181 DNTTIP2Q5QJE6 756 aaKnown RBP20.16■□□□□ 0.82
CHFR-209ENST00000535181 ZNF470Q6ECI4 717 aa20.16■□□□□ 0.82
CHFR-209ENST00000535181 FAM83HQ6ZRV2 1179 aaPredicted RBP20.16■□□□□ 0.82
CHFR-209ENST00000535181 CNTN4Q8IWV2 1026 aa20.16■□□□□ 0.82
CHFR-209ENST00000535181 ZBED8Q8IZ13 594 aa20.16■□□□□ 0.82
CHFR-209ENST00000535181 SLC37A2Q8TED4 501 aa20.16■□□□□ 0.82
CHFR-209ENST00000535181 PATE1Q8WXA2 126 aa20.16■□□□□ 0.82
CHFR-209ENST00000535181 CERS2Q96G23 380 aa20.16■□□□□ 0.82
CHFR-209ENST00000535181 TSSK1BQ9BXA7 367 aa20.16■□□□□ 0.82
CHFR-209ENST00000535181 EPB41L5Q9HCM4 733 aa20.16■□□□□ 0.82
CHFR-209ENST00000535181 SARS2Q9NP81 518 aaKnown RBP20.16■□□□□ 0.82
CHFR-209ENST00000535181 IL1RAPL1Q9NZN1 696 aa20.16■□□□□ 0.82
CHFR-209ENST00000535181 GNPTGQ9UJJ9 305 aa20.16■□□□□ 0.82
CHFR-209ENST00000535181 PCDHB1Q9Y5F3 818 aa20.16■□□□□ 0.82
CHFR-209ENST00000535181 CPED1A4D0V7 1026 aa20.15■□□□□ 0.82
CHFR-209ENST00000535181 PDZK1P1A8MUH7 402 aa20.15■□□□□ 0.82
CHFR-209ENST00000535181 SNX2O60749 519 aa20.15■□□□□ 0.82
CHFR-209ENST00000535181 BRAFP15056 766 aa20.15■□□□□ 0.82
CHFR-209ENST00000535181 XRCC1P18887 633 aaPredicted RBP20.15■□□□□ 0.82
CHFR-209ENST00000535181 PBLDP30039 288 aaPredicted RBP20.15■□□□□ 0.82
CHFR-209ENST00000535181 MAZP56270 477 aaKnown RBP20.15■□□□□ 0.82
CHFR-209ENST00000535181 HP1BP3Q5SSJ5 553 aaPredicted RBP20.15■□□□□ 0.82
CHFR-209ENST00000535181 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.15■□□□□ 0.82
CHFR-209ENST00000535181 N4BP2L1Q5TBK1 243 aaPredicted RBP20.15■□□□□ 0.82
CHFR-209ENST00000535181 SLC9B2Q86UD5 537 aa20.15■□□□□ 0.82
CHFR-209ENST00000535181 ANKMY2Q8IV38 441 aa20.15■□□□□ 0.82
CHFR-209ENST00000535181 CFAP36Q96G28 342 aa20.15■□□□□ 0.82
CHFR-209ENST00000535181 STN1Q9H668 368 aaKnown RBP20.15■□□□□ 0.82
CHFR-209ENST00000535181 COG4Q9H9E3 785 aa20.15■□□□□ 0.82
CHFR-209ENST00000535181 SAYSD1Q9NPB0 183 aa20.15■□□□□ 0.82
CHFR-209ENST00000535181 RNF215Q9Y6U7 377 aa20.15■□□□□ 0.82
CHFR-209ENST00000535181 H3BMM5 538 aa20.14■□□□□ 0.81
CHFR-209ENST00000535181 LIN7AO14910 233 aaPredicted RBP20.14■□□□□ 0.81
CHFR-209ENST00000535181 S1PR4O95977 384 aa20.14■□□□□ 0.81
CHFR-209ENST00000535181 ESR1P03372 595 aa20.14■□□□□ 0.81
CHFR-209ENST00000535181 KCNA4P22459 653 aa20.14■□□□□ 0.81
CHFR-209ENST00000535181 HALP42357 657 aa20.14■□□□□ 0.81
CHFR-209ENST00000535181 SLC1A2P43004 574 aa20.14■□□□□ 0.81
CHFR-209ENST00000535181 GPR3P46089 330 aa20.14■□□□□ 0.81
CHFR-209ENST00000535181 UBE2IP63279 158 aaKnown RBP20.14■□□□□ 0.81
CHFR-209ENST00000535181 PLOD1Q02809 727 aaPredicted RBP20.14■□□□□ 0.81
CHFR-209ENST00000535181 HSP90AA5PQ58FG0 334 aa20.14■□□□□ 0.81
CHFR-209ENST00000535181 PERM1Q5SV97 790 aa20.14■□□□□ 0.81
CHFR-209ENST00000535181 ZNF449Q6P9G9 518 aa20.14■□□□□ 0.81
CHFR-209ENST00000535181 KIAA0408Q6ZU52 694 aa20.14■□□□□ 0.81
CHFR-209ENST00000535181 CEP128Q6ZU80 1094 aa20.14■□□□□ 0.81
CHFR-209ENST00000535181 RAB44Q7Z6P3 723 aaPredicted RBP20.14■□□□□ 0.81
CHFR-209ENST00000535181 GALNT7Q86SF2 657 aa20.14■□□□□ 0.81
CHFR-209ENST00000535181 CFAP206Q8IYR0 622 aa20.14■□□□□ 0.81
CHFR-209ENST00000535181 WDR48Q8TAF3 677 aa20.14■□□□□ 0.81
CHFR-209ENST00000535181 GSDMBQ8TAX9 411 aa20.14■□□□□ 0.81
CHFR-209ENST00000535181 PYROXD1Q8WU10 500 aa20.14■□□□□ 0.81
CHFR-209ENST00000535181 CCDC74AQ96AQ1 378 aa20.14■□□□□ 0.81
CHFR-209ENST00000535181 BIRC8Q96P09 236 aa20.14■□□□□ 0.81
CHFR-209ENST00000535181 PANX3Q96QZ0 392 aa20.14■□□□□ 0.81
CHFR-209ENST00000535181 SCHIP1Q9P0W5 487 aaPredicted RBP20.14■□□□□ 0.81
CHFR-209ENST00000535181 LRIT1Q9P2V4 623 aa20.14■□□□□ 0.81
CHFR-209ENST00000535181 FBXO5Q9UKT4 447 aa20.14■□□□□ 0.81
CHFR-209ENST00000535181 SPEGQ15772 3267 aa20.14■□□□□ 0.81
CHFR-209ENST00000535181 ASXL3Q9C0F0 2248 aa20.13■□□□□ 0.81
CHFR-209ENST00000535181 UBA6A0AVT1 1052 aaPredicted RBP20.13■□□□□ 0.81
CHFR-209ENST00000535181 GSTA2P09210 222 aa20.13■□□□□ 0.81
CHFR-209ENST00000535181 RPL10P27635 214 aaKnown RBP20.13■□□□□ 0.81
CHFR-209ENST00000535181 DEKP35659 375 aaKnown RBP20.13■□□□□ 0.81
CHFR-209ENST00000535181 CUL1Q13616 776 aa20.13■□□□□ 0.81
CHFR-209ENST00000535181 SEPT7Q16181 437 aaKnown RBP20.13■□□□□ 0.81
CHFR-209ENST00000535181 CYS1Q717R9 158 aa20.13■□□□□ 0.81
CHFR-209ENST00000535181 DENND6AQ8IWF6 608 aa20.13■□□□□ 0.81
CHFR-209ENST00000535181 RBM12BQ8IXT5 1001 aaKnown RBP20.13■□□□□ 0.81
CHFR-209ENST00000535181 UNC5BQ8IZJ1 945 aa20.13■□□□□ 0.81
CHFR-209ENST00000535181 C2CD4AQ8NCU7 369 aaPredicted RBP20.13■□□□□ 0.81
CHFR-209ENST00000535181 SH3KBP1Q96B97 665 aa20.13■□□□□ 0.81
CHFR-209ENST00000535181 CCDC3Q9BQI4 270 aa20.13■□□□□ 0.81
CHFR-209ENST00000535181 TSPYL1Q9H0U9 437 aa20.13■□□□□ 0.81
CHFR-209ENST00000535181 UCK1Q9HA47 277 aa20.13■□□□□ 0.81
CHFR-209ENST00000535181 IARS2Q9NSE4 1012 aaKnown RBP20.13■□□□□ 0.81
CHFR-209ENST00000535181 POT1Q9NUX5 634 aa20.13■□□□□ 0.81
CHFR-209ENST00000535181 MOCS1Q9NZB8 636 aa20.13■□□□□ 0.81
CHFR-209ENST00000535181 ZNF624Q9P2J8 865 aaPredicted RBP20.13■□□□□ 0.81
CHFR-209ENST00000535181 CPNE7Q9UBL6 633 aa20.13■□□□□ 0.81
CHFR-209ENST00000535181 MTRF1LQ9UGC7 380 aaKnown RBP20.13■□□□□ 0.81
CHFR-209ENST00000535181 WDR37Q9Y2I8 494 aa20.13■□□□□ 0.81
CHFR-209ENST00000535181 RHPN2P1A8MT19 583 aa20.12■□□□□ 0.81
CHFR-209ENST00000535181 PPM1DO15297 605 aa20.12■□□□□ 0.81
CHFR-209ENST00000535181 ZW10O43264 779 aa20.12■□□□□ 0.81
CHFR-209ENST00000535181 ADRB1P08588 477 aa20.12■□□□□ 0.81
CHFR-209ENST00000535181 SLC35G4P0C7Q5 338 aa20.12■□□□□ 0.81
CHFR-209ENST00000535181 ERVK-10P10266 1014 aa20.12■□□□□ 0.81
CHFR-209ENST00000535181 LEPRP48357 1165 aaKnown RBP20.12■□□□□ 0.81
CHFR-209ENST00000535181 CD151P48509 253 aa20.12■□□□□ 0.81
CHFR-209ENST00000535181 EIF3BP55884 814 aaKnown RBP20.12■□□□□ 0.81
CHFR-209ENST00000535181 HHEXQ03014 270 aa20.12■□□□□ 0.81
CHFR-209ENST00000535181 CTBP1Q13363 440 aa20.12■□□□□ 0.81
CHFR-209ENST00000535181 CLCA4Q14CN2 919 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms