RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 DOCK7Q96N67 2140 aa3.45□□□□□ -1.86
USP48-215ENST00000534705 ZNF570Q96NI8 536 aa3.45□□□□□ -1.86
USP48-215ENST00000534705 IL17FQ96PD4 163 aa3.45□□□□□ -1.86
USP48-215ENST00000534705 FAM110AQ9BQ89 295 aa3.45□□□□□ -1.86
USP48-215ENST00000534705 HAUS8Q9BT25 410 aa3.45□□□□□ -1.86
USP48-215ENST00000534705 AGXT2Q9BYV1 514 aa3.45□□□□□ -1.86
USP48-215ENST00000534705 UBTD1Q9HAC8 227 aa3.45□□□□□ -1.86
USP48-215ENST00000534705 PCDH9Q9HC56 1237 aa3.45□□□□□ -1.86
USP48-215ENST00000534705 PLSCR4Q9NRQ2 329 aa3.45□□□□□ -1.86
USP48-215ENST00000534705 BLOC1S4Q9NUP1 217 aa3.45□□□□□ -1.86
USP48-215ENST00000534705 CTNNAL1Q9UBT7 734 aa3.45□□□□□ -1.86
USP48-215ENST00000534705 HACL1Q9UJ83 578 aa3.45□□□□□ -1.86
USP48-215ENST00000534705 ICAM5Q9UMF0 924 aa3.45□□□□□ -1.86
USP48-215ENST00000534705 LOC285556D6RIA3 1793 aa3.45□□□□□ -1.86
USP48-215ENST00000534705 KIF16BQ96L93 1317 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 KDM3AQ9Y4C1 1321 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 PLXNB2O15031 1838 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 LAMA4Q16363 1823 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 FRMPD3Q5JV73 1810 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 SSC5DA1L4H1 1573 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 SAA2-SAA4A0A096LPE2 208 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 hDV102S1A0JD36 115 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 TMEM202A6NGA9 273 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 ABCD3P28288 659 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 METAP2P50579 478 aaKnown RBP eCLIP3.44□□□□□ -1.86
USP48-215ENST00000534705 TROAPQ12815 778 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 ZNF155Q12901 538 aaPredicted RBP3.44□□□□□ -1.86
USP48-215ENST00000534705 PPP2R5BQ15173 497 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 SLC9B1Q4ZJI4 515 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 C6orf141Q5SZD1 244 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 SLC9C2Q5TAH2 1124 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 METTL2BQ6P1Q9 378 aaKnown RBP3.44□□□□□ -1.86
USP48-215ENST00000534705 CTR9Q6PD62 1173 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 C16orf54Q6UWD8 224 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 LCTLQ6UWM7 567 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 ATF7IPQ6VMQ6 1270 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 USP50Q70EL3 339 aaPredicted RBP3.44□□□□□ -1.86
USP48-215ENST00000534705 ARMC8Q8IUR7 673 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 DSELQ8IZU8 1212 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 CERS5Q8N5B7 392 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 ZBTB2Q8N680 514 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 CREB3L4Q8TEY5 395 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 SNX21Q969T3 373 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 ZBED3Q96IU2 234 aaPredicted RBP3.44□□□□□ -1.86
USP48-215ENST00000534705 METTL2AQ96IZ6 378 aaKnown RBP3.44□□□□□ -1.86
USP48-215ENST00000534705 SLC41A2Q96JW4 573 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 TIGD1Q96MW7 591 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 NR1H4Q96RI1 486 aaPredicted RBP3.44□□□□□ -1.86
USP48-215ENST00000534705 MPHOSPH8Q99549 860 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 PKP4Q99569 1192 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 NCAPGQ9BPX3 1015 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 MXD3Q9BW11 206 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 HEMGNQ9BXL5 484 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 AP1M1Q9BXS5 423 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 API5Q9BZZ5 524 aaKnown RBP3.44□□□□□ -1.86
USP48-215ENST00000534705 SPRY4Q9C004 299 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 ALDH8A1Q9H2A2 487 aaPredicted RBP3.44□□□□□ -1.86
USP48-215ENST00000534705 JMJD4Q9H9V9 463 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 CD209Q9NNX6 404 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 UBN1Q9NPG3 1134 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 NOX4Q9NPH5 578 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 CNGB3Q9NQW8 809 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 NSMCE4AQ9NXX6 385 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 C1RLQ9NZP8 487 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 OGFRQ9NZT2 677 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 KIF3AQ9Y496 699 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 LSM4Q9Y4Z0 139 aaKnown RBP3.44□□□□□ -1.86
USP48-215ENST00000534705 ASTN2O75129 1339 aaPredicted RBP3.44□□□□□ -1.86
USP48-215ENST00000534705 FAM205AQ6ZU69 1335 aa3.44□□□□□ -1.86
USP48-215ENST00000534705 PLXNA1Q9UIW2 1896 aa3.43□□□□□ -1.86
USP48-215ENST00000534705 CNTNAP1P78357 1384 aa3.43□□□□□ -1.86
USP48-215ENST00000534705 IGHV4OR15-8A0A075B7B6 117 aa3.43□□□□□ -1.86
USP48-215ENST00000534705 LRRC53A6NM62 1247 aa3.43□□□□□ -1.86
USP48-215ENST00000534705 AKR1B15C9JRZ8 316 aaPredicted RBP3.43□□□□□ -1.86
USP48-215ENST00000534705 SOCS6O14544 535 aa3.43□□□□□ -1.86
USP48-215ENST00000534705 KDM4BO94953 1096 aa3.43□□□□□ -1.86
USP48-215ENST00000534705 CLDN14O95500 239 aa3.43□□□□□ -1.86
USP48-215ENST00000534705 CD4P01730 458 aa3.43□□□□□ -1.86
USP48-215ENST00000534705 F7P08709 466 aaPredicted RBP3.43□□□□□ -1.86
USP48-215ENST00000534705 MCM3P25205 808 aa3.43□□□□□ -1.86
USP48-215ENST00000534705 RPS12P25398 132 aaKnown RBP3.43□□□□□ -1.86
USP48-215ENST00000534705 EPHA8P29322 1005 aaPredicted RBP3.43□□□□□ -1.86
USP48-215ENST00000534705 RAD52P43351 418 aa3.43□□□□□ -1.86
USP48-215ENST00000534705 FASLGP48023 281 aa3.43□□□□□ -1.86
USP48-215ENST00000534705 DLX5P56178 289 aa3.43□□□□□ -1.86
USP48-215ENST00000534705 GSCP56915 257 aaPredicted RBP3.43□□□□□ -1.86
USP48-215ENST00000534705 KRTAP10-12P60413 245 aa3.43□□□□□ -1.86
USP48-215ENST00000534705 PSMD6Q15008 389 aa3.43□□□□□ -1.86
USP48-215ENST00000534705 TNIP1Q15025 636 aa3.43□□□□□ -1.86
USP48-215ENST00000534705 GSTA3Q16772 222 aa3.43□□□□□ -1.86
USP48-215ENST00000534705 CCDC57Q2TAC2 916 aa3.43□□□□□ -1.86
USP48-215ENST00000534705 KLHL40Q2TBA0 621 aa3.43□□□□□ -1.86
USP48-215ENST00000534705 USP41Q3LFD5 358 aa3.43□□□□□ -1.86
USP48-215ENST00000534705 CCDC92Q53HC0 331 aaPredicted RBP3.43□□□□□ -1.86
USP48-215ENST00000534705 C1QTNF12Q5T7M4 302 aa3.43□□□□□ -1.86
USP48-215ENST00000534705 CST9Q5W186 159 aa3.43□□□□□ -1.86
USP48-215ENST00000534705 KCTD18Q6PI47 426 aaPredicted RBP3.43□□□□□ -1.86
USP48-215ENST00000534705 UNQ6126/PRO20091Q6UXV3 157 aa3.43□□□□□ -1.86
USP48-215ENST00000534705 B3GNT6Q6ZMB0 384 aa3.43□□□□□ -1.86
USP48-215ENST00000534705 TUBA1AQ71U36 451 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms