RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, human

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSC-208	ENST00000533897	TRIM15	Q9C019	465 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	CWH43	Q9H720	699 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	NT5M	Q9NPB1	228 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	VAPA	Q9P0L0	249 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	ANAPC2	Q9UJX6	822 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	BTRC	Q9Y297	605 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	CRYL1	Q9Y2S2	319 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	TDRKH	Q9Y2W6	561 aa	Known RBP	4.36	□□□□□ -1.71
CTSC-208	ENST00000533897		K7EPI3	171 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	ADAMTS4	O75173	837 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	SLC22A3	O75751	556 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	CLPX	O76031	633 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	MT-CO1	P00395	513 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	C1QC	P02747	245 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	RET	P07949	1114 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	RAP2A	P10114	183 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	HSPA8	P11142	646 aa	Known RBP	4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	ZNF182	P17025	639 aa	Predicted RBP	4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	YAP1	P46937	504 aa	Known RBP	4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	MASP1	P48740	699 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	CPT1A	P50416	773 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	BCAP31	P51572	246 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	C21orf58	P58505	322 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	BEX3	Q00994	111 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	CD300C	Q08708	224 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	BNIP3	Q12983	259 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	TUSC3	Q13454	348 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	PWP1	Q13610	501 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	INPP5A	Q14642	412 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	TAF1A	Q15573	450 aa	Predicted RBP	4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	ACBD5	Q5T8D3	534 aa	Predicted RBP	4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	MARC1	Q5VT66	337 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	TTC33	Q6PID6	262 aa	Predicted RBP	4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	ENPP6	Q6UWR7	440 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	XKR5	Q6UX68	686 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	RSPO2	Q6UXX9	243 aa	Predicted RBP	4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	FAM43B	Q6ZT52	329 aa	Predicted RBP	4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	PRSS48	Q7RTY5	328 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	NECAB2	Q7Z6G3	386 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	MON1A	Q86VX9	555 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	PARP8	Q8N3A8	854 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	TTC9B	Q8N6N2	239 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	PIK3C3	Q8NEB9	887 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	DYNC2LI1	Q8TCX1	351 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	APH1B	Q8WW43	257 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	GLT1D1	Q96MS3	346 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	TTLL2	Q9BWV7	592 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	KAT8	Q9H7Z6	458 aa	Known RBP	4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	CATSPERZ	Q9NTU4	200 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	DCAF13	Q9NV06	445 aa	Known RBP	4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	4.36	□□□□□ -1.71	9e-12	■■■■□ 21.3
CTSC-208	ENST00000533897	EVL	Q9UI08	416 aa	Predicted RBP	4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	MAGEL2	Q9UJ55	1249 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	LEF1	Q9UJU2	399 aa	Predicted RBP	4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	SH3GLB1	Q9Y371	365 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	OR51B4	Q9Y5P0	310 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	SCN5A	Q14524	2016 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	COL4A3	Q01955	1670 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	BCAS1	O75363	584 aa	Predicted RBP	4.35	□□□□□ -1.71
CTSC-208	ENST00000533897	TRPA1	O75762	1119 aa		4.35	□□□□□ -1.71
CTSC-208	ENST00000533897	GLUD1	P00367	558 aa		4.35	□□□□□ -1.71
CTSC-208	ENST00000533897	C1S	P09871	688 aa		4.35	□□□□□ -1.71
CTSC-208	ENST00000533897	CYBA	P13498	195 aa		4.35	□□□□□ -1.71
CTSC-208	ENST00000533897	ACPP	P15309	386 aa		4.35	□□□□□ -1.71
CTSC-208	ENST00000533897	HMOX2	P30519	316 aa		4.35	□□□□□ -1.71
CTSC-208	ENST00000533897	MAGEA10	P43363	369 aa	Predicted RBP	4.35	□□□□□ -1.71
CTSC-208	ENST00000533897	YBEY	P58557	167 aa	Predicted RBP	4.35	□□□□□ -1.71
CTSC-208	ENST00000533897	SLC35A2	P78381	396 aa		4.35	□□□□□ -1.71
CTSC-208	ENST00000533897	DOC2B	Q14184	412 aa		4.35	□□□□□ -1.71
CTSC-208	ENST00000533897	PCSK7	Q16549	785 aa		4.35	□□□□□ -1.71
CTSC-208	ENST00000533897	CYP51A1	Q16850	503 aa		4.35	□□□□□ -1.71
CTSC-208	ENST00000533897	RFTN2	Q52LD8	501 aa	Predicted RBP	4.35	□□□□□ -1.71
CTSC-208	ENST00000533897	USP39	Q53GS9	565 aa	Known RBP	4.35	□□□□□ -1.71
CTSC-208	ENST00000533897	CLLU1OS	Q5K130	101 aa		4.35	□□□□□ -1.71
CTSC-208	ENST00000533897	GPR107	Q5VW38	600 aa		4.35	□□□□□ -1.71
CTSC-208	ENST00000533897	METTL2B	Q6P1Q9	378 aa	Known RBP	4.35	□□□□□ -1.71
CTSC-208	ENST00000533897	C19orf48	Q6RUI8	117 aa		4.35	□□□□□ -1.71
CTSC-208	ENST00000533897	R3HCC1L	Q7Z5L2	792 aa	Known RBP	4.35	□□□□□ -1.71
CTSC-208	ENST00000533897	LGI2	Q8N0V4	545 aa		4.35	□□□□□ -1.71
CTSC-208	ENST00000533897	ZNF786	Q8N393	782 aa		4.35	□□□□□ -1.71
CTSC-208	ENST00000533897	TRIML2	Q8N7C3	387 aa		4.35	□□□□□ -1.71
CTSC-208	ENST00000533897	ABHD11	Q8NFV4	315 aa		4.35	□□□□□ -1.71
CTSC-208	ENST00000533897	STAG3L4	Q8TBR4	150 aa		4.35	□□□□□ -1.71
CTSC-208	ENST00000533897	RAB2B	Q8WUD1	216 aa		4.35	□□□□□ -1.71
CTSC-208	ENST00000533897	KCNJ9	Q92806	393 aa		4.35	□□□□□ -1.71
CTSC-208	ENST00000533897	ACOX2	Q99424	681 aa		4.35	□□□□□ -1.71
CTSC-208	ENST00000533897	CPPED1	Q9BRF8	314 aa	Predicted RBP	4.35	□□□□□ -1.71
CTSC-208	ENST00000533897	EFHD1	Q9BUP0	239 aa		4.35	□□□□□ -1.71
CTSC-208	ENST00000533897	TRIT1	Q9H3H1	467 aa	Known RBP	4.35	□□□□□ -1.71
CTSC-208	ENST00000533897	TOR3A	Q9H497	397 aa		4.35	□□□□□ -1.71
CTSC-208	ENST00000533897	GID8	Q9NWU2	228 aa		4.35	□□□□□ -1.71
CTSC-208	ENST00000533897	OSGIN1	Q9UJX0	560 aa		4.35	□□□□□ -1.71
CTSC-208	ENST00000533897	PSME2	Q9UL46	239 aa		4.35	□□□□□ -1.71
CTSC-208	ENST00000533897	TIMM22	Q9Y584	194 aa		4.35	□□□□□ -1.71
CTSC-208	ENST00000533897	CPQ	Q9Y646	472 aa		4.35	□□□□□ -1.71
CTSC-208	ENST00000533897	NPEPPSL1	A6NEC2	478 aa		4.35	□□□□□ -1.71
CTSC-208	ENST00000533897	CA12	O43570	354 aa		4.35	□□□□□ -1.71
CTSC-208	ENST00000533897	OR1I1	O60431	355 aa		4.35	□□□□□ -1.71
CTSC-208	ENST00000533897	SCN2B	O60939	215 aa		4.35	□□□□□ -1.71
CTSC-208	ENST00000533897	MLYCD	O95822	493 aa		4.35	□□□□□ -1.71

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