RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 IFT27Q9BW83 186 aa4□□□□□ -1.77
SOX6-217ENST00000533870 TTYH1Q9H313 450 aaPredicted RBP4□□□□□ -1.77
SOX6-217ENST00000533870 ATP13A3Q9H7F0 1226 aa4□□□□□ -1.77
SOX6-217ENST00000533870 B3GNT2Q9NY97 397 aa4□□□□□ -1.77
SOX6-217ENST00000533870 COX16Q9P0S2 106 aa4□□□□□ -1.77
SOX6-217ENST00000533870 TMEM181Q9P2C4 612 aa4□□□□□ -1.77
SOX6-217ENST00000533870 PFDN2Q9UHV9 154 aa4□□□□□ -1.77
SOX6-217ENST00000533870 BAIAP2Q9UQB8 552 aa4□□□□□ -1.77
SOX6-217ENST00000533870 SNX10Q9Y5X0 201 aa4□□□□□ -1.77
SOX6-217ENST00000533870 VIRMAQ69YN4 1812 aaKnown RBP4□□□□□ -1.77
SOX6-217ENST00000533870 MGAT4DA6NG13 374 aa4□□□□□ -1.77
SOX6-217ENST00000533870 H7C4K7 107 aa4□□□□□ -1.77
SOX6-217ENST00000533870 ZNF682O95780 498 aa4□□□□□ -1.77
SOX6-217ENST00000533870 PGRP06401 933 aa4□□□□□ -1.77
SOX6-217ENST00000533870 ITGAMP11215 1152 aa4□□□□□ -1.77
SOX6-217ENST00000533870 PTPN1P18031 435 aaKnown RBP4□□□□□ -1.77
SOX6-217ENST00000533870 CD53P19397 219 aa4□□□□□ -1.77
SOX6-217ENST00000533870 MATN1P21941 496 aa4□□□□□ -1.77
SOX6-217ENST00000533870 PAICSP22234 425 aaKnown RBP4□□□□□ -1.77
SOX6-217ENST00000533870 DDOSTP39656 456 aa4□□□□□ -1.77
SOX6-217ENST00000533870 CCT3P49368 545 aaKnown RBP4□□□□□ -1.77
SOX6-217ENST00000533870 IST1P53990 364 aa4□□□□□ -1.77
SOX6-217ENST00000533870 RPS14P62263 151 aaKnown RBP4□□□□□ -1.77
SOX6-217ENST00000533870 ADARB1P78563 741 aaKnown RBP4□□□□□ -1.77
SOX6-217ENST00000533870 CYP4F3Q08477 520 aa4□□□□□ -1.77
SOX6-217ENST00000533870 DMPKQ09013 629 aa4□□□□□ -1.77
SOX6-217ENST00000533870 NFE2L1Q14494 772 aa4□□□□□ -1.77
SOX6-217ENST00000533870 MSS51Q4VC12 460 aa4□□□□□ -1.77
SOX6-217ENST00000533870 TJAP1Q5JTD0 557 aa4□□□□□ -1.77
SOX6-217ENST00000533870 LLGL2Q6P1M3 1020 aa4□□□□□ -1.77
SOX6-217ENST00000533870 SNX20Q7Z614 316 aa4□□□□□ -1.77
SOX6-217ENST00000533870 UBQLNLQ8IYU4 475 aa4□□□□□ -1.77
SOX6-217ENST00000533870 CLDN22Q8N7P3 220 aa4□□□□□ -1.77
SOX6-217ENST00000533870 ASB13Q8WXK3 278 aa4□□□□□ -1.77
SOX6-217ENST00000533870 TMBIM1Q969X1 311 aa4□□□□□ -1.77
SOX6-217ENST00000533870 REXO5Q96IC2 774 aaKnown RBP4□□□□□ -1.77
SOX6-217ENST00000533870 SORT1Q99523 831 aa4□□□□□ -1.77
SOX6-217ENST00000533870 ZBED2Q9BTP6 218 aa4□□□□□ -1.77
SOX6-217ENST00000533870 CATSPERZQ9NTU4 200 aa4□□□□□ -1.77
SOX6-217ENST00000533870 DNAJC11Q9NVH1 559 aa4□□□□□ -1.77
SOX6-217ENST00000533870 AASSQ9UDR5 926 aa4□□□□□ -1.77
SOX6-217ENST00000533870 ZNF282Q9UDV7 671 aaPredicted RBP4□□□□□ -1.77
SOX6-217ENST00000533870 ADGRE2Q9UHX3 823 aa4□□□□□ -1.77
SOX6-217ENST00000533870 KCNE2Q9Y6J6 123 aa4□□□□□ -1.77
SOX6-217ENST00000533870 KIF1AQ12756 1690 aa4□□□□□ -1.77
SOX6-217ENST00000533870 AGAP5A6NIR3 686 aa4□□□□□ -1.77
SOX6-217ENST00000533870 MFSD11O43934 449 aa4□□□□□ -1.77
SOX6-217ENST00000533870 SLC19A2O60779 497 aa4□□□□□ -1.77
SOX6-217ENST00000533870 SEC22BO75396 215 aa4□□□□□ -1.77
SOX6-217ENST00000533870 ALX3O95076 343 aa4□□□□□ -1.77
SOX6-217ENST00000533870 PRAMEF1O95521 474 aa4□□□□□ -1.77
SOX6-217ENST00000533870 OXSR1O95747 527 aaPredicted RBP4□□□□□ -1.77
SOX6-217ENST00000533870 RPS17P08708 135 aaKnown RBP4□□□□□ -1.77
SOX6-217ENST00000533870 TCF4P15884 667 aa4□□□□□ -1.77
SOX6-217ENST00000533870 CD36P16671 472 aa4□□□□□ -1.77
SOX6-217ENST00000533870 STC1P52823 247 aa4□□□□□ -1.77
SOX6-217ENST00000533870 PSMD4P55036 377 aaKnown RBP4□□□□□ -1.77
SOX6-217ENST00000533870 OGDHQ02218 1023 aa4□□□□□ -1.77
SOX6-217ENST00000533870 TRIP4Q15650 581 aaPredicted RBP4□□□□□ -1.77
SOX6-217ENST00000533870 C15orf59Q2T9L4 293 aaPredicted RBP4□□□□□ -1.77
SOX6-217ENST00000533870 AP5B1Q2VPB7 878 aa4□□□□□ -1.77
SOX6-217ENST00000533870 TECRLQ5HYJ1 363 aa4□□□□□ -1.77
SOX6-217ENST00000533870 GLB1LQ6UWU2 654 aa4□□□□□ -1.77
SOX6-217ENST00000533870 USP51Q70EK9 711 aa4□□□□□ -1.77
SOX6-217ENST00000533870 GALNT12Q8IXK2 581 aa4□□□□□ -1.77
SOX6-217ENST00000533870 OR8H2Q8N162 312 aa4□□□□□ -1.77
SOX6-217ENST00000533870 MS4A15Q8N5U1 240 aa4□□□□□ -1.77
SOX6-217ENST00000533870 C2CD4AQ8NCU7 369 aaPredicted RBP4□□□□□ -1.77
SOX6-217ENST00000533870 OR5T2Q8NGG2 359 aa4□□□□□ -1.77
SOX6-217ENST00000533870 OR4L1Q8NH43 312 aa4□□□□□ -1.77
SOX6-217ENST00000533870 ZSCAN18Q8TBC5 510 aaPredicted RBP4□□□□□ -1.77
SOX6-217ENST00000533870 SPPL2AQ8TCT8 520 aa4□□□□□ -1.77
SOX6-217ENST00000533870 ADAMTS14Q8WXS8 1223 aa4□□□□□ -1.77
SOX6-217ENST00000533870 CORO1BQ9BR76 489 aa4□□□□□ -1.77
SOX6-217ENST00000533870 BTBD1Q9H0C5 482 aa4□□□□□ -1.77
SOX6-217ENST00000533870 KLHL31Q9H511 634 aa4□□□□□ -1.77
SOX6-217ENST00000533870 LRTM1Q9HBL6 345 aa4□□□□□ -1.77
SOX6-217ENST00000533870 TMEM161AQ9NX61 479 aa4□□□□□ -1.77
SOX6-217ENST00000533870 CD300AQ9UGN4 299 aa4□□□□□ -1.77
SOX6-217ENST00000533870 GINS2Q9Y248 185 aa4□□□□□ -1.77
SOX6-217ENST00000533870 IGKV6D-21A0A0A0MT36 114 aa4□□□□□ -1.77
SOX6-217ENST00000533870 TRIM64A6NGJ6 449 aa4□□□□□ -1.77
SOX6-217ENST00000533870 OR56A5P0C7T3 313 aa4□□□□□ -1.77
SOX6-217ENST00000533870 IL1R2P27930 398 aa4□□□□□ -1.77
SOX6-217ENST00000533870 HMGCS2P54868 508 aa4□□□□□ -1.77
SOX6-217ENST00000533870 MLLT6P55198 1093 aaPredicted RBP4□□□□□ -1.77
SOX6-217ENST00000533870 CTBP2P56545 445 aa4□□□□□ -1.77
SOX6-217ENST00000533870 PPP3R1P63098 170 aa4□□□□□ -1.77
SOX6-217ENST00000533870 BAMBIQ13145 260 aa4□□□□□ -1.77
SOX6-217ENST00000533870 GALNT3Q14435 633 aa4□□□□□ -1.77
SOX6-217ENST00000533870 VMACQ2NL98 169 aa4□□□□□ -1.77
SOX6-217ENST00000533870 IQCCQ4KMZ1 466 aa4□□□□□ -1.77
SOX6-217ENST00000533870 NOL9Q5SY16 702 aaKnown RBP4□□□□□ -1.77
SOX6-217ENST00000533870 NCBP2-AS2Q69YL0 99 aa4□□□□□ -1.77
SOX6-217ENST00000533870 LIN54Q6MZP7 749 aa4□□□□□ -1.77
SOX6-217ENST00000533870 ZCCHC8Q6NZY4 707 aaKnown RBP4□□□□□ -1.77
SOX6-217ENST00000533870 PMF1Q6P1K2 205 aa4□□□□□ -1.77
SOX6-217ENST00000533870 MSANTD2Q6P1R3 559 aa4□□□□□ -1.77
SOX6-217ENST00000533870 ZNF517Q6ZMY9 492 aaPredicted RBP4□□□□□ -1.77
SOX6-217ENST00000533870 RASAL3Q86YV0 1011 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms