RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 DGKGP49619 791 aa17.34■□□□□ 0.37
PHRF1-205ENST00000533464 PNPLA8Q9NP80 782 aa17.34■□□□□ 0.37
PHRF1-205ENST00000533464 C1orf109Q9NX04 203 aa17.34■□□□□ 0.37
PHRF1-205ENST00000533464 SRRDQ9UH36 339 aa17.34■□□□□ 0.37
PHRF1-205ENST00000533464 CICQ96RK0 1608 aaPredicted RBP17.34■□□□□ 0.37
PHRF1-205ENST00000533464 DLX3O60479 287 aa17.34■□□□□ 0.37
PHRF1-205ENST00000533464 COL6A1P12109 1028 aa17.34■□□□□ 0.37
PHRF1-205ENST00000533464 IDSP22304 550 aa17.34■□□□□ 0.37
PHRF1-205ENST00000533464 RPS9P46781 194 aaKnown RBP17.34■□□□□ 0.37
PHRF1-205ENST00000533464 COX10Q12887 443 aa17.34■□□□□ 0.37
PHRF1-205ENST00000533464 NAPRTQ6XQN6 538 aa17.34■□□□□ 0.37
PHRF1-205ENST00000533464 RNF44Q7L0R7 432 aa17.34■□□□□ 0.37
PHRF1-205ENST00000533464 SNX20Q7Z614 316 aa17.34■□□□□ 0.37
PHRF1-205ENST00000533464 TEFMQ96QE5 360 aaKnown RBP17.34■□□□□ 0.37
PHRF1-205ENST00000533464 NOL6Q9H6R4 1146 aaKnown RBP17.34■□□□□ 0.37
PHRF1-205ENST00000533464 C3orf14Q9HBI5 128 aa17.34■□□□□ 0.37
PHRF1-205ENST00000533464 A0A1B0GW55 424 aa17.34■□□□□ 0.37
PHRF1-205ENST00000533464 LIN7AO14910 233 aaPredicted RBP17.34■□□□□ 0.37
PHRF1-205ENST00000533464 DUX4L2P0CJ85 424 aa17.34■□□□□ 0.37
PHRF1-205ENST00000533464 DUX4L3P0CJ86 424 aa17.34■□□□□ 0.37
PHRF1-205ENST00000533464 DUX4L4P0CJ87 422 aa17.34■□□□□ 0.37
PHRF1-205ENST00000533464 DUX4L5P0CJ88 424 aa17.34■□□□□ 0.37
PHRF1-205ENST00000533464 DUX4L6P0CJ89 424 aa17.34■□□□□ 0.37
PHRF1-205ENST00000533464 DUX4L7P0CJ90 424 aa17.34■□□□□ 0.37
PHRF1-205ENST00000533464 ROR2Q01974 943 aaKnown RBP17.34■□□□□ 0.37
PHRF1-205ENST00000533464 CERS4Q9HA82 394 aa17.34■□□□□ 0.37
PHRF1-205ENST00000533464 FNIP2Q9P278 1114 aa17.34■□□□□ 0.37
PHRF1-205ENST00000533464 DUX4Q9UBX2 424 aa17.34■□□□□ 0.37
PHRF1-205ENST00000533464 TRBV23OR9-2A0A075B6M9 112 aa17.34■□□□□ 0.37
PHRF1-205ENST00000533464 ACTR3P61158 418 aa17.34■□□□□ 0.37
PHRF1-205ENST00000533464 TXNDC8Q6A555 127 aa17.34■□□□□ 0.37
PHRF1-205ENST00000533464 POMGNT2Q8NAT1 580 aa17.34■□□□□ 0.37
PHRF1-205ENST00000533464 OR14C36Q8NHC7 312 aa17.34■□□□□ 0.37
PHRF1-205ENST00000533464 SH3RF2Q8TEC5 729 aa17.34■□□□□ 0.37
PHRF1-205ENST00000533464 SPRTNQ9H040 489 aaPredicted RBP17.34■□□□□ 0.37
PHRF1-205ENST00000533464 CCDC177Q9NQR7 707 aaPredicted RBP17.34■□□□□ 0.37
PHRF1-205ENST00000533464 FFAR2O15552 330 aa17.34■□□□□ 0.37
PHRF1-205ENST00000533464 ASNA1O43681 348 aa17.34■□□□□ 0.37
PHRF1-205ENST00000533464 GNRH1P01148 92 aa17.34■□□□□ 0.37
PHRF1-205ENST00000533464 C8GP07360 202 aa17.34■□□□□ 0.37
PHRF1-205ENST00000533464 ALPIP09923 528 aa17.34■□□□□ 0.37
PHRF1-205ENST00000533464 PRPS2P11908 318 aa17.34■□□□□ 0.37
PHRF1-205ENST00000533464 C15orf39Q6ZRI6 1047 aa17.34■□□□□ 0.37
PHRF1-205ENST00000533464 PTCHD4Q6ZW05 846 aa17.34■□□□□ 0.37
PHRF1-205ENST00000533464 VANGL1Q8TAA9 524 aaPredicted RBP17.34■□□□□ 0.37
PHRF1-205ENST00000533464 C8orf48Q96LL4 319 aa17.34■□□□□ 0.37
PHRF1-205ENST00000533464 EQTNQ9NQ60 294 aa17.34■□□□□ 0.37
PHRF1-205ENST00000533464 SEC14L3Q9UDX4 400 aa17.34■□□□□ 0.37
PHRF1-205ENST00000533464 MAP4K5Q9Y4K4 846 aa17.34■□□□□ 0.37
PHRF1-205ENST00000533464 IGFBP5P24593 272 aa17.33■□□□□ 0.37
PHRF1-205ENST00000533464 CCND3P30281 292 aaPredicted RBP17.33■□□□□ 0.37
PHRF1-205ENST00000533464 CTSKP43235 329 aa17.33■□□□□ 0.37
PHRF1-205ENST00000533464 MED22Q15528 200 aa17.33■□□□□ 0.37
PHRF1-205ENST00000533464 CRISPLD1Q9H336 500 aa17.33■□□□□ 0.37
PHRF1-205ENST00000533464 DMTF1Q9Y222 760 aa17.33■□□□□ 0.37
PHRF1-205ENST00000533464 KLF11O14901 512 aa17.33■□□□□ 0.36
PHRF1-205ENST00000533464 PCCBP05166 539 aa17.33■□□□□ 0.36
PHRF1-205ENST00000533464 PERM1Q5SV97 790 aa17.33■□□□□ 0.36
PHRF1-205ENST00000533464 ARL10Q8N8L6 244 aa17.33■□□□□ 0.36
PHRF1-205ENST00000533464 LEMD2Q8NC56 503 aa17.33■□□□□ 0.36
PHRF1-205ENST00000533464 KBTBD8Q8NFY9 601 aa17.33■□□□□ 0.36
PHRF1-205ENST00000533464 ZNF671Q8TAW3 534 aa17.33■□□□□ 0.36
PHRF1-205ENST00000533464 GPR22Q99680 433 aa17.33■□□□□ 0.36
PHRF1-205ENST00000533464 RBM4BQ9BQ04 359 aaKnown RBP17.33■□□□□ 0.36
PHRF1-205ENST00000533464 RBM4Q9BWF3 364 aaKnown RBP17.33■□□□□ 0.36
PHRF1-205ENST00000533464 PCDHAC1Q9H158 963 aa17.33■□□□□ 0.36
PHRF1-205ENST00000533464 ZMYND8Q9ULU4 1186 aaPredicted RBP17.33■□□□□ 0.36
PHRF1-205ENST00000533464 SLC22A2O15244 555 aa17.33■□□□□ 0.36
PHRF1-205ENST00000533464 TOP3BO95985 862 aaKnown RBP17.33■□□□□ 0.36
PHRF1-205ENST00000533464 THRBP10828 461 aa17.33■□□□□ 0.36
PHRF1-205ENST00000533464 EDNRBP24530 442 aa17.33■□□□□ 0.36
PHRF1-205ENST00000533464 EIF2B2P49770 351 aaKnown RBP17.33■□□□□ 0.36
PHRF1-205ENST00000533464 PSMD7P51665 324 aa17.33■□□□□ 0.36
PHRF1-205ENST00000533464 RBM20Q5T481 1227 aaKnown RBP17.33■□□□□ 0.36
PHRF1-205ENST00000533464 THAP5Q7Z6K1 395 aa17.33■□□□□ 0.36
PHRF1-205ENST00000533464 ANKRD49Q8WVL7 239 aa17.33■□□□□ 0.36
PHRF1-205ENST00000533464 SLC13A3Q8WWT9 602 aa17.33■□□□□ 0.36
PHRF1-205ENST00000533464 CDK15Q96Q40 435 aa17.33■□□□□ 0.36
PHRF1-205ENST00000533464 RSPH9Q9H1X1 276 aaPredicted RBP17.33■□□□□ 0.36
PHRF1-205ENST00000533464 TMEM233B4DJY2 109 aa17.33■□□□□ 0.36
PHRF1-205ENST00000533464 DNAJA2O60884 412 aa17.33■□□□□ 0.36
PHRF1-205ENST00000533464 EFNA1P20827 205 aaPredicted RBP17.33■□□□□ 0.36
PHRF1-205ENST00000533464 AQP4P55087 323 aa17.33■□□□□ 0.36
PHRF1-205ENST00000533464 C11orf65Q8NCR3 313 aa17.33■□□□□ 0.36
PHRF1-205ENST00000533464 HTATIP2Q9BUP3 242 aa17.33■□□□□ 0.36
PHRF1-205ENST00000533464 SEMA3GQ9NS98 782 aa17.33■□□□□ 0.36
PHRF1-205ENST00000533464 N6AMT1Q9Y5N5 214 aa17.33■□□□□ 0.36
PHRF1-205ENST00000533464 PSAT1Q9Y617 370 aa17.33■□□□□ 0.36
PHRF1-205ENST00000533464 PRMT2P55345 433 aa17.32■□□□□ 0.36
PHRF1-205ENST00000533464 RGS21Q2M5E4 152 aa17.32■□□□□ 0.36
PHRF1-205ENST00000533464 WDR60Q8WVS4 1066 aa17.32■□□□□ 0.36
PHRF1-205ENST00000533464 EXOSC8Q96B26 276 aaKnown RBP17.32■□□□□ 0.36
PHRF1-205ENST00000533464 BTBD9Q96Q07 612 aa17.32■□□□□ 0.36
PHRF1-205ENST00000533464 SEZ6LQ9BYH1 1024 aa17.32■□□□□ 0.36
PHRF1-205ENST00000533464 K7EPI3 171 aa17.32■□□□□ 0.36
PHRF1-205ENST00000533464 SCELO95171 688 aa17.32■□□□□ 0.36
PHRF1-205ENST00000533464 RPL4P36578 427 aaKnown RBP17.32■□□□□ 0.36
PHRF1-205ENST00000533464 MTPNP58546 118 aa17.32■□□□□ 0.36
PHRF1-205ENST00000533464 RAB14P61106 215 aa17.32■□□□□ 0.36
PHRF1-205ENST00000533464 RPS14P62263 151 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms