RNA–Protein interactions for RNA: ENST00000533451.1

UBASH3B-208, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 2

Gene UBASH3B, Length 1,032 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-208ENST00000533451 JAMLQ86YT9 394 aa11.25□□□□□ -0.61
UBASH3B-208ENST00000533451 CFAP206Q8IYR0 622 aa11.25□□□□□ -0.61
UBASH3B-208ENST00000533451 WDR36Q8NI36 951 aaKnown RBP11.25□□□□□ -0.61
UBASH3B-208ENST00000533451 CPT1BQ92523 772 aa11.25□□□□□ -0.61
UBASH3B-208ENST00000533451 NCSTNQ92542 709 aa11.25□□□□□ -0.61
UBASH3B-208ENST00000533451 C12orf66Q96MD2 445 aa11.25□□□□□ -0.61
UBASH3B-208ENST00000533451 C19orf43Q9BQ61 176 aa11.25□□□□□ -0.61
UBASH3B-208ENST00000533451 NUDT22Q9BRQ3 303 aa11.25□□□□□ -0.61
UBASH3B-208ENST00000533451 CCM2Q9BSQ5 444 aa11.25□□□□□ -0.61
UBASH3B-208ENST00000533451 TBC1D10AQ9BXI6 508 aa11.25□□□□□ -0.61
UBASH3B-208ENST00000533451 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.25□□□□□ -0.61
UBASH3B-208ENST00000533451 NRSN2Q9GZP1 204 aa11.25□□□□□ -0.61
UBASH3B-208ENST00000533451 WWP1Q9H0M0 922 aa11.25□□□□□ -0.61
UBASH3B-208ENST00000533451 XAB2Q9HCS7 855 aaKnown RBP11.25□□□□□ -0.61
UBASH3B-208ENST00000533451 AKAP7Q9P0M2 348 aaPredicted RBP11.25□□□□□ -0.61
UBASH3B-208ENST00000533451 KLHL3Q9UH77 587 aa11.25□□□□□ -0.61
UBASH3B-208ENST00000533451 ZMIZ1Q9ULJ6 1067 aa11.25□□□□□ -0.61
UBASH3B-208ENST00000533451 ENTPD2Q9Y5L3 495 aa11.25□□□□□ -0.61
UBASH3B-208ENST00000533451 CFAP20Q9Y6A4 193 aaKnown RBP11.25□□□□□ -0.61
UBASH3B-208ENST00000533451 SPEGQ15772 3267 aa11.25□□□□□ -0.61
UBASH3B-208ENST00000533451 CACNA1BQ00975 2339 aa11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 COL27A1Q8IZC6 1860 aaPredicted RBP11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 IGHV1OR21-1A0A087WYE8 117 aa11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 A8MU76 341 aa11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 H7C0S8 307 aa11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 VAPBO95292 243 aa11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 HGFP14210 728 aa11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 TYRP1P17643 537 aa11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 AMD1P17707 334 aa11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 ITGB6P18564 788 aa11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 NMBRP28336 390 aa11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 CD1CP29017 333 aa11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 FOXN2P32314 431 aa11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 NSG1P42857 185 aa11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 PRLHRP49683 370 aa11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 PDX1P52945 283 aa11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 CSE1LP55060 971 aaKnown RBP11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 PTK6Q13882 451 aa11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 BOP1Q14137 746 aaKnown RBP11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 BRD3Q15059 726 aa11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 AGAP9Q5VTM2 703 aa11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 LYPLAL1Q5VWZ2 237 aa11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 IZUMO3Q5VZ72 239 aa11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 DUS1LQ6P1R4 473 aaKnown RBP11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 ZNF534Q76KX8 674 aa11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 RAB11FIP2Q7L804 512 aa11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 LDB1Q86U70 411 aaPredicted RBP11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 CREG2Q8IUH2 290 aa11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 PPIL6Q8IXY8 311 aa11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 CACTIN-AS1Q8N1I8 211 aa11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 FBXO39Q8N4B4 442 aa11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 OR2L2Q8NH16 312 aa11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 HM13Q8TCT9 377 aa11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 JPH3Q8WXH2 748 aaPredicted RBP11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 ELMO1Q92556 727 aa11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 CCDC74BQ96LY2 380 aa11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 C16orf45Q96MC5 204 aaPredicted RBP11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 RUNDC3BQ96NL0 473 aa11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 TRIM31Q9BZY9 425 aa11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 SEMA6CQ9H3T2 930 aa11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 POLR1BQ9H9Y6 1135 aa11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 ZNF624Q9P2J8 865 aaPredicted RBP11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 PISDQ9UG56 409 aa11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 WDR37Q9Y2I8 494 aa11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 RAXQ9Y2V3 346 aa11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 DNMT3AQ9Y6K1 912 aaPredicted RBP11.24□□□□□ -0.61
UBASH3B-208ENST00000533451 FRYQ5TBA9 3013 aa11.23□□□□□ -0.61
UBASH3B-208ENST00000533451 URB1O60287 2271 aaKnown RBP11.23□□□□□ -0.61
UBASH3B-208ENST00000533451 TRBV5-4A0A0C4DH59 114 aa11.23□□□□□ -0.61
UBASH3B-208ENST00000533451 PRAMEF33A0A0G2JMD5 474 aa11.23□□□□□ -0.61
UBASH3B-208ENST00000533451 UBA6A0AVT1 1052 aaPredicted RBP11.23□□□□□ -0.61
UBASH3B-208ENST00000533451 PMS2P1A4D2B8 440 aa11.23□□□□□ -0.61
UBASH3B-208ENST00000533451 KLHL33A6NCF5 533 aa11.23□□□□□ -0.61
UBASH3B-208ENST00000533451 AGAP14A8MT82 685 aa11.23□□□□□ -0.61
UBASH3B-208ENST00000533451 GOLGA8KD6RF30 607 aa11.23□□□□□ -0.61
UBASH3B-208ENST00000533451 F8W8V4 182 aa11.23□□□□□ -0.61
UBASH3B-208ENST00000533451 GOLGA8TH3BQL2 631 aa11.23□□□□□ -0.61
UBASH3B-208ENST00000533451 PLD2O14939 933 aa11.23□□□□□ -0.61
UBASH3B-208ENST00000533451 CD3EAPO15446 510 aaKnown RBP11.23□□□□□ -0.61
UBASH3B-208ENST00000533451 OR1I1O60431 355 aa11.23□□□□□ -0.61
UBASH3B-208ENST00000533451 NDUFS3O75489 264 aa11.23□□□□□ -0.61
UBASH3B-208ENST00000533451 AP2A2O94973 939 aa11.23□□□□□ -0.61
UBASH3B-208ENST00000533451 TNFSF15O95150 251 aa11.23□□□□□ -0.61
UBASH3B-208ENST00000533451 FTH1P02794 183 aa11.23□□□□□ -0.61
UBASH3B-208ENST00000533451 OR56A5P0C7T3 313 aa11.23□□□□□ -0.61
UBASH3B-208ENST00000533451 BRAFP15056 766 aa11.23□□□□□ -0.61
UBASH3B-208ENST00000533451 XRCC1P18887 633 aaPredicted RBP11.23□□□□□ -0.61
UBASH3B-208ENST00000533451 PAMP19021 973 aa11.23□□□□□ -0.61
UBASH3B-208ENST00000533451 CSF2RBP32927 897 aa11.23□□□□□ -0.61
UBASH3B-208ENST00000533451 SLC19A1P41440 591 aa11.23□□□□□ -0.61
UBASH3B-208ENST00000533451 PREPP48147 710 aa11.23□□□□□ -0.61
UBASH3B-208ENST00000533451 MAPK10P53779 464 aa11.23□□□□□ -0.61
UBASH3B-208ENST00000533451 ETF1P62495 437 aaKnown RBP11.23□□□□□ -0.61
UBASH3B-208ENST00000533451 UBE2IP63279 158 aaKnown RBP11.23□□□□□ -0.61
UBASH3B-208ENST00000533451 GPLD1P80108 840 aa11.23□□□□□ -0.61
UBASH3B-208ENST00000533451 DMPKQ09013 629 aa11.23□□□□□ -0.61
UBASH3B-208ENST00000533451 GPR18Q14330 331 aa11.23□□□□□ -0.61
UBASH3B-208ENST00000533451 ITIH4Q14624 930 aa11.23□□□□□ -0.61
UBASH3B-208ENST00000533451 CLCA4Q14CN2 919 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms