RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 UNC5BQ8IZJ1 945 aa11.76□□□□□ -0.53
SSBP3-214ENST00000533209 CEP112Q8N8E3 955 aa11.76□□□□□ -0.53
SSBP3-214ENST00000533209 HM13Q8TCT9 377 aa11.76□□□□□ -0.53
SSBP3-214ENST00000533209 TCF12Q99081 682 aa11.76□□□□□ -0.53
SSBP3-214ENST00000533209 CCDC3Q9BQI4 270 aa11.76□□□□□ -0.53
SSBP3-214ENST00000533209 CARD6Q9BX69 1037 aa11.76□□□□□ -0.53
SSBP3-214ENST00000533209 P2RY12Q9H244 342 aa11.76□□□□□ -0.53
SSBP3-214ENST00000533209 SARS2Q9NP81 518 aaKnown RBP11.76□□□□□ -0.53
SSBP3-214ENST00000533209 C20orf96Q9NUD7 363 aaPredicted RBP11.76□□□□□ -0.53
SSBP3-214ENST00000533209 ZNF624Q9P2J8 865 aaPredicted RBP11.76□□□□□ -0.53
SSBP3-214ENST00000533209 DMGDHQ9UI17 866 aaKnown RBP11.76□□□□□ -0.53
SSBP3-214ENST00000533209 ASXL3Q9C0F0 2248 aa11.76□□□□□ -0.53
SSBP3-214ENST00000533209 ESYT3A0FGR9 886 aa11.75□□□□□ -0.53
SSBP3-214ENST00000533209 OR52A4PA6NMU1 304 aa11.75□□□□□ -0.53
SSBP3-214ENST00000533209 RHPN2P1A8MT19 583 aa11.75□□□□□ -0.53
SSBP3-214ENST00000533209 PRMT5O14744 637 aaPredicted RBP11.75□□□□□ -0.53
SSBP3-214ENST00000533209 B4GAT1O43505 415 aa11.75□□□□□ -0.53
SSBP3-214ENST00000533209 GSTM1P09488 218 aa11.75□□□□□ -0.53
SSBP3-214ENST00000533209 OR56A5P0C7T3 313 aa11.75□□□□□ -0.53
SSBP3-214ENST00000533209 PNLIPP16233 465 aa11.75□□□□□ -0.53
SSBP3-214ENST00000533209 XRCC1P18887 633 aaPredicted RBP11.75□□□□□ -0.53
SSBP3-214ENST00000533209 RPS3P23396 243 aaKnown RBP eCLIP11.75□□□□□ -0.53
SSBP3-214ENST00000533209 SLC19A1P41440 591 aa11.75□□□□□ -0.53
SSBP3-214ENST00000533209 UBE2IP63279 158 aaKnown RBP11.75□□□□□ -0.53
SSBP3-214ENST00000533209 CCL7P80098 99 aa11.75□□□□□ -0.53
SSBP3-214ENST00000533209 GSTM4Q03013 218 aa11.75□□□□□ -0.53
SSBP3-214ENST00000533209 HHEXQ03014 270 aa11.75□□□□□ -0.53
SSBP3-214ENST00000533209 CAV1Q03135 178 aa11.75□□□□□ -0.53
SSBP3-214ENST00000533209 THOC5Q13769 683 aaKnown RBP11.75□□□□□ -0.53
SSBP3-214ENST00000533209 NR1D2Q14995 579 aa11.75□□□□□ -0.53
SSBP3-214ENST00000533209 ZNF789Q5FWF6 425 aa11.75□□□□□ -0.53
SSBP3-214ENST00000533209 SPANXN3Q5MJ09 141 aa11.75□□□□□ -0.53
SSBP3-214ENST00000533209 ZNF470Q6ECI4 717 aa11.75□□□□□ -0.53
SSBP3-214ENST00000533209 TMPRSS7Q7RTY8 843 aa11.75□□□□□ -0.53
SSBP3-214ENST00000533209 SPRED1Q7Z699 444 aa11.75□□□□□ -0.53
SSBP3-214ENST00000533209 SLC9B2Q86UD5 537 aa11.75□□□□□ -0.53
SSBP3-214ENST00000533209 KCNMB4Q86W47 210 aa11.75□□□□□ -0.53
SSBP3-214ENST00000533209 ANKMY2Q8IV38 441 aa11.75□□□□□ -0.53
SSBP3-214ENST00000533209 DENND6AQ8IWF6 608 aa11.75□□□□□ -0.53
SSBP3-214ENST00000533209 CFAP206Q8IYR0 622 aa11.75□□□□□ -0.53
SSBP3-214ENST00000533209 Q8N9G6 341 aaPredicted RBP11.75□□□□□ -0.53
SSBP3-214ENST00000533209 FBXO36Q8NEA4 188 aa11.75□□□□□ -0.53
SSBP3-214ENST00000533209 FBXO25Q8TCJ0 367 aa11.75□□□□□ -0.53
SSBP3-214ENST00000533209 LKAAEAR1Q8TD35 194 aa11.75□□□□□ -0.53
SSBP3-214ENST00000533209 LPGAT1Q92604 370 aa11.75□□□□□ -0.53
SSBP3-214ENST00000533209 CFAP36Q96G28 342 aa11.75□□□□□ -0.53
SSBP3-214ENST00000533209 COG4Q9H9E3 785 aa11.75□□□□□ -0.53
SSBP3-214ENST00000533209 VPS37BQ9H9H4 285 aa11.75□□□□□ -0.53
SSBP3-214ENST00000533209 CPNE7Q9UBL6 633 aa11.75□□□□□ -0.53
SSBP3-214ENST00000533209 ZC3H7BQ9UGR2 993 aaKnown RBP11.75□□□□□ -0.53
SSBP3-214ENST00000533209 ACSL5Q9ULC5 683 aa11.75□□□□□ -0.53
SSBP3-214ENST00000533209 PSMD13Q9UNM6 376 aa11.75□□□□□ -0.53
SSBP3-214ENST00000533209 CEP295Q9C0D2 2601 aa11.75□□□□□ -0.53
SSBP3-214ENST00000533209 A0A1W2PQM1 296 aa11.74□□□□□ -0.53
SSBP3-214ENST00000533209 NTN3O00634 580 aaPredicted RBP11.74□□□□□ -0.53
SSBP3-214ENST00000533209 EIF3HO15372 352 aaKnown RBP eCLIP11.74□□□□□ -0.53
SSBP3-214ENST00000533209 S1PR4O95977 384 aa11.74□□□□□ -0.53
SSBP3-214ENST00000533209 FTH1P02794 183 aa11.74□□□□□ -0.53
SSBP3-214ENST00000533209 F7P08709 466 aaPredicted RBP11.74□□□□□ -0.53
SSBP3-214ENST00000533209 ERVK-10P10266 1014 aa11.74□□□□□ -0.53
SSBP3-214ENST00000533209 SPINK2P20155 84 aa11.74□□□□□ -0.53
SSBP3-214ENST00000533209 GPR3P46089 330 aa11.74□□□□□ -0.53
SSBP3-214ENST00000533209 EIF3BP55884 814 aaKnown RBP11.74□□□□□ -0.53
SSBP3-214ENST00000533209 OR1D5P58170 312 aa11.74□□□□□ -0.53
SSBP3-214ENST00000533209 GUCY2DQ02846 1103 aa11.74□□□□□ -0.53
SSBP3-214ENST00000533209 CTBP1Q13363 440 aa11.74□□□□□ -0.53
SSBP3-214ENST00000533209 RPE65Q16518 533 aa11.74□□□□□ -0.53
SSBP3-214ENST00000533209 GLE1Q53GS7 698 aaKnown RBP11.74□□□□□ -0.53
SSBP3-214ENST00000533209 HSP90AA5PQ58FG0 334 aa11.74□□□□□ -0.53
SSBP3-214ENST00000533209 CTSL3PQ5NE16 218 aa11.74□□□□□ -0.53
SSBP3-214ENST00000533209 RNF187Q5TA31 235 aaPredicted RBP11.74□□□□□ -0.53
SSBP3-214ENST00000533209 HES3Q5TGS1 186 aa11.74□□□□□ -0.53
SSBP3-214ENST00000533209 CDCP2Q5VXM1 449 aa11.74□□□□□ -0.53
SSBP3-214ENST00000533209 CAPRIN2Q6IMN6 1127 aaKnown RBP11.74□□□□□ -0.53
SSBP3-214ENST00000533209 TMPRSS12Q86WS5 348 aa11.74□□□□□ -0.53
SSBP3-214ENST00000533209 LRRC6Q86X45 466 aa11.74□□□□□ -0.53
SSBP3-214ENST00000533209 LMNTD2Q8IXW0 634 aa11.74□□□□□ -0.53
SSBP3-214ENST00000533209 ZBED8Q8IZ13 594 aa11.74□□□□□ -0.53
SSBP3-214ENST00000533209 SPDYE1Q8NFV5 336 aaPredicted RBP11.74□□□□□ -0.53
SSBP3-214ENST00000533209 CALML6Q8TD86 181 aa11.74□□□□□ -0.53
SSBP3-214ENST00000533209 RMDN2Q96LZ7 410 aa11.74□□□□□ -0.53
SSBP3-214ENST00000533209 BIRC8Q96P09 236 aa11.74□□□□□ -0.53
SSBP3-214ENST00000533209 INSM2Q96T92 566 aaPredicted RBP11.74□□□□□ -0.53
SSBP3-214ENST00000533209 FAM167BQ9BTA0 163 aa11.74□□□□□ -0.53
SSBP3-214ENST00000533209 WWP1Q9H0M0 922 aa11.74□□□□□ -0.53
SSBP3-214ENST00000533209 ABCG4Q9H172 646 aa11.74□□□□□ -0.53
SSBP3-214ENST00000533209 OR52A5Q9H2C5 316 aa11.74□□□□□ -0.53
SSBP3-214ENST00000533209 L2HGDHQ9H9P8 463 aa11.74□□□□□ -0.53
SSBP3-214ENST00000533209 ZDHHC18Q9NUE0 388 aa11.74□□□□□ -0.53
SSBP3-214ENST00000533209 KLK13Q9UKR3 277 aa11.74□□□□□ -0.53
SSBP3-214ENST00000533209 FBXO5Q9UKT4 447 aa11.74□□□□□ -0.53
SSBP3-214ENST00000533209 PRAMEF33A0A0G2JMD5 474 aa11.73□□□□□ -0.53
SSBP3-214ENST00000533209 UBA6A0AVT1 1052 aaPredicted RBP11.73□□□□□ -0.53
SSBP3-214ENST00000533209 SLC5A10A0PJK1 596 aa11.73□□□□□ -0.53
SSBP3-214ENST00000533209 FAM221BA6H8Z2 402 aa11.73□□□□□ -0.53
SSBP3-214ENST00000533209 IQCF5A8MTL0 148 aa11.73□□□□□ -0.53
SSBP3-214ENST00000533209 ESPNB1AK53 854 aa11.73□□□□□ -0.53
SSBP3-214ENST00000533209 F8W8V4 182 aa11.73□□□□□ -0.53
SSBP3-214ENST00000533209 LIN7AO14910 233 aaPredicted RBP11.73□□□□□ -0.53
SSBP3-214ENST00000533209 PFDN6O15212 129 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms