RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 MAGEA6P43360 314 aa11.17□□□□□ -0.62
TRAPPC4-213ENST00000533149 PPM1FP49593 454 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC4-213ENST00000533149 LIG3P49916 1009 aa11.17□□□□□ -0.62
TRAPPC4-213ENST00000533149 SEMA5AQ13591 1074 aa11.17□□□□□ -0.62
TRAPPC4-213ENST00000533149 ATXN7L2Q5T6C5 722 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC4-213ENST00000533149 ITPRIPL1Q6GPH6 555 aa11.17□□□□□ -0.62
TRAPPC4-213ENST00000533149 EMBQ6PCB8 327 aa11.17□□□□□ -0.62
TRAPPC4-213ENST00000533149 OR10G6Q8NH81 332 aa11.17□□□□□ -0.62
TRAPPC4-213ENST00000533149 PDCD6IPQ8WUM4 868 aaKnown RBP11.17□□□□□ -0.62
TRAPPC4-213ENST00000533149 CAVIN3Q969G5 261 aa11.17□□□□□ -0.62
TRAPPC4-213ENST00000533149 FMO2Q99518 471 aa11.17□□□□□ -0.62
TRAPPC4-213ENST00000533149 RUBCNLQ9H714 662 aa11.17□□□□□ -0.62
TRAPPC4-213ENST00000533149 PDFQ9HBH1 243 aa11.17□□□□□ -0.62
TRAPPC4-213ENST00000533149 ARFGAP3Q9NP61 516 aa11.17□□□□□ -0.62
TRAPPC4-213ENST00000533149 TMEM9Q9P0T7 183 aa11.17□□□□□ -0.62
TRAPPC4-213ENST00000533149 UBA2Q9UBT2 640 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC4-213ENST00000533149 RSPH14Q9UHP6 348 aa11.17□□□□□ -0.62
TRAPPC4-213ENST00000533149 ENTPD4Q9Y227 616 aa11.17□□□□□ -0.62
TRAPPC4-213ENST00000533149 ATP8A1Q9Y2Q0 1164 aa11.17□□□□□ -0.62
TRAPPC4-213ENST00000533149 PCDHGA9Q9Y5G4 932 aaKnown RBP11.17□□□□□ -0.62
TRAPPC4-213ENST00000533149 CELSR2Q9HCU4 2923 aa11.17□□□□□ -0.62
TRAPPC4-213ENST00000533149 CENPEQ02224 2701 aa11.17□□□□□ -0.62
TRAPPC4-213ENST00000533149 PRSS38A1L453 326 aa11.16□□□□□ -0.62
TRAPPC4-213ENST00000533149 E7EVH7 732 aa11.16□□□□□ -0.62
TRAPPC4-213ENST00000533149 GOLGA8MH3BSY2 632 aa11.16□□□□□ -0.62
TRAPPC4-213ENST00000533149 SMAPO00193 183 aa11.16□□□□□ -0.62
TRAPPC4-213ENST00000533149 IGSF6O95976 241 aa11.16□□□□□ -0.62
TRAPPC4-213ENST00000533149 HLA-DQB2P05538 268 aa11.16□□□□□ -0.62
TRAPPC4-213ENST00000533149 FURINP09958 794 aa11.16□□□□□ -0.62
TRAPPC4-213ENST00000533149 NFKB1P19838 968 aa11.16□□□□□ -0.62
TRAPPC4-213ENST00000533149 F8A1P23610 371 aa11.16□□□□□ -0.62
TRAPPC4-213ENST00000533149 MMP13P45452 471 aa11.16□□□□□ -0.62
TRAPPC4-213ENST00000533149 LMAN1P49257 510 aa11.16□□□□□ -0.62
TRAPPC4-213ENST00000533149 DHX9Q08211 1270 aaKnown RBP11.16□□□□□ -0.62
TRAPPC4-213ENST00000533149 PRPSAP1Q14558 356 aa11.16□□□□□ -0.62
TRAPPC4-213ENST00000533149 KCNJ11Q14654 390 aa11.16□□□□□ -0.62
TRAPPC4-213ENST00000533149 LBRQ14739 615 aaKnown RBP11.16□□□□□ -0.62
TRAPPC4-213ENST00000533149 CYTH1Q15438 398 aa11.16□□□□□ -0.62
TRAPPC4-213ENST00000533149 UGP2Q16851 508 aa11.16□□□□□ -0.62
TRAPPC4-213ENST00000533149 TMCO4Q5TGY1 634 aa11.16□□□□□ -0.62
TRAPPC4-213ENST00000533149 WDR74Q6RFH5 385 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC4-213ENST00000533149 LYSMD3Q7Z3D4 306 aa11.16□□□□□ -0.62
TRAPPC4-213ENST00000533149 ARHGAP22Q7Z5H3 698 aa11.16□□□□□ -0.62
TRAPPC4-213ENST00000533149 HOOK3Q86VS8 718 aa11.16□□□□□ -0.62
TRAPPC4-213ENST00000533149 PLA2G15Q8NCC3 412 aa11.16□□□□□ -0.62
TRAPPC4-213ENST00000533149 FCRL5Q96RD9 977 aa11.16□□□□□ -0.62
TRAPPC4-213ENST00000533149 SLC25A23Q9BV35 468 aa11.16□□□□□ -0.62
TRAPPC4-213ENST00000533149 TWSG1Q9GZX9 223 aa11.16□□□□□ -0.62
TRAPPC4-213ENST00000533149 GBA3Q9H227 469 aa11.16□□□□□ -0.62
TRAPPC4-213ENST00000533149 WDR26Q9H7D7 661 aa11.16□□□□□ -0.62
TRAPPC4-213ENST00000533149 CARS2Q9HA77 564 aaKnown RBP11.16□□□□□ -0.62
TRAPPC4-213ENST00000533149 NT5MQ9NPB1 228 aa11.16□□□□□ -0.62
TRAPPC4-213ENST00000533149 SLAMF7Q9NQ25 335 aa11.16□□□□□ -0.62
TRAPPC4-213ENST00000533149 TRNAU1APQ9NX07 287 aaKnown RBP11.16□□□□□ -0.62
TRAPPC4-213ENST00000533149 MAP10Q9P2G4 905 aa11.16□□□□□ -0.62
TRAPPC4-213ENST00000533149 CROTQ9UKG9 612 aa11.16□□□□□ -0.62
TRAPPC4-213ENST00000533149 SHOC2Q9UQ13 582 aa11.16□□□□□ -0.62
TRAPPC4-213ENST00000533149 SHANK1Q9Y566 2161 aa11.16□□□□□ -0.62
TRAPPC4-213ENST00000533149 ZNF106Q9H2Y7 1883 aaKnown RBP11.16□□□□□ -0.62
TRAPPC4-213ENST00000533149 PIPSLA2A3N6 862 aa11.15□□□□□ -0.62
TRAPPC4-213ENST00000533149 A8MU76 341 aa11.15□□□□□ -0.62
TRAPPC4-213ENST00000533149 PSMD3O43242 534 aa11.15□□□□□ -0.62
TRAPPC4-213ENST00000533149 KATNA1O75449 491 aa11.15□□□□□ -0.62
TRAPPC4-213ENST00000533149 CREG1O75629 220 aa11.15□□□□□ -0.62
TRAPPC4-213ENST00000533149 TMEM63AO94886 807 aa11.15□□□□□ -0.62
TRAPPC4-213ENST00000533149 APRTP07741 180 aa11.15□□□□□ -0.62
TRAPPC4-213ENST00000533149 PRF1P14222 555 aa11.15□□□□□ -0.62
TRAPPC4-213ENST00000533149 TPSB2P20231 275 aa11.15□□□□□ -0.62
TRAPPC4-213ENST00000533149 TRIM23P36406 574 aa11.15□□□□□ -0.62
TRAPPC4-213ENST00000533149 TNNT3P45378 269 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC4-213ENST00000533149 ITKQ08881 620 aa11.15□□□□□ -0.62
TRAPPC4-213ENST00000533149 NIPAL4Q0D2K0 466 aa11.15□□□□□ -0.62
TRAPPC4-213ENST00000533149 RFTN1Q14699 578 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC4-213ENST00000533149 GRM3Q14832 879 aa11.15□□□□□ -0.62
TRAPPC4-213ENST00000533149 TPSAB1Q15661 275 aa11.15□□□□□ -0.62
TRAPPC4-213ENST00000533149 ZRANB3Q5FWF4 1079 aa11.15□□□□□ -0.62
TRAPPC4-213ENST00000533149 SNAP47Q5SQN1 464 aa11.15□□□□□ -0.62
TRAPPC4-213ENST00000533149 C6orf15Q6UXA7 325 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC4-213ENST00000533149 TMEM135Q86UB9 458 aa11.15□□□□□ -0.62
TRAPPC4-213ENST00000533149 CCDC25Q86WR0 208 aa11.15□□□□□ -0.62
TRAPPC4-213ENST00000533149 NRROSQ86YC3 692 aa11.15□□□□□ -0.62
TRAPPC4-213ENST00000533149 NAGSQ8N159 534 aa11.15□□□□□ -0.62
TRAPPC4-213ENST00000533149 PGBD5Q8N414 524 aa11.15□□□□□ -0.62
TRAPPC4-213ENST00000533149 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.15□□□□□ -0.62
TRAPPC4-213ENST00000533149 MCUQ8NE86 351 aa11.15□□□□□ -0.62
TRAPPC4-213ENST00000533149 SLC38A3Q99624 504 aa11.15□□□□□ -0.62
TRAPPC4-213ENST00000533149 GORASP1Q9BQQ3 440 aa11.15□□□□□ -0.62
TRAPPC4-213ENST00000533149 ULBP3Q9BZM4 244 aa11.15□□□□□ -0.62
TRAPPC4-213ENST00000533149 SLC25A51Q9H1U9 297 aa11.15□□□□□ -0.62
TRAPPC4-213ENST00000533149 APMAPQ9HDC9 416 aa11.15□□□□□ -0.62
TRAPPC4-213ENST00000533149 PCDH12Q9NPG4 1184 aa11.15□□□□□ -0.62
TRAPPC4-213ENST00000533149 TTLL3Q9Y4R7 772 aa11.15□□□□□ -0.62
TRAPPC4-213ENST00000533149 POLQO75417 2590 aa11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 ARHGAP10A1A4S6 786 aa11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 TSPAN11A1L157 253 aa11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 TTC24A2A3L6 582 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 A6NCN8 305 aa11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 DPM1O60762 260 aa11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 DNAJB5O75953 348 aa11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 RECQL5O94762 991 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms