RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 CREG1O75629 220 aa16.7■□□□□ 0.26
RPUSD4-207ENST00000532800 CCNYL3P0C7X3 344 aa16.7■□□□□ 0.26
RPUSD4-207ENST00000532800 MTHFD1P11586 935 aaKnown RBP16.7■□□□□ 0.26
RPUSD4-207ENST00000532800 HLA-DPA1P20036 260 aa16.7■□□□□ 0.26
RPUSD4-207ENST00000532800 AKT1P31749 480 aa16.7■□□□□ 0.26
RPUSD4-207ENST00000532800 TNNT3P45378 269 aaPredicted RBP16.7■□□□□ 0.26
RPUSD4-207ENST00000532800 MPP3Q13368 585 aa16.7■□□□□ 0.26
RPUSD4-207ENST00000532800 ITGA9Q13797 1035 aa16.7■□□□□ 0.26
RPUSD4-207ENST00000532800 TFDP3Q5H9I0 405 aa16.7■□□□□ 0.26
RPUSD4-207ENST00000532800 FNBP1LQ5T0N5 605 aa16.7■□□□□ 0.26
RPUSD4-207ENST00000532800 GORASP1Q9BQQ3 440 aa16.7■□□□□ 0.26
RPUSD4-207ENST00000532800 WWP1Q9H0M0 922 aa16.7■□□□□ 0.26
RPUSD4-207ENST00000532800 ACTL8Q9H568 366 aa16.7■□□□□ 0.26
RPUSD4-207ENST00000532800 PDE7BQ9NP56 450 aa16.7■□□□□ 0.26
RPUSD4-207ENST00000532800 SMOXQ9NWM0 555 aa16.7■□□□□ 0.26
RPUSD4-207ENST00000532800 ANKMY1Q9P2S6 941 aa16.7■□□□□ 0.26
RPUSD4-207ENST00000532800 FAM8A1Q9UBU6 413 aa16.7■□□□□ 0.26
RPUSD4-207ENST00000532800 RSPH14Q9UHP6 348 aa16.7■□□□□ 0.26
RPUSD4-207ENST00000532800 TFR2Q9UP52 801 aa16.7■□□□□ 0.26
RPUSD4-207ENST00000532800 PKP3Q9Y446 797 aa16.7■□□□□ 0.26
RPUSD4-207ENST00000532800 ALG6Q9Y672 507 aa16.7■□□□□ 0.26
RPUSD4-207ENST00000532800 ARL5AQ9Y689 179 aa16.7■□□□□ 0.26
RPUSD4-207ENST00000532800 PIPSLA2A3N6 862 aa16.69■□□□□ 0.26
RPUSD4-207ENST00000532800 MKRN2OSH3BPM6 223 aa16.69■□□□□ 0.26
RPUSD4-207ENST00000532800 DNAJB5O75953 348 aa16.69■□□□□ 0.26
RPUSD4-207ENST00000532800 PRAMEF1O95521 474 aa16.69■□□□□ 0.26
RPUSD4-207ENST00000532800 AGTP01019 485 aa16.69■□□□□ 0.26
RPUSD4-207ENST00000532800 MT-ND3P03897 115 aa16.69■□□□□ 0.26
RPUSD4-207ENST00000532800 NTRK1P04629 796 aa16.69■□□□□ 0.26
RPUSD4-207ENST00000532800 PMS2P54278 862 aa16.69■□□□□ 0.26
RPUSD4-207ENST00000532800 RPS18P62269 152 aaKnown RBP16.69■□□□□ 0.26
RPUSD4-207ENST00000532800 KLRB1Q12918 225 aa16.69■□□□□ 0.26
RPUSD4-207ENST00000532800 XRCC4Q13426 336 aa16.69■□□□□ 0.26
RPUSD4-207ENST00000532800 OLIG2Q13516 323 aa16.69■□□□□ 0.26
RPUSD4-207ENST00000532800 UBAP2LQ14157 1087 aaKnown RBP16.69■□□□□ 0.26
RPUSD4-207ENST00000532800 DNTTIP2Q5QJE6 756 aaKnown RBP16.69■□□□□ 0.26
RPUSD4-207ENST00000532800 FAM199XQ6PEV8 388 aaPredicted RBP16.69■□□□□ 0.26
RPUSD4-207ENST00000532800 CCDC50Q8IVM0 306 aa16.69■□□□□ 0.26
RPUSD4-207ENST00000532800 KATNAL2Q8IYT4 538 aa16.69■□□□□ 0.26
RPUSD4-207ENST00000532800 SPDYE1Q8NFV5 336 aaPredicted RBP16.69■□□□□ 0.26
RPUSD4-207ENST00000532800 KRT35Q92764 455 aa16.69■□□□□ 0.26
RPUSD4-207ENST00000532800 ZNF514Q96K75 400 aaPredicted RBP16.69■□□□□ 0.26
RPUSD4-207ENST00000532800 INSM2Q96T92 566 aaPredicted RBP16.69■□□□□ 0.26
RPUSD4-207ENST00000532800 VAT1Q99536 393 aa16.69■□□□□ 0.26
RPUSD4-207ENST00000532800 ANP32EQ9BTT0 268 aa16.69■□□□□ 0.26
RPUSD4-207ENST00000532800 FICDQ9BVA6 458 aa16.69■□□□□ 0.26
RPUSD4-207ENST00000532800 FSD1LQ9BXM9 530 aa16.69■□□□□ 0.26
RPUSD4-207ENST00000532800 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.69■□□□□ 0.26
RPUSD4-207ENST00000532800 TLK1Q9UKI8 766 aa16.69■□□□□ 0.26
RPUSD4-207ENST00000532800 DNMT3AQ9Y6K1 912 aaPredicted RBP16.69■□□□□ 0.26
RPUSD4-207ENST00000532800 OR5K3A6NET4 321 aa16.68■□□□□ 0.26
RPUSD4-207ENST00000532800 TLCD2A6NGC4 264 aa16.68■□□□□ 0.26
RPUSD4-207ENST00000532800 STX7O15400 261 aaKnown RBP16.68■□□□□ 0.26
RPUSD4-207ENST00000532800 RFPL1O75677 317 aa16.68■□□□□ 0.26
RPUSD4-207ENST00000532800 PDGFAP04085 211 aa16.68■□□□□ 0.26
RPUSD4-207ENST00000532800 MSH3P20585 1137 aa16.68■□□□□ 0.26
RPUSD4-207ENST00000532800 RBL1P28749 1068 aa16.68■□□□□ 0.26
RPUSD4-207ENST00000532800 ARCN1P48444 511 aaKnown RBP16.68■□□□□ 0.26
RPUSD4-207ENST00000532800 HADHBP55084 474 aaKnown RBP16.68■□□□□ 0.26
RPUSD4-207ENST00000532800 LONRF2Q1L5Z9 754 aa16.68■□□□□ 0.26
RPUSD4-207ENST00000532800 METRNLQ641Q3 311 aa16.68■□□□□ 0.26
RPUSD4-207ENST00000532800 TCTN3Q6NUS6 607 aa16.68■□□□□ 0.26
RPUSD4-207ENST00000532800 CYB5D1Q6P9G0 228 aa16.68■□□□□ 0.26
RPUSD4-207ENST00000532800 KLHL35Q6PF15 583 aa16.68■□□□□ 0.26
RPUSD4-207ENST00000532800 FBXO38Q6PIJ6 1188 aa16.68■□□□□ 0.26
RPUSD4-207ENST00000532800 LILRA3Q8N6C8 439 aaPredicted RBP16.68■□□□□ 0.26
RPUSD4-207ENST00000532800 ZNF398Q8TD17 642 aa16.68■□□□□ 0.26
RPUSD4-207ENST00000532800 C12orf66Q96MD2 445 aa16.68■□□□□ 0.26
RPUSD4-207ENST00000532800 PPM1MQ96MI6 270 aa16.68■□□□□ 0.26
RPUSD4-207ENST00000532800 HEMGNQ9BXL5 484 aa16.68■□□□□ 0.26
RPUSD4-207ENST00000532800 TRIM55Q9BYV6 548 aa16.68■□□□□ 0.26
RPUSD4-207ENST00000532800 GBA3Q9H227 469 aa16.68■□□□□ 0.26
RPUSD4-207ENST00000532800 FGF21Q9NSA1 209 aa16.68■□□□□ 0.26
RPUSD4-207ENST00000532800 HRASLS2Q9NWW9 162 aa16.68■□□□□ 0.26
RPUSD4-207ENST00000532800 FKBPLQ9UIM3 349 aa16.68■□□□□ 0.26
RPUSD4-207ENST00000532800 MAN2B2Q9Y2E5 1009 aa16.68■□□□□ 0.26
RPUSD4-207ENST00000532800 UBA6A0AVT1 1052 aaPredicted RBP16.67■□□□□ 0.26
RPUSD4-207ENST00000532800 CLEC18AA5D8T8 446 aa16.67■□□□□ 0.26
RPUSD4-207ENST00000532800 MGAT4DA6NG13 374 aa16.67■□□□□ 0.26
RPUSD4-207ENST00000532800 HACD1B0YJ81 288 aa16.67■□□□□ 0.26
RPUSD4-207ENST00000532800 C21orf140B9A014 251 aa16.67■□□□□ 0.26
RPUSD4-207ENST00000532800 SGTAO43765 313 aa16.67■□□□□ 0.26
RPUSD4-207ENST00000532800 ZRANB2O95218 330 aaKnown RBP eCLIP16.67■□□□□ 0.26
RPUSD4-207ENST00000532800 ARL4DP49703 201 aa16.67■□□□□ 0.26
RPUSD4-207ENST00000532800 MLLT10P55197 1068 aa16.67■□□□□ 0.26
RPUSD4-207ENST00000532800 ACY1Q03154 408 aa16.67■□□□□ 0.26
RPUSD4-207ENST00000532800 GPR19Q15760 415 aa16.67■□□□□ 0.26
RPUSD4-207ENST00000532800 CLEC18BQ6UXF7 455 aa16.67■□□□□ 0.26
RPUSD4-207ENST00000532800 ASB18Q6ZVZ8 466 aa16.67■□□□□ 0.26
RPUSD4-207ENST00000532800 DAAM2Q86T65 1068 aa16.67■□□□□ 0.26
RPUSD4-207ENST00000532800 OOSP2Q86WS3 158 aa16.67■□□□□ 0.26
RPUSD4-207ENST00000532800 CNGA4Q8IV77 575 aa16.67■□□□□ 0.26
RPUSD4-207ENST00000532800 TEX19Q8NA77 164 aa16.67■□□□□ 0.26
RPUSD4-207ENST00000532800 CLEC18CQ8NCF0 446 aa16.67■□□□□ 0.26
RPUSD4-207ENST00000532800 RNF214Q8ND24 703 aa16.67■□□□□ 0.26
RPUSD4-207ENST00000532800 OR4K2Q8NGD2 314 aa16.67■□□□□ 0.26
RPUSD4-207ENST00000532800 OR2L2Q8NH16 312 aa16.67■□□□□ 0.26
RPUSD4-207ENST00000532800 MIB2Q96AX9 1013 aa16.67■□□□□ 0.26
RPUSD4-207ENST00000532800 RMDN2Q96LZ7 410 aa16.67■□□□□ 0.26
RPUSD4-207ENST00000532800 CD180Q99467 661 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms