RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 ENPP5Q9UJA9 477 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 TSPAN16Q9UKR8 245 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 KIAA1551Q9HCM1 1747 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 DOCK2Q92608 1830 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 MYBPHLA2RUH7 354 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 SOCS2O14508 198 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 XYLBO75191 536 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 TMEM63AO94886 807 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 NDST3O95803 873 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 SERPINA1P01009 418 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 PRKAR1AP10644 381 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 ZNF37AP17032 561 aaPredicted RBP6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 ELK4P28324 431 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 PCSK1P29120 753 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 GRM5P41594 1212 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 NDUFV1P49821 464 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 LILRA4P59901 499 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 RACK1P63244 317 aaKnown RBP6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 LGALS3BPQ08380 585 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 MAB21L1Q13394 359 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 MBTPS1Q14703 1052 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 SHHQ15465 462 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 INAVAQ3KP66 663 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 HSD17B12Q53GQ0 312 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 PYDC2Q56P42 97 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 C10orf120Q5SQS8 335 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 INTS11Q5TA45 600 aaKnown RBP6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 BTBD8Q5XKL5 378 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 REP15Q6BDI9 236 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 KCNT2Q6UVM3 1135 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 UNC5AQ6ZN44 842 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 KDELC2Q7Z4H8 507 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 SPRED2Q7Z698 418 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 HIPK1Q86Z02 1210 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 SLC9A9Q8IVB4 645 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 TRPV3Q8NET8 790 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 DNAJB14Q8TBM8 379 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 FRMD6Q96NE9 622 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 MUS81Q96NY9 551 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 FEM1AQ9BSK4 669 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 MLPHQ9BV36 600 aaPredicted RBP6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 GATA5Q9BWX5 397 aaPredicted RBP6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 ASB7Q9H672 318 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 SCPEP1Q9HB40 452 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 NTN4Q9HB63 628 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 BRD7Q9NPI1 651 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 ATP13A2Q9NQ11 1180 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 PAK6Q9NQU5 681 aaPredicted RBP6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 PDLIM7Q9NR12 457 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 GPATCH2LQ9NWQ4 482 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 MAU2Q9Y6X3 613 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 ARFGEF1Q9Y6D6 1849 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 HTTP42858 3142 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 CROCCQ5TZA2 2017 aa6.71□□□□□ -1.33
TGFBR3-209ENST00000532540 G3V2T6 193 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 MDM4O15151 490 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 HOXA2O43364 376 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 PDGFAP04085 211 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 USP17L7P0C7H9 530 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 PDGFRAP16234 1089 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 IL7RP16871 459 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 ZNF26P17031 533 aaPredicted RBP6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 GSTM2P28161 218 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 SLC11A1P49279 550 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 SNRPFP62306 86 aaKnown RBP6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 GRSF1Q12849 480 aaKnown RBP eCLIP6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 DAG1Q14118 895 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 PITRM1Q5JRX3 1037 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 C9orf57Q5W0N0 161 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 FAM205BPQ63HN1 556 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 BICRALQ6AI39 1079 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 EPGNQ6UW88 154 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 CCDC117Q8IWD4 279 aaPredicted RBP6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 CENPLQ8N0S6 344 aaPredicted RBP6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 LILRA2Q8N149 483 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 OR13J1Q8NGT2 312 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 OR8K3Q8NH51 312 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 LRRN4Q8WUT4 740 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 KCNN1Q92952 543 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 PPA2Q9H2U2 334 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 ATXN3LQ9H3M9 355 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 APOBEC3GQ9HC16 384 aaKnown RBP6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 PCDHB16Q9NRJ7 776 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 MRPL17Q9NRX2 175 aaKnown RBP6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 INTS10Q9NVR2 710 aaKnown RBP6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 PAK1IP1Q9NWT1 392 aaPredicted RBP6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 TMEM216Q9P0N5 145 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 TMEM5Q9Y2B1 443 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 PCDHA11Q9Y5I1 949 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 COL1A2P08123 1366 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 RIF1Q5UIP0 2472 aaKnown RBP6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 PIPSLA2A3N6 862 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 RGS13O14921 159 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 CCL16O15467 120 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 GNAO1P09471 354 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 TNNI3P19429 210 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 CYP3A5P20815 502 aa6.71□□□□□ -1.34
TGFBR3-209ENST00000532540 RPS3P23396 243 aaKnown RBP eCLIP6.71□□□□□ -1.342e-8■■■□□ 17.5
TGFBR3-209ENST00000532540 AXLP30530 894 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms