RNA–Protein interactions for RNA: ENST00000531872.5

NXF1-212, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 390 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-212ENST00000531872 RPE65Q16518 533 aa7.6□□□□□ -1.19
NXF1-212ENST00000531872 KHDC1Q4VXA5 237 aaKnown RBP7.6□□□□□ -1.19
NXF1-212ENST00000531872 ZNF385CQ66K41 422 aaPredicted RBP7.6□□□□□ -1.19
NXF1-212ENST00000531872 IGFL2Q6UWQ7 119 aa7.6□□□□□ -1.19
NXF1-212ENST00000531872 FJX1Q86VR8 437 aa7.6□□□□□ -1.19
NXF1-212ENST00000531872 GRHL3Q8TE85 626 aa7.6□□□□□ -1.19
NXF1-212ENST00000531872 PPP4R1Q8TF05 950 aa7.6□□□□□ -1.19
NXF1-212ENST00000531872 FAR1Q8WVX9 515 aa7.6□□□□□ -1.19
NXF1-212ENST00000531872 ITLN2Q8WWU7 325 aaPredicted RBP7.6□□□□□ -1.19
NXF1-212ENST00000531872 FATE1Q969F0 183 aa7.6□□□□□ -1.19
NXF1-212ENST00000531872 CLIP3Q96DZ5 547 aa7.6□□□□□ -1.19
NXF1-212ENST00000531872 AGAP3Q96P47 875 aa7.6□□□□□ -1.19
NXF1-212ENST00000531872 SLX1AQ9BQ83 275 aa7.6□□□□□ -1.19
NXF1-212ENST00000531872 WDR77Q9BQA1 342 aaPredicted RBP7.6□□□□□ -1.19
NXF1-212ENST00000531872 DPH2Q9BQC3 489 aaPredicted RBP7.6□□□□□ -1.19
NXF1-212ENST00000531872 DHRS4Q9BTZ2 278 aa7.6□□□□□ -1.19
NXF1-212ENST00000531872 TRIM7Q9C029 511 aa7.6□□□□□ -1.19
NXF1-212ENST00000531872 ACTR5Q9H9F9 607 aaPredicted RBP7.6□□□□□ -1.19
NXF1-212ENST00000531872 SYTL2Q9HCH5 934 aa7.6□□□□□ -1.19
NXF1-212ENST00000531872 SAMSN1Q9NSI8 373 aaKnown RBP7.6□□□□□ -1.19
NXF1-212ENST00000531872 SEPT11Q9NVA2 429 aaKnown RBP7.6□□□□□ -1.19
NXF1-212ENST00000531872 HRASLS2Q9NWW9 162 aa7.6□□□□□ -1.19
NXF1-212ENST00000531872 TAS2R14Q9NYV8 317 aa7.6□□□□□ -1.19
NXF1-212ENST00000531872 TRIM10Q9UDY6 481 aa7.6□□□□□ -1.19
NXF1-212ENST00000531872 ITGB1BP2Q9UKP3 347 aa7.6□□□□□ -1.19
NXF1-212ENST00000531872 TMPRSS11EQ9UL52 423 aa7.6□□□□□ -1.19
NXF1-212ENST00000531872 NOVA2Q9UNW9 492 aaKnown RBP7.6□□□□□ -1.19
NXF1-212ENST00000531872 PADI2Q9Y2J8 665 aa7.6□□□□□ -1.19
NXF1-212ENST00000531872 CSAG2Q9Y5P2 127 aa7.6□□□□□ -1.19
NXF1-212ENST00000531872 FER1L5A0AVI2 2057 aa7.59□□□□□ -1.19
NXF1-212ENST00000531872 A0A1W2PQJ5 194 aa7.59□□□□□ -1.19
NXF1-212ENST00000531872 C9J4A7 227 aa7.59□□□□□ -1.19
NXF1-212ENST00000531872 MATN3O15232 486 aa7.59□□□□□ -1.19
NXF1-212ENST00000531872 ATMINO43313 823 aaPredicted RBP7.59□□□□□ -1.19
NXF1-212ENST00000531872 LCA5LO95447 670 aa7.59□□□□□ -1.19
NXF1-212ENST00000531872 VCLP18206 1134 aa7.59□□□□□ -1.19
NXF1-212ENST00000531872 ZNF165P49910 485 aa7.59□□□□□ -1.19
NXF1-212ENST00000531872 KPNA2P52292 529 aaKnown RBP7.59□□□□□ -1.19
NXF1-212ENST00000531872 ADCY2Q08462 1091 aa7.59□□□□□ -1.19
NXF1-212ENST00000531872 TMEM115Q12893 351 aaPredicted RBP7.59□□□□□ -1.19
NXF1-212ENST00000531872 CAMK4Q16566 473 aa7.59□□□□□ -1.19
NXF1-212ENST00000531872 PTCHD3Q3KNS1 767 aa7.59□□□□□ -1.19
NXF1-212ENST00000531872 BOLA3Q53S33 107 aa7.59□□□□□ -1.19
NXF1-212ENST00000531872 ALS2CLQ60I27 953 aa7.59□□□□□ -1.19
NXF1-212ENST00000531872 PPP1R2P3Q6NXS1 205 aa7.59□□□□□ -1.19
NXF1-212ENST00000531872 MYO7BQ6PIF6 2116 aa7.59□□□□□ -1.19
NXF1-212ENST00000531872 FBXO38Q6PIJ6 1188 aa7.59□□□□□ -1.19
NXF1-212ENST00000531872 BNC2Q6ZN30 1099 aaPredicted RBP7.59□□□□□ -1.19
NXF1-212ENST00000531872 TMC3Q7Z5M5 1100 aa7.59□□□□□ -1.19
NXF1-212ENST00000531872 OOSP2Q86WS3 158 aa7.59□□□□□ -1.19
NXF1-212ENST00000531872 ZNF295-AS1Q8N0V1 137 aa7.59□□□□□ -1.19
NXF1-212ENST00000531872 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.59□□□□□ -1.19
NXF1-212ENST00000531872 OR1L3Q8NH93 324 aa7.59□□□□□ -1.19
NXF1-212ENST00000531872 COG1Q8WTW3 980 aa7.59□□□□□ -1.19
NXF1-212ENST00000531872 ZFPM2Q8WW38 1151 aa7.59□□□□□ -1.19
NXF1-212ENST00000531872 PPM1MQ96MI6 270 aa7.59□□□□□ -1.19
NXF1-212ENST00000531872 VPS35Q96QK1 796 aa7.59□□□□□ -1.19
NXF1-212ENST00000531872 SYT11Q9BT88 431 aa7.59□□□□□ -1.19
NXF1-212ENST00000531872 TLR10Q9BXR5 811 aa7.59□□□□□ -1.19
NXF1-212ENST00000531872 TRIM8Q9BZR9 551 aa7.59□□□□□ -1.19
NXF1-212ENST00000531872 FANCEQ9HB96 536 aa7.59□□□□□ -1.19
NXF1-212ENST00000531872 ZFYVE1Q9HBF4 777 aa7.59□□□□□ -1.19
NXF1-212ENST00000531872 CHST11Q9NPF2 352 aa7.59□□□□□ -1.19
NXF1-212ENST00000531872 RBM22Q9NW64 420 aaKnown RBP eCLIP7.59□□□□□ -1.19
NXF1-212ENST00000531872 SOHLH2Q9NX45 425 aa7.59□□□□□ -1.19
NXF1-212ENST00000531872 P4HTMQ9NXG6 502 aa7.59□□□□□ -1.19
NXF1-212ENST00000531872 TAB2Q9NYJ8 693 aa7.59□□□□□ -1.19
NXF1-212ENST00000531872 CNTRLQ7Z7A1 2325 aa7.58□□□□□ -1.2
NXF1-212ENST00000531872 PCM1Q15154 2024 aa7.58□□□□□ -1.2
NXF1-212ENST00000531872 SLC9B1P1A6NJY1 282 aa7.58□□□□□ -1.2
NXF1-212ENST00000531872 TMEM150CB9EJG8 249 aa7.58□□□□□ -1.2
NXF1-212ENST00000531872 MASP2O00187 686 aa7.58□□□□□ -1.2
NXF1-212ENST00000531872 PEX12O00623 359 aa7.58□□□□□ -1.2
NXF1-212ENST00000531872 DDX3YO15523 660 aaKnown RBP7.58□□□□□ -1.2
NXF1-212ENST00000531872 LDB2O43679 373 aa7.58□□□□□ -1.2
NXF1-212ENST00000531872 HLA-DQB2P05538 268 aa7.58□□□□□ -1.2
NXF1-212ENST00000531872 MMP2P08253 660 aa7.58□□□□□ -1.2
NXF1-212ENST00000531872 RARAP10276 462 aa7.58□□□□□ -1.2
NXF1-212ENST00000531872 MTHFD1P11586 935 aaKnown RBP7.58□□□□□ -1.2
NXF1-212ENST00000531872 TCF4P15884 667 aa7.58□□□□□ -1.2
NXF1-212ENST00000531872 BPIP17213 487 aa7.58□□□□□ -1.2
NXF1-212ENST00000531872 CYP2A7P20853 494 aa7.58□□□□□ -1.2
NXF1-212ENST00000531872 CCNCP24863 283 aa7.58□□□□□ -1.2
NXF1-212ENST00000531872 GALNT2Q10471 571 aa7.58□□□□□ -1.2
NXF1-212ENST00000531872 ZNF630Q2M218 657 aaPredicted RBP7.58□□□□□ -1.2
NXF1-212ENST00000531872 SMTNL2Q2TAL5 461 aa7.58□□□□□ -1.2
NXF1-212ENST00000531872 DPCR1Q3MIW9 517 aa7.58□□□□□ -1.2
NXF1-212ENST00000531872 B3GNTL1Q67FW5 361 aaPredicted RBP7.58□□□□□ -1.2
NXF1-212ENST00000531872 FCRL6Q6DN72 434 aa7.58□□□□□ -1.2
NXF1-212ENST00000531872 TIGD7Q6NT04 549 aaPredicted RBP7.58□□□□□ -1.2
NXF1-212ENST00000531872 FAM83HQ6ZRV2 1179 aaPredicted RBP7.58□□□□□ -1.2
NXF1-212ENST00000531872 AMZ2Q86W34 360 aa7.58□□□□□ -1.2
NXF1-212ENST00000531872 TRAPPC5Q8IUR0 188 aa7.58□□□□□ -1.2
NXF1-212ENST00000531872 TTC30BQ8N4P2 665 aa7.58□□□□□ -1.2
NXF1-212ENST00000531872 TSGA13Q96PP4 275 aa7.58□□□□□ -1.2
NXF1-212ENST00000531872 TRAPPC9Q96Q05 1148 aa7.58□□□□□ -1.2
NXF1-212ENST00000531872 C17orf62Q9BQA9 187 aa7.58□□□□□ -1.2
NXF1-212ENST00000531872 XPO4Q9C0E2 1151 aaKnown RBP7.58□□□□□ -1.2
NXF1-212ENST00000531872 MAGEE1Q9HCI5 957 aa7.58□□□□□ -1.2
NXF1-212ENST00000531872 PCDH18Q9HCL0 1135 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms