RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 RAD21L1Q9H4I0 556 aa4.33□□□□□ -1.72
USP47-211ENST00000531513 IL1RAPL2Q9NP60 686 aa4.33□□□□□ -1.72
USP47-211ENST00000531513 MMP25Q9NPA2 562 aa4.33□□□□□ -1.72
USP47-211ENST00000531513 EQTNQ9NQ60 294 aa4.33□□□□□ -1.72
USP47-211ENST00000531513 SIRT3Q9NTG7 399 aaPredicted RBP4.33□□□□□ -1.72
USP47-211ENST00000531513 STK39Q9UEW8 545 aa4.33□□□□□ -1.72
USP47-211ENST00000531513 SLC24A2Q9UI40 661 aa4.33□□□□□ -1.72
USP47-211ENST00000531513 LEF1Q9UJU2 399 aaPredicted RBP4.33□□□□□ -1.72
USP47-211ENST00000531513 CDH7Q9ULB5 785 aa4.33□□□□□ -1.72
USP47-211ENST00000531513 TMEM272A0A1B0GTI8 110 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 A0A1W2PPC1 479 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 LRRD1A4D1F6 860 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 A6NNC1 897 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 ERVV-2B6SEH9 535 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 DDX39AO00148 427 aaKnown RBP4.32□□□□□ -1.72
USP47-211ENST00000531513 RTCAO00442 366 aaKnown RBP4.32□□□□□ -1.72
USP47-211ENST00000531513 NDUFS4O43181 175 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 PLPP2O43688 288 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 KINO60870 393 aaKnown RBP4.32□□□□□ -1.72
USP47-211ENST00000531513 KERAO60938 352 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 TOMM70O94826 608 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 HOXB2P14652 356 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 CHRNB2P17787 502 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 PSMA3P25788 255 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 PTPN3P26045 913 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 NMBRP28336 390 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 TNFRSF8P28908 595 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 CDC25AP30304 524 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 CDC25CP30307 473 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 EIF2S3P41091 472 aaKnown RBP4.32□□□□□ -1.72
USP47-211ENST00000531513 ALDH7A1P49419 539 aaKnown RBP4.32□□□□□ -1.72
USP47-211ENST00000531513 NAGLUP54802 743 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 CSNK2A1P68400 391 aaPredicted RBP4.32□□□□□ -1.72
USP47-211ENST00000531513 PPATQ06203 517 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 WASHC5Q12768 1159 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 HSPB3Q12988 150 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 EIF2S3LQ2VIR3 472 aaKnown RBP4.32□□□□□ -1.72
USP47-211ENST00000531513 DCST1Q5T197 706 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 LCN10Q6JVE6 187 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 MOXD1Q6UVY6 613 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 GBP6Q6ZN66 633 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 SPATA21Q7Z572 469 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 ABI3BPQ7Z7G0 1075 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 DSG4Q86SJ6 1040 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 HOOK3Q86VS8 718 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 SYCP3Q8IZU3 236 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 SLC4A11Q8NBS3 891 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 ATAD1Q8NBU5 361 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 CSNK2A3Q8NEV1 391 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 EXD1Q8NHP7 514 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 GRAPLQ8TC17 118 aaPredicted RBP4.32□□□□□ -1.72
USP47-211ENST00000531513 TMEM174Q8WUU8 243 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 RMDN2Q96LZ7 410 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 MS4A10Q96PG2 267 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 TASP1Q9H6P5 420 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 MAP6D1Q9H9H5 199 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 MID1IP1Q9NPA3 183 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 ABCB8Q9NUT2 735 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 CACNG4Q9UBN1 327 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 ARMCX3Q9UH62 379 aaPredicted RBP4.32□□□□□ -1.72
USP47-211ENST00000531513 NFS1Q9Y697 457 aa4.32□□□□□ -1.72
USP47-211ENST00000531513 GAGE12JA6NER3 117 aa4.31□□□□□ -1.72
USP47-211ENST00000531513 TRIM77I1YAP6 450 aa4.31□□□□□ -1.72
USP47-211ENST00000531513 WNT9BO14905 357 aa4.31□□□□□ -1.72
USP47-211ENST00000531513 EGFP01133 1207 aa4.31□□□□□ -1.72
USP47-211ENST00000531513 FAM58BPP0C7Q3 252 aa4.31□□□□□ -1.72
USP47-211ENST00000531513 CHRNB1P11230 501 aa4.31□□□□□ -1.72
USP47-211ENST00000531513 ADRA2CP18825 462 aa4.31□□□□□ -1.72
USP47-211ENST00000531513 CRKLP46109 303 aaKnown RBP4.31□□□□□ -1.72
USP47-211ENST00000531513 ZNF75DP51815 510 aa4.31□□□□□ -1.72
USP47-211ENST00000531513 PGGT1BP53609 377 aa4.31□□□□□ -1.72
USP47-211ENST00000531513 MZT1Q08AG7 82 aa4.31□□□□□ -1.72
USP47-211ENST00000531513 MAD2L1Q13257 205 aaPredicted RBP4.31□□□□□ -1.72
USP47-211ENST00000531513 ITGA7Q13683 1181 aa4.31□□□□□ -1.72
USP47-211ENST00000531513 MELKQ14680 651 aa4.31□□□□□ -1.72
USP47-211ENST00000531513 MVPQ14764 893 aaKnown RBP4.31□□□□□ -1.72
USP47-211ENST00000531513 INPP5JQ15735 1006 aaPredicted RBP4.31□□□□□ -1.72
USP47-211ENST00000531513 MEP1AQ16819 746 aa4.31□□□□□ -1.72
USP47-211ENST00000531513 DUSP6Q16828 381 aa4.31□□□□□ -1.72
USP47-211ENST00000531513 SYT16Q17RD7 645 aa4.31□□□□□ -1.72
USP47-211ENST00000531513 KLHL26Q53HC5 615 aa4.31□□□□□ -1.72
USP47-211ENST00000531513 FAM91A1Q658Y4 838 aa4.31□□□□□ -1.72
USP47-211ENST00000531513 ZNF324BQ6AW86 544 aaPredicted RBP4.31□□□□□ -1.72
USP47-211ENST00000531513 B3GNT6Q6ZMB0 384 aa4.31□□□□□ -1.72
USP47-211ENST00000531513 ZBTB49Q6ZSB9 765 aa4.31□□□□□ -1.72
USP47-211ENST00000531513 SLC16A12Q6ZSM3 486 aa4.31□□□□□ -1.72
USP47-211ENST00000531513 C11orf57Q6ZUT1 292 aaPredicted RBP4.31□□□□□ -1.72
USP47-211ENST00000531513 DET1Q7L5Y6 550 aa4.31□□□□□ -1.72
USP47-211ENST00000531513 TMEM173Q86WV6 379 aaPredicted RBP4.31□□□□□ -1.72
USP47-211ENST00000531513 TIGD4Q8IY51 512 aa4.31□□□□□ -1.72
USP47-211ENST00000531513 BEST3Q8N1M1 668 aa4.31□□□□□ -1.72
USP47-211ENST00000531513 NHLRC2Q8NBF2 726 aa4.31□□□□□ -1.72
USP47-211ENST00000531513 ENGASEQ8NFI3 743 aa4.31□□□□□ -1.72
USP47-211ENST00000531513 WDR20Q8TBZ3 569 aa4.31□□□□□ -1.72
USP47-211ENST00000531513 ATL1Q8WXF7 558 aa4.31□□□□□ -1.72
USP47-211ENST00000531513 ROBO4Q8WZ75 1007 aa4.31□□□□□ -1.72
USP47-211ENST00000531513 TRIB2Q92519 343 aa4.31□□□□□ -1.72
USP47-211ENST00000531513 SPSB1Q96BD6 273 aa4.31□□□□□ -1.72
USP47-211ENST00000531513 GRAMD2BQ96HH9 432 aa4.31□□□□□ -1.72
USP47-211ENST00000531513 FAM84BQ96KN1 310 aaPredicted RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms