RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 TCP11X1B4DZS4 312 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 SSX5O60225 188 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 CCDC22O60826 627 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 SULT1C4O75897 302 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 VNN1O95497 513 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 AGR2O95994 175 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 APOC1P02654 83 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 SLC4A1P02730 911 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 ATP5BP06576 529 aaKnown RBP5.59□□□□□ -1.51
CD44-231ENST00000531110 ANXA6P08133 673 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 POLR2MP0CAP2 368 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 POU2F1P14859 743 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 MST1P26927 711 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 CD38P28907 300 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 RAD52P43351 418 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 HOXA1P49639 335 aaPredicted RBP5.59□□□□□ -1.51
CD44-231ENST00000531110 SUCLG1P53597 346 aaKnown RBP5.59□□□□□ -1.51
CD44-231ENST00000531110 ITGA8P53708 1063 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 RHAGQ02094 409 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 SLC34A1Q06495 639 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 NAB1Q13506 487 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 SCARB2Q14108 478 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 SELPLGQ14242 412 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 RCN2Q14257 317 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 TRADDQ15628 312 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 AANATQ16613 207 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 MAPKAPK3Q16644 382 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 PFKFB4Q16877 469 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 LRIT3Q3SXY7 679 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 ERMARDQ5T6L9 678 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 ARL6IP4Q66PJ3 421 aaKnown RBP5.59□□□□□ -1.51
CD44-231ENST00000531110 DUPD1Q68J44 220 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 PM20D1Q6GTS8 502 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 ELP2Q6IA86 826 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 SULT1C3Q6IMI6 304 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 TRIM72Q6ZMU5 477 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 TRAPPC11Q7Z392 1133 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 CPLX4Q7Z7G2 160 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 GLRX5Q86SX6 157 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 VSTM4Q8IW00 320 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 RIBC1Q8N443 379 aaPredicted RBP5.59□□□□□ -1.51
CD44-231ENST00000531110 LINC01465Q8N7H1 131 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 TRPV1Q8NER1 839 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 ABHD5Q8WTS1 349 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 PDCD6IPQ8WUM4 868 aaKnown RBP5.59□□□□□ -1.51
CD44-231ENST00000531110 SLC44A1Q8WWI5 657 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 RAPGEF5Q92565 580 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 SLC25A36Q96CQ1 311 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 DAZAP1Q96EP5 407 aaKnown RBP5.59□□□□□ -1.51
CD44-231ENST00000531110 WDYHV1Q96HA8 205 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 PRICKLE1Q96MT3 831 aaPredicted RBP5.59□□□□□ -1.51
CD44-231ENST00000531110 BTBD9Q96Q07 612 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 SLC29A1Q99808 456 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 TRAF4Q9BUZ4 470 aaPredicted RBP5.59□□□□□ -1.51
CD44-231ENST00000531110 ACAT2Q9BWD1 397 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 PABPC3Q9H361 631 aaKnown RBP5.59□□□□□ -1.51
CD44-231ENST00000531110 THAP9Q9H5L6 903 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 STN1Q9H668 368 aaKnown RBP5.59□□□□□ -1.51
CD44-231ENST00000531110 CERS4Q9HA82 394 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 PTPRHQ9HD43 1115 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 GGA3Q9NZ52 723 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 IGSF9Q9P2J2 1179 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 ANKMY1Q9P2S6 941 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 SERGEFQ9UGK8 458 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 ARHGAP26Q9UNA1 814 aa5.59□□□□□ -1.51
CD44-231ENST00000531110 CHD1O14646 1710 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 MYO5CQ9NQX4 1742 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 A0A1B0GTQ1 180 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 A0A1W2PQ67 120 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 OR6C74A6NCV1 312 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 LRRIQ4A6NIV6 560 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 LRRC3CA6NJW4 275 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 ZNF233A6NK53 670 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 SPRY2O43597 315 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 CIDEAO60543 219 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 CCNT2O60583 730 aaKnown RBP5.58□□□□□ -1.52
CD44-231ENST00000531110 SERPINI2O75830 405 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 DDNO94850 711 aaPredicted RBP5.58□□□□□ -1.52
CD44-231ENST00000531110 CSPG5O95196 566 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 DEXIO95424 95 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 OAS1P00973 400 aaKnown RBP5.58□□□□□ -1.52
CD44-231ENST00000531110 OPN1LWP04000 364 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 HMOX1P09601 288 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 TMEM11P17152 192 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 RAB4AP20338 218 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 DNAJB1P25685 340 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 CDC25CP30307 473 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 TTKP33981 857 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 HCAR3P49019 387 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 PTH2RP49190 550 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 EIF3BP55884 814 aaKnown RBP5.58□□□□□ -1.52
CD44-231ENST00000531110 PEX3P56589 373 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 IRX4P78413 519 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 BNC1Q01954 994 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 DMC1Q14565 340 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 ACOX1Q15067 660 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 GPR162Q16538 588 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 SLC39A12Q504Y0 691 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 BRMS1LQ5PSV4 323 aa5.58□□□□□ -1.52
CD44-231ENST00000531110 C6orf163Q5TEZ5 329 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms