RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 PCDHGA10Q9Y5H3 936 aa18.5■□□□□ 0.55
SSRP1-204ENST00000529002 NUP210LQ5VU65 1888 aa18.5■□□□□ 0.55
SSRP1-204ENST00000529002 ZBTB11O95625 1053 aaPredicted RBP18.49■□□□□ 0.55
SSRP1-204ENST00000529002 BPIP17213 487 aa18.49■□□□□ 0.55
SSRP1-204ENST00000529002 CA4P22748 312 aa18.49■□□□□ 0.55
SSRP1-204ENST00000529002 HALP42357 657 aa18.49■□□□□ 0.55
SSRP1-204ENST00000529002 UBXN1Q04323 297 aa18.49■□□□□ 0.55
SSRP1-204ENST00000529002 BECN1Q14457 450 aa18.49■□□□□ 0.55
SSRP1-204ENST00000529002 ZNF789Q5FWF6 425 aa18.49■□□□□ 0.55
SSRP1-204ENST00000529002 LYPLAL1Q5VWZ2 237 aa18.49■□□□□ 0.55
SSRP1-204ENST00000529002 NCBP2-AS2Q69YL0 99 aa18.49■□□□□ 0.55
SSRP1-204ENST00000529002 TMC3Q7Z5M5 1100 aa18.49■□□□□ 0.55
SSRP1-204ENST00000529002 KCNMB4Q86W47 210 aa18.49■□□□□ 0.55
SSRP1-204ENST00000529002 ST6GALNAC3Q8NDV1 305 aa18.49■□□□□ 0.55
SSRP1-204ENST00000529002 IMP3Q9NV31 184 aaKnown RBP18.49■□□□□ 0.55
SSRP1-204ENST00000529002 PCNX1Q96RV3 2341 aa18.49■□□□□ 0.55
SSRP1-204ENST00000529002 PCM1Q15154 2024 aa18.49■□□□□ 0.55
SSRP1-204ENST00000529002 OR6C74A6NCV1 312 aa18.48■□□□□ 0.55
SSRP1-204ENST00000529002 SLC9B1P1A6NJY1 282 aa18.48■□□□□ 0.55
SSRP1-204ENST00000529002 E2F3O00716 465 aa18.48■□□□□ 0.55
SSRP1-204ENST00000529002 AURKAO14965 403 aa18.48■□□□□ 0.55
SSRP1-204ENST00000529002 VEGFDO43915 354 aa18.48■□□□□ 0.55
SSRP1-204ENST00000529002 TPM2P07951 284 aa18.48■□□□□ 0.55
SSRP1-204ENST00000529002 CTSCP53634 463 aa18.48■□□□□ 0.55
SSRP1-204ENST00000529002 DCDC1P59894 354 aa18.48■□□□□ 0.55
SSRP1-204ENST00000529002 SLC25A11Q02978 314 aaKnown RBP18.48■□□□□ 0.55
SSRP1-204ENST00000529002 TMEM115Q12893 351 aaPredicted RBP18.48■□□□□ 0.55
SSRP1-204ENST00000529002 NFE2L1Q14494 772 aa18.48■□□□□ 0.55
SSRP1-204ENST00000529002 KRT81Q14533 505 aa18.48■□□□□ 0.55
SSRP1-204ENST00000529002 NCF4Q15080 339 aa18.48■□□□□ 0.55
SSRP1-204ENST00000529002 ATP13A5Q4VNC0 1218 aa18.48■□□□□ 0.55
SSRP1-204ENST00000529002 KLHL35Q6PF15 583 aa18.48■□□□□ 0.55
SSRP1-204ENST00000529002 MRGPREQ86SM8 312 aa18.48■□□□□ 0.55
SSRP1-204ENST00000529002 GALNT16Q8N428 558 aa18.48■□□□□ 0.55
SSRP1-204ENST00000529002 ENOX1Q8TC92 643 aaKnown RBP18.48■□□□□ 0.55
SSRP1-204ENST00000529002 CD180Q99467 661 aa18.48■□□□□ 0.55
SSRP1-204ENST00000529002 NRTNQ99748 197 aa18.48■□□□□ 0.55
SSRP1-204ENST00000529002 ACTR5Q9H9F9 607 aaPredicted RBP18.48■□□□□ 0.55
SSRP1-204ENST00000529002 LATS2Q9NRM7 1088 aa18.48■□□□□ 0.55
SSRP1-204ENST00000529002 ITGB1BP2Q9UKP3 347 aa18.48■□□□□ 0.55
SSRP1-204ENST00000529002 BTRCQ9Y297 605 aa18.48■□□□□ 0.55
SSRP1-204ENST00000529002 ZNF711Q9Y462 761 aa18.48■□□□□ 0.55
SSRP1-204ENST00000529002 LGALS16A8MUM7 142 aa18.47■□□□□ 0.55
SSRP1-204ENST00000529002 TMEM150CB9EJG8 249 aa18.47■□□□□ 0.55
SSRP1-204ENST00000529002 GPR39O43194 453 aa18.47■□□□□ 0.55
SSRP1-204ENST00000529002 LDB2O43679 373 aa18.47■□□□□ 0.55
SSRP1-204ENST00000529002 POP7O75817 140 aaKnown RBP18.47■□□□□ 0.55
SSRP1-204ENST00000529002 CCNCP24863 283 aa18.47■□□□□ 0.55
SSRP1-204ENST00000529002 PBLDP30039 288 aaPredicted RBP18.47■□□□□ 0.55
SSRP1-204ENST00000529002 MYBPC3Q14896 1274 aa18.47■□□□□ 0.55
SSRP1-204ENST00000529002 IFI16Q16666 785 aaKnown RBP18.47■□□□□ 0.55
SSRP1-204ENST00000529002 ATP13A4Q4VNC1 1196 aa18.47■□□□□ 0.55
SSRP1-204ENST00000529002 CCDC122Q5T0U0 273 aa18.47■□□□□ 0.55
SSRP1-204ENST00000529002 TMTC4Q5T4D3 741 aa18.47■□□□□ 0.55
SSRP1-204ENST00000529002 TIGD7Q6NT04 549 aaPredicted RBP18.47■□□□□ 0.55
SSRP1-204ENST00000529002 IGFL3Q6UXB1 125 aa18.47■□□□□ 0.55
SSRP1-204ENST00000529002 Q6ZS92 163 aa18.47■□□□□ 0.55
SSRP1-204ENST00000529002 ZNF571Q7Z3V5 609 aaPredicted RBP18.47■□□□□ 0.55
SSRP1-204ENST00000529002 CPNE8Q86YQ8 564 aa18.47■□□□□ 0.55
SSRP1-204ENST00000529002 RAB43Q86YS6 212 aa18.47■□□□□ 0.55
SSRP1-204ENST00000529002 LRRC49Q8IUZ0 686 aa18.47■□□□□ 0.55
SSRP1-204ENST00000529002 OR8K5Q8NH50 307 aa18.47■□□□□ 0.55
SSRP1-204ENST00000529002 GDAP1Q8TB36 358 aa18.47■□□□□ 0.55
SSRP1-204ENST00000529002 NAT14Q8WUY8 206 aa18.47■□□□□ 0.55
SSRP1-204ENST00000529002 TRIB3Q96RU7 358 aa18.47■□□□□ 0.55
SSRP1-204ENST00000529002 INSM2Q96T92 566 aaPredicted RBP18.47■□□□□ 0.55
SSRP1-204ENST00000529002 CEP41Q9BYV8 373 aa18.47■□□□□ 0.55
SSRP1-204ENST00000529002 GPR63Q9BZJ6 419 aa18.47■□□□□ 0.55
SSRP1-204ENST00000529002 SNRNP200O75643 2136 aaKnown RBP18.46■□□□□ 0.55
SSRP1-204ENST00000529002 KCNK1O00180 336 aa18.46■□□□□ 0.55
SSRP1-204ENST00000529002 KLF7O75840 302 aaPredicted RBP18.46■□□□□ 0.55
SSRP1-204ENST00000529002 SNRPB2P08579 225 aaKnown RBP18.46■□□□□ 0.55
SSRP1-204ENST00000529002 MTHFD1P11586 935 aaKnown RBP18.46■□□□□ 0.55
SSRP1-204ENST00000529002 VCLP18206 1134 aa18.46■□□□□ 0.55
SSRP1-204ENST00000529002 POLR2CP19387 275 aaPredicted RBP18.46■□□□□ 0.55
SSRP1-204ENST00000529002 GBE1Q04446 702 aa18.46■□□□□ 0.55
SSRP1-204ENST00000529002 SLC10A2Q12908 348 aaPredicted RBP18.46■□□□□ 0.55
SSRP1-204ENST00000529002 PAFAH1B3Q15102 231 aaKnown RBP18.46■□□□□ 0.55
SSRP1-204ENST00000529002 HIF1AQ16665 826 aa18.46■□□□□ 0.55
SSRP1-204ENST00000529002 E4F1Q66K89 784 aaPredicted RBP18.46■□□□□ 0.55
SSRP1-204ENST00000529002 PDPK2PQ6A1A2 396 aa18.46■□□□□ 0.55
SSRP1-204ENST00000529002 FJX1Q86VR8 437 aa18.46■□□□□ 0.55
SSRP1-204ENST00000529002 AMZ2Q86W34 360 aa18.46■□□□□ 0.55
SSRP1-204ENST00000529002 OOSP2Q86WS3 158 aa18.46■□□□□ 0.55
SSRP1-204ENST00000529002 CNTD1Q8N815 330 aa18.46■□□□□ 0.55
SSRP1-204ENST00000529002 RASGEF1AQ8N9B8 481 aa18.46■□□□□ 0.55
SSRP1-204ENST00000529002 SPDYE1Q8NFV5 336 aaPredicted RBP18.46■□□□□ 0.55
SSRP1-204ENST00000529002 TEKT4Q8WW24 435 aa18.46■□□□□ 0.55
SSRP1-204ENST00000529002 ERGIC2Q96RQ1 377 aa18.46■□□□□ 0.55
SSRP1-204ENST00000529002 ADGRE3Q9BY15 652 aa18.46■□□□□ 0.55
SSRP1-204ENST00000529002 KLHL25Q9H0H3 589 aa18.46■□□□□ 0.55
SSRP1-204ENST00000529002 HAUS4Q9H6D7 363 aa18.46■□□□□ 0.55
SSRP1-204ENST00000529002 NFKBIL1Q9UBC1 381 aaPredicted RBP18.46■□□□□ 0.55
SSRP1-204ENST00000529002 SPO11Q9Y5K1 396 aa18.46■□□□□ 0.55
SSRP1-204ENST00000529002 AKAP9Q99996 3911 aa18.45■□□□□ 0.54
SSRP1-204ENST00000529002 OR2AG2A6NM03 316 aa18.45■□□□□ 0.54
SSRP1-204ENST00000529002 DDX3XO00571 662 aaKnown RBP eCLIP18.45■□□□□ 0.549e-13■■■■■ 33.9
SSRP1-204ENST00000529002 GJC1P36383 396 aa18.45■□□□□ 0.54
SSRP1-204ENST00000529002 PER3P56645 1201 aa18.45■□□□□ 0.54
SSRP1-204ENST00000529002 ZBTB17Q13105 803 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms