RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 RASGRP3Q8IV61 690 aa8.91□□□□□ -0.98
CMTM1-210ENST00000528441 RBM12BQ8IXT5 1001 aaKnown RBP8.91□□□□□ -0.98
CMTM1-210ENST00000528441 OR6P1Q8NGX9 317 aa8.91□□□□□ -0.98
CMTM1-210ENST00000528441 STYXQ8WUJ0 223 aa8.91□□□□□ -0.98
CMTM1-210ENST00000528441 KIAA1143Q96AT1 154 aaPredicted RBP8.91□□□□□ -0.98
CMTM1-210ENST00000528441 RNF31Q96EP0 1072 aa8.91□□□□□ -0.98
CMTM1-210ENST00000528441 ZDHHC12Q96GR4 267 aa8.91□□□□□ -0.98
CMTM1-210ENST00000528441 ELMO2Q96JJ3 720 aa8.91□□□□□ -0.98
CMTM1-210ENST00000528441 PDLIM2Q96JY6 352 aa8.91□□□□□ -0.98
CMTM1-210ENST00000528441 WWP1Q9H0M0 922 aa8.91□□□□□ -0.98
CMTM1-210ENST00000528441 ETNK1Q9HBU6 452 aa8.91□□□□□ -0.98
CMTM1-210ENST00000528441 SMARCAL1Q9NZC9 954 aa8.91□□□□□ -0.98
CMTM1-210ENST00000528441 FOXJ2Q9P0K8 574 aa8.91□□□□□ -0.98
CMTM1-210ENST00000528441 SCHIP1Q9P0W5 487 aaPredicted RBP8.91□□□□□ -0.98
CMTM1-210ENST00000528441 PPP2R2CQ9Y2T4 447 aa8.91□□□□□ -0.98
CMTM1-210ENST00000528441 PCDHGA7Q9Y5G6 932 aa8.91□□□□□ -0.98
CMTM1-210ENST00000528441 COL27A1Q8IZC6 1860 aaPredicted RBP8.9□□□□□ -0.98
CMTM1-210ENST00000528441 TEX51A0A1B0GUA7 166 aa8.9□□□□□ -0.98
CMTM1-210ENST00000528441 A0A1W2PNU3 283 aaPredicted RBP8.9□□□□□ -0.98
CMTM1-210ENST00000528441 UBA6A0AVT1 1052 aaPredicted RBP8.9□□□□□ -0.98
CMTM1-210ENST00000528441 HEATR9A2RTY3 570 aa8.9□□□□□ -0.98
CMTM1-210ENST00000528441 GSAPA4D1B5 854 aa8.9□□□□□ -0.98
CMTM1-210ENST00000528441 MGAT4DA6NG13 374 aa8.9□□□□□ -0.98
CMTM1-210ENST00000528441 ERI2A8K979 691 aaKnown RBP8.9□□□□□ -0.98
CMTM1-210ENST00000528441 POLR1CO15160 346 aaPredicted RBP8.9□□□□□ -0.98
CMTM1-210ENST00000528441 GPR37O15354 613 aa8.9□□□□□ -0.98
CMTM1-210ENST00000528441 NVLO15381 856 aaKnown RBP8.9□□□□□ -0.98
CMTM1-210ENST00000528441 ATP1B2P14415 290 aaPredicted RBP8.9□□□□□ -0.98
CMTM1-210ENST00000528441 ETS1P14921 441 aa8.9□□□□□ -0.98
CMTM1-210ENST00000528441 XRCC1P18887 633 aaPredicted RBP8.9□□□□□ -0.98
CMTM1-210ENST00000528441 CD82P27701 267 aa8.9□□□□□ -0.98
CMTM1-210ENST00000528441 ADRA1AP35348 466 aa8.9□□□□□ -0.98
CMTM1-210ENST00000528441 PPARGP37231 505 aaPredicted RBP8.9□□□□□ -0.98
CMTM1-210ENST00000528441 ZNF140P52738 457 aaPredicted RBP8.9□□□□□ -0.98
CMTM1-210ENST00000528441 GFERP55789 205 aa8.9□□□□□ -0.98
CMTM1-210ENST00000528441 SESN2P58004 480 aaPredicted RBP8.9□□□□□ -0.98
CMTM1-210ENST00000528441 CACNG1Q06432 222 aa8.9□□□□□ -0.98
CMTM1-210ENST00000528441 CLN3Q13286 438 aa8.9□□□□□ -0.98
CMTM1-210ENST00000528441 KLF1Q13351 362 aaPredicted RBP8.9□□□□□ -0.98
CMTM1-210ENST00000528441 BOP1Q14137 746 aaKnown RBP8.9□□□□□ -0.98
CMTM1-210ENST00000528441 GPR18Q14330 331 aa8.9□□□□□ -0.98
CMTM1-210ENST00000528441 CLCA4Q14CN2 919 aa8.9□□□□□ -0.98
CMTM1-210ENST00000528441 BRD3Q15059 726 aa8.9□□□□□ -0.98
CMTM1-210ENST00000528441 FASTKD1Q53R41 847 aaKnown RBP8.9□□□□□ -0.98
CMTM1-210ENST00000528441 DNTTIP2Q5QJE6 756 aaKnown RBP8.9□□□□□ -0.98
CMTM1-210ENST00000528441 CACHD1Q5VU97 1274 aa8.9□□□□□ -0.98
CMTM1-210ENST00000528441 KIAA1614Q5VZ46 1190 aa8.9□□□□□ -0.98
CMTM1-210ENST00000528441 ANKS6Q68DC2 871 aa8.9□□□□□ -0.98
CMTM1-210ENST00000528441 DUS1LQ6P1R4 473 aaKnown RBP8.9□□□□□ -0.98
CMTM1-210ENST00000528441 CYB5D1Q6P9G0 228 aa8.9□□□□□ -0.98
CMTM1-210ENST00000528441 IGF2-ASQ6U949 168 aa8.9□□□□□ -0.98
CMTM1-210ENST00000528441 PRUNE1Q86TP1 453 aa8.9□□□□□ -0.98
CMTM1-210ENST00000528441 SERPINA9Q86WD7 417 aa8.9□□□□□ -0.98
CMTM1-210ENST00000528441 ZNF547Q8IVP9 402 aa8.9□□□□□ -0.98
CMTM1-210ENST00000528441 NXPE1Q8N323 547 aa8.9□□□□□ -0.98
CMTM1-210ENST00000528441 GSDMBQ8TAX9 411 aa8.9□□□□□ -0.98
CMTM1-210ENST00000528441 SLC35B2Q8TB61 432 aa8.9□□□□□ -0.98
CMTM1-210ENST00000528441 HM13Q8TCT9 377 aa8.9□□□□□ -0.98
CMTM1-210ENST00000528441 UBE2Q2Q8WVN8 375 aa8.9□□□□□ -0.98
CMTM1-210ENST00000528441 FERD3LQ96RJ6 166 aa8.9□□□□□ -0.98
CMTM1-210ENST00000528441 GORASP1Q9BQQ3 440 aa8.9□□□□□ -0.98
CMTM1-210ENST00000528441 TSSK1BQ9BXA7 367 aa8.9□□□□□ -0.98
CMTM1-210ENST00000528441 ASPSCR1Q9BZE9 553 aa8.9□□□□□ -0.98
CMTM1-210ENST00000528441 SLC7A5P2Q9GIP4 190 aa8.9□□□□□ -0.98
CMTM1-210ENST00000528441 SMOXQ9NWM0 555 aa8.9□□□□□ -0.98
CMTM1-210ENST00000528441 OCIAD1Q9NX40 245 aa8.9□□□□□ -0.98
CMTM1-210ENST00000528441 SOHLH2Q9NX45 425 aa8.9□□□□□ -0.98
CMTM1-210ENST00000528441 ZDHHC3Q9NYG2 299 aa8.9□□□□□ -0.98
CMTM1-210ENST00000528441 ACSL5Q9ULC5 683 aa8.9□□□□□ -0.98
CMTM1-210ENST00000528441 DNMT3AQ9Y6K1 912 aaPredicted RBP8.9□□□□□ -0.98
CMTM1-210ENST00000528441 COLEC10Q9Y6Z7 277 aa8.9□□□□□ -0.98
CMTM1-210ENST00000528441 ASPMQ8IZT6 3477 aa8.89□□□□□ -0.99
CMTM1-210ENST00000528441 GOLGA6L10A0A0M3HER8 536 aa8.89□□□□□ -0.99
CMTM1-210ENST00000528441 C9orf172C9J069 976 aa8.89□□□□□ -0.99
CMTM1-210ENST00000528441 ZSCAN12O43309 604 aa8.89□□□□□ -0.99
CMTM1-210ENST00000528441 RAD1O60671 282 aa8.89□□□□□ -0.99
CMTM1-210ENST00000528441 FTH1P02794 183 aa8.89□□□□□ -0.99
CMTM1-210ENST00000528441 OR56A5P0C7T3 313 aa8.89□□□□□ -0.99
CMTM1-210ENST00000528441 ZSCAN5DPP0CG00 497 aa8.89□□□□□ -0.99
CMTM1-210ENST00000528441 FGF3P11487 239 aaPredicted RBP8.89□□□□□ -0.99
CMTM1-210ENST00000528441 MTHFD1P11586 935 aaKnown RBP8.89□□□□□ -0.99
CMTM1-210ENST00000528441 ITGB6P18564 788 aa8.89□□□□□ -0.99
CMTM1-210ENST00000528441 ACRV1P26436 265 aa8.89□□□□□ -0.99
CMTM1-210ENST00000528441 NDUFS1P28331 727 aa8.89□□□□□ -0.99
CMTM1-210ENST00000528441 CAPZBP47756 277 aa8.89□□□□□ -0.99
CMTM1-210ENST00000528441 CSE1LP55060 971 aaKnown RBP8.89□□□□□ -0.99
CMTM1-210ENST00000528441 UBE2IP63279 158 aaKnown RBP8.89□□□□□ -0.99
CMTM1-210ENST00000528441 SARNPP82979 210 aaKnown RBP8.89□□□□□ -0.99
CMTM1-210ENST00000528441 RHDQ02161 417 aa8.89□□□□□ -0.99
CMTM1-210ENST00000528441 TRIP13Q15645 432 aaPredicted RBP8.89□□□□□ -0.99
CMTM1-210ENST00000528441 RPE65Q16518 533 aa8.89□□□□□ -0.99
CMTM1-210ENST00000528441 GPR33Q49SQ1 333 aa8.89□□□□□ -0.99
CMTM1-210ENST00000528441 CASC4Q6P4E1 433 aa8.89□□□□□ -0.99
CMTM1-210ENST00000528441 WDR74Q6RFH5 385 aaPredicted RBP8.89□□□□□ -0.99
CMTM1-210ENST00000528441 AFTPHQ6ULP2 937 aa8.89□□□□□ -0.99
CMTM1-210ENST00000528441 ABRAXAS1Q6UWZ7 409 aa8.89□□□□□ -0.99
CMTM1-210ENST00000528441 ZNF574Q6ZN55 896 aaPredicted RBP8.89□□□□□ -0.99
CMTM1-210ENST00000528441 FAM83HQ6ZRV2 1179 aaPredicted RBP8.89□□□□□ -0.99
CMTM1-210ENST00000528441 CACNA2D3Q8IZS8 1091 aa8.89□□□□□ -0.99
CMTM1-210ENST00000528441 SIDT2Q8NBJ9 832 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms