RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 GPR1P46091 355 aa18.51■□□□□ 0.55
SMPD1-203ENST00000527275 GPRC6AQ5T6X5 926 aa18.51■□□□□ 0.55
SMPD1-203ENST00000527275 NLRP8Q86W28 1048 aa18.51■□□□□ 0.55
SMPD1-203ENST00000527275 BTN2A2Q8WVV5 523 aa18.51■□□□□ 0.55
SMPD1-203ENST00000527275 BIRC8Q96P09 236 aa18.51■□□□□ 0.55
SMPD1-203ENST00000527275 TTC1Q99614 292 aa18.51■□□□□ 0.55
SMPD1-203ENST00000527275 MBNL1Q9NR56 388 aaKnown RBP18.51■□□□□ 0.55
SMPD1-203ENST00000527275 DNAJC28Q9NX36 388 aa18.51■□□□□ 0.55
SMPD1-203ENST00000527275 WSB2Q9NYS7 404 aaPredicted RBP18.51■□□□□ 0.55
SMPD1-203ENST00000527275 DNAH14Q0VDD8 3507 aa18.51■□□□□ 0.55
SMPD1-203ENST00000527275 SLC31A1O15431 190 aa18.51■□□□□ 0.55
SMPD1-203ENST00000527275 MTX2O75431 263 aa18.51■□□□□ 0.55
SMPD1-203ENST00000527275 RASSF9O75901 435 aa18.51■□□□□ 0.55
SMPD1-203ENST00000527275 RHOBTB1O94844 696 aa18.51■□□□□ 0.55
SMPD1-203ENST00000527275 CHRNGP07510 517 aa18.51■□□□□ 0.55
SMPD1-203ENST00000527275 TFEBP19484 476 aa18.51■□□□□ 0.55
SMPD1-203ENST00000527275 CD6P30203 668 aa18.51■□□□□ 0.55
SMPD1-203ENST00000527275 PPARGP37231 505 aaPredicted RBP18.51■□□□□ 0.55
SMPD1-203ENST00000527275 PTGER3P43115 390 aa18.51■□□□□ 0.55
SMPD1-203ENST00000527275 RASSF2P50749 326 aa18.51■□□□□ 0.55
SMPD1-203ENST00000527275 DNAJB13P59910 316 aa18.51■□□□□ 0.55
SMPD1-203ENST00000527275 PDAP1Q13442 181 aaKnown RBP18.51■□□□□ 0.55
SMPD1-203ENST00000527275 ARL13AQ5H913 290 aaPredicted RBP18.51■□□□□ 0.55
SMPD1-203ENST00000527275 ISCA2Q86U28 154 aa18.51■□□□□ 0.55
SMPD1-203ENST00000527275 CLDN19Q8N6F1 224 aa18.51■□□□□ 0.55
SMPD1-203ENST00000527275 GLYATL1Q969I3 302 aa18.51■□□□□ 0.55
SMPD1-203ENST00000527275 NSL1Q96IY1 281 aa18.51■□□□□ 0.55
SMPD1-203ENST00000527275 COPS8Q99627 209 aa18.51■□□□□ 0.55
SMPD1-203ENST00000527275 C6orf106Q9H6K1 298 aaPredicted RBP18.51■□□□□ 0.55
SMPD1-203ENST00000527275 ARL8BQ9NVJ2 186 aa18.51■□□□□ 0.55
SMPD1-203ENST00000527275 SPATA6Q9NWH7 488 aaPredicted RBP18.51■□□□□ 0.55
SMPD1-203ENST00000527275 KCTD5Q9NXV2 234 aa18.51■□□□□ 0.55
SMPD1-203ENST00000527275 APOBEC2Q9Y235 224 aaKnown RBP18.51■□□□□ 0.55
SMPD1-203ENST00000527275 RAP2CQ9Y3L5 183 aa18.51■□□□□ 0.55
SMPD1-203ENST00000527275 WDFY4Q6ZS81 3184 aa18.51■□□□□ 0.55
SMPD1-203ENST00000527275 NEMP2A6NFY4 417 aa18.5■□□□□ 0.55
SMPD1-203ENST00000527275 SLC25A14O95258 325 aaPredicted RBP18.5■□□□□ 0.55
SMPD1-203ENST00000527275 OXTRP30559 389 aa18.5■□□□□ 0.55
SMPD1-203ENST00000527275 IDH3AP50213 366 aa18.5■□□□□ 0.55
SMPD1-203ENST00000527275 KRT72Q14CN4 511 aa18.5■□□□□ 0.55
SMPD1-203ENST00000527275 LYPLAL1Q5VWZ2 237 aa18.5■□□□□ 0.55
SMPD1-203ENST00000527275 FAM91A1Q658Y4 838 aa18.5■□□□□ 0.55
SMPD1-203ENST00000527275 TRIM69Q86WT6 500 aa18.5■□□□□ 0.55
SMPD1-203ENST00000527275 RBFAQ8N0V3 343 aa18.5■□□□□ 0.55
SMPD1-203ENST00000527275 CCNYL1Q8N7R7 359 aa18.5■□□□□ 0.55
SMPD1-203ENST00000527275 FAM136AQ96C01 138 aa18.5■□□□□ 0.55
SMPD1-203ENST00000527275 ULK4Q96C45 1275 aa18.5■□□□□ 0.55
SMPD1-203ENST00000527275 SLC7A6OSQ96CW6 309 aaPredicted RBP18.5■□□□□ 0.55
SMPD1-203ENST00000527275 CCDC126Q96EE4 140 aa18.5■□□□□ 0.55
SMPD1-203ENST00000527275 LENG8Q96PV6 779 aaPredicted RBP18.5■□□□□ 0.55
SMPD1-203ENST00000527275 TMEM237Q96Q45 408 aa18.5■□□□□ 0.55
SMPD1-203ENST00000527275 VPS35Q96QK1 796 aa18.5■□□□□ 0.55
SMPD1-203ENST00000527275 GPR174Q9BXC1 333 aa18.5■□□□□ 0.55
SMPD1-203ENST00000527275 ALG9Q9H6U8 611 aa18.5■□□□□ 0.55
SMPD1-203ENST00000527275 FZD3Q9NPG1 666 aa18.5■□□□□ 0.55
SMPD1-203ENST00000527275 ZDHHC3Q9NYG2 299 aa18.5■□□□□ 0.55
SMPD1-203ENST00000527275 TAS2R13Q9NYV9 303 aa18.5■□□□□ 0.55
SMPD1-203ENST00000527275 ARMCX1Q9P291 453 aa18.5■□□□□ 0.55
SMPD1-203ENST00000527275 CNOT6Q9ULM6 557 aaKnown RBP18.5■□□□□ 0.55
SMPD1-203ENST00000527275 IGHV1OR15-9A0A0B4J2B8 117 aa18.49■□□□□ 0.55
SMPD1-203ENST00000527275 RAD51BO15315 384 aa18.49■□□□□ 0.55
SMPD1-203ENST00000527275 PCCBP05166 539 aa18.49■□□□□ 0.55
SMPD1-203ENST00000527275 SERPINA6P08185 405 aa18.49■□□□□ 0.55
SMPD1-203ENST00000527275 CD1DP15813 335 aa18.49■□□□□ 0.55
SMPD1-203ENST00000527275 CCR10P46092 362 aa18.49■□□□□ 0.55
SMPD1-203ENST00000527275 ADARP55265 1226 aaKnown RBP18.49■□□□□ 0.55
SMPD1-203ENST00000527275 B4GALNT1Q00973 533 aa18.49■□□□□ 0.55
SMPD1-203ENST00000527275 TUBB3Q13509 450 aa18.49■□□□□ 0.55
SMPD1-203ENST00000527275 KHDC1Q4VXA5 237 aaKnown RBP18.49■□□□□ 0.55
SMPD1-203ENST00000527275 CFAP157Q5JU67 520 aa18.49■□□□□ 0.55
SMPD1-203ENST00000527275 PNCKQ6P2M8 343 aa18.49■□□□□ 0.55
SMPD1-203ENST00000527275 TSSK4Q6SA08 328 aa18.49■□□□□ 0.55
SMPD1-203ENST00000527275 TP53I13Q8NBR0 393 aaPredicted RBP18.49■□□□□ 0.55
SMPD1-203ENST00000527275 INPP5DQ92835 1189 aa18.49■□□□□ 0.55
SMPD1-203ENST00000527275 LRMDAQ9H2I8 198 aa18.49■□□□□ 0.55
SMPD1-203ENST00000527275 NCKIPSDQ9NZQ3 722 aa18.49■□□□□ 0.55
SMPD1-203ENST00000527275 INVSQ9Y283 1065 aa18.49■□□□□ 0.55
SMPD1-203ENST00000527275 PIKFYVEQ9Y2I7 2098 aa18.49■□□□□ 0.55
SMPD1-203ENST00000527275 PRMT5O14744 637 aaPredicted RBP18.49■□□□□ 0.55
SMPD1-203ENST00000527275 NPHS1O60500 1241 aa18.49■□□□□ 0.55
SMPD1-203ENST00000527275 ZNF37AP17032 561 aaPredicted RBP18.49■□□□□ 0.55
SMPD1-203ENST00000527275 ZNF7P17097 686 aaPredicted RBP18.49■□□□□ 0.55
SMPD1-203ENST00000527275 MPSTP25325 297 aa18.49■□□□□ 0.55
SMPD1-203ENST00000527275 KCNC1P48547 511 aa18.49■□□□□ 0.55
SMPD1-203ENST00000527275 RPL14P50914 215 aaKnown RBP18.49■□□□□ 0.55
SMPD1-203ENST00000527275 ALDH18A1P54886 795 aaKnown RBP18.49■□□□□ 0.55
SMPD1-203ENST00000527275 PRKAA1Q13131 559 aa18.49■□□□□ 0.55
SMPD1-203ENST00000527275 INPP5AQ14642 412 aa18.49■□□□□ 0.55
SMPD1-203ENST00000527275 IRF4Q15306 451 aa18.49■□□□□ 0.55
SMPD1-203ENST00000527275 ZNF648Q5T619 568 aaPredicted RBP18.49■□□□□ 0.55
SMPD1-203ENST00000527275 LSMEM2Q8N112 164 aa18.49■□□□□ 0.55
SMPD1-203ENST00000527275 AGR3Q8TD06 166 aa18.49■□□□□ 0.55
SMPD1-203ENST00000527275 MYOCQ99972 504 aa18.49■□□□□ 0.55
SMPD1-203ENST00000527275 P2RY12Q9H244 342 aa18.49■□□□□ 0.55
SMPD1-203ENST00000527275 COG4Q9H9E3 785 aa18.49■□□□□ 0.55
SMPD1-203ENST00000527275 SYTL2Q9HCH5 934 aa18.49■□□□□ 0.55
SMPD1-203ENST00000527275 MBD1Q9UIS9 605 aaPredicted RBP18.49■□□□□ 0.55
SMPD1-203ENST00000527275 MED16Q9Y2X0 877 aa18.49■□□□□ 0.55
SMPD1-203ENST00000527275 IGLV3-16A0A075B6K0 115 aa18.48■□□□□ 0.55
SMPD1-203ENST00000527275 A8MT66 165 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms