RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 ERRFI1Q9UJM3 462 aaPredicted RBP10.78□□□□□ -0.68
NEDD8-204ENST00000526430 TMPRSS11EQ9UL52 423 aa10.78□□□□□ -0.68
NEDD8-204ENST00000526430 SHOC2Q9UQ13 582 aa10.78□□□□□ -0.68
NEDD8-204ENST00000526430 ZNF711Q9Y462 761 aa10.78□□□□□ -0.68
NEDD8-204ENST00000526430 PCSK5Q92824 1860 aa10.78□□□□□ -0.68
NEDD8-204ENST00000526430 DCHS2Q6V1P9 2916 aa10.77□□□□□ -0.69
NEDD8-204ENST00000526430 IGHV5-10-1A0A0J9YXX1 117 aa10.77□□□□□ -0.69
NEDD8-204ENST00000526430 LOC101059948A0A1B0GTJ6 334 aa10.77□□□□□ -0.69
NEDD8-204ENST00000526430 MROH6A6NGR9 719 aa10.77□□□□□ -0.69
NEDD8-204ENST00000526430 B4E171 279 aa10.77□□□□□ -0.69
NEDD8-204ENST00000526430 PSMD11O00231 422 aa10.77□□□□□ -0.69
NEDD8-204ENST00000526430 DNALI1O14645 258 aaPredicted RBP10.77□□□□□ -0.69
NEDD8-204ENST00000526430 BUD23O43709 281 aaKnown RBP10.77□□□□□ -0.69
NEDD8-204ENST00000526430 AVILO75366 819 aa10.77□□□□□ -0.69
NEDD8-204ENST00000526430 RFPL1O75677 317 aa10.77□□□□□ -0.69
NEDD8-204ENST00000526430 TM7SF2O76062 418 aa10.77□□□□□ -0.69
NEDD8-204ENST00000526430 SORBS2O94875 1100 aaKnown RBP10.77□□□□□ -0.69
NEDD8-204ENST00000526430 FGF1P05230 155 aa10.77□□□□□ -0.69
NEDD8-204ENST00000526430 PRF1P14222 555 aa10.77□□□□□ -0.69
NEDD8-204ENST00000526430 TCN2P20062 427 aa10.77□□□□□ -0.69
NEDD8-204ENST00000526430 HMGCLP35914 325 aa10.77□□□□□ -0.69
NEDD8-204ENST00000526430 TSPAN7P41732 249 aa10.77□□□□□ -0.69
NEDD8-204ENST00000526430 RPL21P46778 160 aaKnown RBP10.77□□□□□ -0.69
NEDD8-204ENST00000526430 TERF1P54274 439 aa10.77□□□□□ -0.69
NEDD8-204ENST00000526430 BASP1P80723 227 aaKnown RBP10.77□□□□□ -0.69
NEDD8-204ENST00000526430 B4GALNT1Q00973 533 aa10.77□□□□□ -0.69
NEDD8-204ENST00000526430 DHX34Q14147 1143 aaKnown RBP10.77□□□□□ -0.69
NEDD8-204ENST00000526430 ARHGEF7Q14155 803 aa10.77□□□□□ -0.69
NEDD8-204ENST00000526430 HLTFQ14527 1009 aaKnown RBP eCLIP10.77□□□□□ -0.69
NEDD8-204ENST00000526430 NR1D2Q14995 579 aa10.77□□□□□ -0.69
NEDD8-204ENST00000526430 ALG11Q2TAA5 492 aa10.77□□□□□ -0.69
NEDD8-204ENST00000526430 EIF2S3LQ2VIR3 472 aaKnown RBP10.77□□□□□ -0.69
NEDD8-204ENST00000526430 C14orf28Q4W4Y0 310 aa10.77□□□□□ -0.69
NEDD8-204ENST00000526430 CFAP58Q5T655 872 aa10.77□□□□□ -0.69
NEDD8-204ENST00000526430 DCAF12Q5T6F0 453 aa10.77□□□□□ -0.69
NEDD8-204ENST00000526430 HIBCHQ6NVY1 386 aaPredicted RBP10.77□□□□□ -0.69
NEDD8-204ENST00000526430 ERAP2Q6P179 960 aa10.77□□□□□ -0.69
NEDD8-204ENST00000526430 LRRC8BQ6P9F7 803 aa10.77□□□□□ -0.69
NEDD8-204ENST00000526430 SYDE1Q6ZW31 735 aaPredicted RBP10.77□□□□□ -0.69
NEDD8-204ENST00000526430 USP45Q70EL2 814 aa10.77□□□□□ -0.69
NEDD8-204ENST00000526430 HID1Q8IV36 788 aa10.77□□□□□ -0.69
NEDD8-204ENST00000526430 AGBL5Q8NDL9 886 aa10.77□□□□□ -0.69
NEDD8-204ENST00000526430 RCBTB1Q8NDN9 531 aa10.77□□□□□ -0.69
NEDD8-204ENST00000526430 GPR26Q8NDV2 337 aa10.77□□□□□ -0.69
NEDD8-204ENST00000526430 GRK7Q8WTQ7 553 aa10.77□□□□□ -0.69
NEDD8-204ENST00000526430 SEC14L1Q92503 715 aa10.77□□□□□ -0.69
NEDD8-204ENST00000526430 SCAMP4Q969E2 229 aa10.77□□□□□ -0.69
NEDD8-204ENST00000526430 MARVELD3Q96A59 401 aa10.77□□□□□ -0.69
NEDD8-204ENST00000526430 ZNF778Q96MU6 729 aa10.77□□□□□ -0.69
NEDD8-204ENST00000526430 PWWP2AQ96N64 755 aa10.77□□□□□ -0.69
NEDD8-204ENST00000526430 CARD6Q9BX69 1037 aa10.77□□□□□ -0.69
NEDD8-204ENST00000526430 C1QTNF7Q9BXJ2 289 aa10.77□□□□□ -0.69
NEDD8-204ENST00000526430 ABCG8Q9H221 673 aa10.77□□□□□ -0.69
NEDD8-204ENST00000526430 RDH14Q9HBH5 336 aa10.77□□□□□ -0.69
NEDD8-204ENST00000526430 CYP4F12Q9HCS2 524 aa10.77□□□□□ -0.69
NEDD8-204ENST00000526430 DMGDHQ9UI17 866 aaKnown RBP10.77□□□□□ -0.69
NEDD8-204ENST00000526430 CNOT6Q9ULM6 557 aaKnown RBP10.77□□□□□ -0.69
NEDD8-204ENST00000526430 ANKHD1Q8IWZ3 2542 aaKnown RBP10.77□□□□□ -0.69
NEDD8-204ENST00000526430 PKDREJQ9NTG1 2253 aa10.76□□□□□ -0.69
NEDD8-204ENST00000526430 C1orf232A0A0U1RR37 186 aa10.76□□□□□ -0.69
NEDD8-204ENST00000526430 FAM187AA6NFU0 413 aa10.76□□□□□ -0.69
NEDD8-204ENST00000526430 TCP11X1B4DZS4 312 aa10.76□□□□□ -0.69
NEDD8-204ENST00000526430 GAS8O95995 478 aa10.76□□□□□ -0.69
NEDD8-204ENST00000526430 FUCA1P04066 466 aa10.76□□□□□ -0.69
NEDD8-204ENST00000526430 CYP2A6P11509 494 aaPredicted RBP10.76□□□□□ -0.69
NEDD8-204ENST00000526430 ZNF30P17039 623 aa10.76□□□□□ -0.69
NEDD8-204ENST00000526430 BPIP17213 487 aa10.76□□□□□ -0.69
NEDD8-204ENST00000526430 CA4P22748 312 aa10.76□□□□□ -0.69
NEDD8-204ENST00000526430 XPAP23025 273 aaPredicted RBP10.76□□□□□ -0.69
NEDD8-204ENST00000526430 TRIM23P36406 574 aa10.76□□□□□ -0.69
NEDD8-204ENST00000526430 ADCY8P40145 1251 aa10.76□□□□□ -0.69
NEDD8-204ENST00000526430 SPINT3P49223 89 aa10.76□□□□□ -0.69
NEDD8-204ENST00000526430 LIMK2P53671 638 aa10.76□□□□□ -0.69
NEDD8-204ENST00000526430 EPHB1P54762 984 aa10.76□□□□□ -0.69
NEDD8-204ENST00000526430 XIAPP98170 497 aa10.76□□□□□ -0.69
NEDD8-204ENST00000526430 CKAP4Q07065 602 aaKnown RBP10.76□□□□□ -0.69
NEDD8-204ENST00000526430 MSS51Q4VC12 460 aa10.76□□□□□ -0.69
NEDD8-204ENST00000526430 FNBP1LQ5T0N5 605 aa10.76□□□□□ -0.69
NEDD8-204ENST00000526430 KCTD16Q68DU8 428 aa10.76□□□□□ -0.69
NEDD8-204ENST00000526430 ZNF438Q7Z4V0 828 aa10.76□□□□□ -0.69
NEDD8-204ENST00000526430 NLRP8Q86W28 1048 aa10.76□□□□□ -0.69
NEDD8-204ENST00000526430 RAVER1Q8IY67 606 aaKnown RBP10.76□□□□□ -0.69
NEDD8-204ENST00000526430 MPP5Q8N3R9 675 aa10.76□□□□□ -0.69
NEDD8-204ENST00000526430 PRR7Q8TB68 274 aa10.76□□□□□ -0.69
NEDD8-204ENST00000526430 BRSK1Q8TDC3 778 aa10.76□□□□□ -0.69
NEDD8-204ENST00000526430 CXorf40AQ8TE69 158 aa10.76□□□□□ -0.69
NEDD8-204ENST00000526430 DTD2Q96FN9 168 aa10.76□□□□□ -0.69
NEDD8-204ENST00000526430 SIGLEC10Q96LC7 697 aa10.76□□□□□ -0.69
NEDD8-204ENST00000526430 CCDC74BQ96LY2 380 aa10.76□□□□□ -0.69
NEDD8-204ENST00000526430 RUNDC3BQ96NL0 473 aa10.76□□□□□ -0.69
NEDD8-204ENST00000526430 PPP1R2P1Q96PQ5 205 aa10.76□□□□□ -0.69
NEDD8-204ENST00000526430 NUDT22Q9BRQ3 303 aa10.76□□□□□ -0.69
NEDD8-204ENST00000526430 WDR83Q9BRX9 315 aaKnown RBP10.76□□□□□ -0.69
NEDD8-204ENST00000526430 ERP44Q9BS26 406 aa10.76□□□□□ -0.69
NEDD8-204ENST00000526430 FSD1LQ9BXM9 530 aa10.76□□□□□ -0.69
NEDD8-204ENST00000526430 SLC29A3Q9BZD2 475 aa10.76□□□□□ -0.69
NEDD8-204ENST00000526430 TRIT1Q9H3H1 467 aaKnown RBP10.76□□□□□ -0.69
NEDD8-204ENST00000526430 ZFYVE1Q9HBF4 777 aa10.76□□□□□ -0.69
NEDD8-204ENST00000526430 PLAC1Q9HBJ0 212 aa10.76□□□□□ -0.69
NEDD8-204ENST00000526430 SLC39A1Q9NY26 324 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms