RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 TUBA1BP68363 451 aa3.83□□□□□ -1.8
CD44-219ENST00000525685 ECT2LQ008S8 904 aa3.83□□□□□ -1.8
CD44-219ENST00000525685 MC1RQ01726 317 aa3.83□□□□□ -1.8
CD44-219ENST00000525685 CHAF1BQ13112 559 aa3.83□□□□□ -1.8
CD44-219ENST00000525685 MAD2L1Q13257 205 aaPredicted RBP3.83□□□□□ -1.8
CD44-219ENST00000525685 TNFAIP1Q13829 316 aa3.83□□□□□ -1.8
CD44-219ENST00000525685 NFATC4Q14934 902 aa3.83□□□□□ -1.8
CD44-219ENST00000525685 WTAPQ15007 396 aa3.83□□□□□ -1.8
CD44-219ENST00000525685 ASIC2Q16515 512 aa3.83□□□□□ -1.8
CD44-219ENST00000525685 ALDH1L2Q3SY69 923 aa3.83□□□□□ -1.8
CD44-219ENST00000525685 CDONQ4KMG0 1287 aa3.83□□□□□ -1.8
CD44-219ENST00000525685 PAPPA-AS1Q5QFB9 102 aa3.83□□□□□ -1.8
CD44-219ENST00000525685 IRAK1BP1Q5VVH5 260 aa3.83□□□□□ -1.8
CD44-219ENST00000525685 ZNF324BQ6AW86 544 aaPredicted RBP3.83□□□□□ -1.8
CD44-219ENST00000525685 NADSYN1Q6IA69 706 aa3.83□□□□□ -1.8
CD44-219ENST00000525685 PLEKHA7Q6IQ23 1121 aa3.83□□□□□ -1.8
CD44-219ENST00000525685 SEPT14Q6ZU15 432 aa3.83□□□□□ -1.8
CD44-219ENST00000525685 HIST3H2AQ7L7L0 130 aa3.83□□□□□ -1.8
CD44-219ENST00000525685 PPP1R42Q7Z4L9 355 aa3.83□□□□□ -1.8
CD44-219ENST00000525685 SDCCAG8Q86SQ7 713 aaPredicted RBP3.83□□□□□ -1.8
CD44-219ENST00000525685 GPR180Q86V85 440 aa3.83□□□□□ -1.8
CD44-219ENST00000525685 RPAP2Q8IXW5 612 aaPredicted RBP3.83□□□□□ -1.8
CD44-219ENST00000525685 PI4KAP1Q8N8J0 262 aa3.83□□□□□ -1.8
CD44-219ENST00000525685 MAGEC3Q8TD91 643 aa3.83□□□□□ -1.8
CD44-219ENST00000525685 DNAAF4Q8WXU2 420 aa3.83□□□□□ -1.8
CD44-219ENST00000525685 APBB2Q92870 758 aa3.83□□□□□ -1.8
CD44-219ENST00000525685 ELMOD3Q96FG2 381 aa3.83□□□□□ -1.8
CD44-219ENST00000525685 ADGRG7Q96K78 797 aa3.83□□□□□ -1.8
CD44-219ENST00000525685 UTP14AQ9BVJ6 771 aaKnown RBP3.83□□□□□ -1.8
CD44-219ENST00000525685 NYXQ9GZU5 481 aa3.83□□□□□ -1.8
CD44-219ENST00000525685 SIL1Q9H173 461 aa3.83□□□□□ -1.8
CD44-219ENST00000525685 C6orf106Q9H6K1 298 aaPredicted RBP3.83□□□□□ -1.8
CD44-219ENST00000525685 MAP3K20Q9NYL2 800 aaKnown RBP3.83□□□□□ -1.8
CD44-219ENST00000525685 STK39Q9UEW8 545 aa3.83□□□□□ -1.8
CD44-219ENST00000525685 ADD3Q9UEY8 706 aaKnown RBP3.83□□□□□ -1.8
CD44-219ENST00000525685 VDAC3Q9Y277 283 aa3.83□□□□□ -1.8
CD44-219ENST00000525685 SH3TC1Q8TE82 1336 aa3.83□□□□□ -1.8
CD44-219ENST00000525685 SNED1Q8TER0 1413 aa3.83□□□□□ -1.8
CD44-219ENST00000525685 TIAM2Q8IVF5 1701 aa3.83□□□□□ -1.8
CD44-219ENST00000525685 SLX4Q8IY92 1834 aa3.83□□□□□ -1.8
CD44-219ENST00000525685 MYH3P11055 1940 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 FER1L6Q2WGJ9 1857 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 SPEF2Q9C093 1822 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 A0A1B0GUL6 1792 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 LTBP1Q14766 1721 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 ABCC4O15439 1325 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 PTPRCP08575 1304 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 CDHR2Q9BYE9 1310 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 A0A1W2PQF6 199 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 FRMD3A2A2Y4 597 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 DENND3A2RUS2 1198 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 EIF4E1BA6NMX2 242 aaKnown RBP3.82□□□□□ -1.8
CD44-219ENST00000525685 B4DLN1 442 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 H0YIN7 160 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 M0QZ24 198 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 ATP2A1O14983 1001 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 GFPT2O94808 682 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 KDM4BO94953 1096 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 ZBTB11O95625 1053 aaPredicted RBP3.82□□□□□ -1.8
CD44-219ENST00000525685 FTCDO95954 541 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 SRPRAP08240 638 aaKnown RBP3.82□□□□□ -1.8
CD44-219ENST00000525685 ACTN1P12814 892 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 DAOP14920 347 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 GCH1P30793 250 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 HADHAP40939 763 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 CAMPP49913 170 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 MRPL12P52815 198 aaKnown RBP3.82□□□□□ -1.8
CD44-219ENST00000525685 ART1P52961 327 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 HNRNPH2P55795 449 aaKnown RBP3.82□□□□□ -1.8
CD44-219ENST00000525685 KRTAP10-7P60409 375 aaPredicted RBP3.82□□□□□ -1.8
CD44-219ENST00000525685 SEC61A1P61619 476 aaKnown RBP3.82□□□□□ -1.8
CD44-219ENST00000525685 MRPS34P82930 218 aaKnown RBP3.82□□□□□ -1.8
CD44-219ENST00000525685 BNC1Q01954 994 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 TRAF3Q13114 568 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 CRY2Q49AN0 593 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 SLC10A5Q5PT55 438 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 LRIF1Q5T3J3 769 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 BEND3Q5T5X7 828 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 FAM205BPQ63HN1 556 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 FASTKD5Q7L8L6 764 aaKnown RBP3.82□□□□□ -1.8
CD44-219ENST00000525685 CCDC190Q86UF4 302 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 SFR1Q86XK3 245 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 RNF168Q8IYW5 571 aaPredicted RBP3.82□□□□□ -1.8
CD44-219ENST00000525685 DCP1BQ8IZD4 617 aaKnown RBP3.82□□□□□ -1.8
CD44-219ENST00000525685 ADGRF2Q8IZF7 708 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 SRBD1Q8N5C6 995 aaKnown RBP3.82□□□□□ -1.8
CD44-219ENST00000525685 TANKQ92844 425 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 JAKMIP2Q96AA8 810 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 SCMH1Q96GD3 660 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 TMEM19Q96HH6 336 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 FAM84BQ96KN1 310 aaPredicted RBP3.82□□□□□ -1.8
CD44-219ENST00000525685 SEPT5Q99719 369 aaPredicted RBP3.82□□□□□ -1.8
CD44-219ENST00000525685 SEMA3CQ99985 751 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 GHITMQ9H3K2 345 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 PLK3Q9H4B4 646 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 PDZD7Q9H5P4 517 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 CWC25Q9NXE8 425 aaPredicted RBP3.82□□□□□ -1.8
CD44-219ENST00000525685 SMARCAL1Q9NZC9 954 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 OGFRQ9NZT2 677 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 COPG2Q9UBF2 871 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms