RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 COL15A1P39059 1388 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 WASH3PC4AMC7 463 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 H3BSH0 61 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 SLC25A14O95258 325 aaPredicted RBP13.54□□□□□ -0.24
LRRK1-202ENST00000525284 EIF4BP23588 611 aaKnown RBP13.54□□□□□ -0.24
LRRK1-202ENST00000525284 FMO3P31513 532 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 OR12D2P58182 307 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 UGT8Q16880 541 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 ZNF550Q7Z398 422 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 GALNT12Q8IXK2 581 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 GAL3ST4Q96RP7 486 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 STRA6Q9BX79 667 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 DPAGT1Q9H3H5 408 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 PDE2AO00408 941 aaPredicted RBP13.54□□□□□ -0.24
LRRK1-202ENST00000525284 TBL1XO60907 577 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 ACVR2AP27037 513 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 CHKAP35790 457 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 SLC6A9P48067 706 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 PSMA6P60900 246 aaKnown RBP13.54□□□□□ -0.24
LRRK1-202ENST00000525284 ZC3H12AQ5D1E8 599 aaKnown RBP13.54□□□□□ -0.24
LRRK1-202ENST00000525284 SLC8B1Q6J4K2 584 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 SP8Q8IXZ3 490 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 BARD1Q99728 777 aaKnown RBP13.54□□□□□ -0.24
LRRK1-202ENST00000525284 EIF5A2Q9GZV4 153 aaKnown RBP13.54□□□□□ -0.24
LRRK1-202ENST00000525284 ERVK-11Q9UQG0 969 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 KCNU1A8MYU2 1149 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 HERC3Q15034 1050 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 HSD17B12Q53GQ0 312 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 SERPINA13PQ6UXR4 307 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 FAM35AQ86V20 835 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 ZNF280BQ86YH2 543 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 GPR135Q8IZ08 494 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 HELQQ8TDG4 1101 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 SMARCD2Q92925 531 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 CNDP2Q96KP4 475 aaKnown RBP13.53□□□□□ -0.24
LRRK1-202ENST00000525284 ELOVL4Q9GZR5 314 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 PCDH18Q9HCL0 1135 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 ANTXR2P58335 489 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 SLC20A2Q08357 652 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 SNX29P2Q8IUI4 249 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 ZNF611Q8N823 705 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 PNLDC1Q8NA58 520 aaKnown RBP13.53□□□□□ -0.24
LRRK1-202ENST00000525284 SNIP1Q8TAD8 396 aaKnown RBP13.53□□□□□ -0.24
LRRK1-202ENST00000525284 PWWP2AQ96N64 755 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 BEX2Q9BXY8 128 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 POLR2J2Q9GZM3 115 aaKnown RBP13.53□□□□□ -0.24
LRRK1-202ENST00000525284 BEX1Q9HBH7 125 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 ABCC13Q9NSE7 274 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 SETD4Q9NVD3 440 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 SPIN1Q9Y657 262 aaPredicted RBP13.53□□□□□ -0.24
LRRK1-202ENST00000525284 C1QTNF3-AMACRE9PGA6 284 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 PLATP00750 562 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 MC4RP32245 332 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 GRK6P43250 576 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 MAB21L1Q13394 359 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 MAD2L1BPQ15013 274 aaPredicted RBP13.53□□□□□ -0.24
LRRK1-202ENST00000525284 PON2Q15165 354 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 KRBOX4Q5JUW0 171 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 C17orf64Q86WR6 236 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 BSNDQ8WZ55 320 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 MFSD3Q96ES6 412 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 LRTM1Q9HBL6 345 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 KANSL3Q9P2N6 904 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 KCNN3Q9UGI6 736 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 BTG3Q14201 252 aaPredicted RBP13.53□□□□□ -0.24
LRRK1-202ENST00000525284 CRTC1Q6UUV9 634 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 FAM129CQ86XR2 697 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 CCDC28AQ8IWP9 274 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 ZNF676Q8N7Q3 588 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 OR5T2Q8NGG2 359 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 CASTOR1Q8WTX7 329 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 METTL21AQ8WXB1 218 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 OR5B12Q96R08 314 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 SEMA3CQ99985 751 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 TLR10Q9BXR5 811 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 TMEM39BQ9GZU3 492 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 PCDHB9Q9Y5E1 797 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 NLRP1Q9C000 1473 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 SLC16A8O95907 504 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 DDX6P26196 483 aaKnown RBP eCLIP13.53□□□□□ -0.24
LRRK1-202ENST00000525284 KIR3DL1P43629 444 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 BTBD16Q32M84 506 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 OVCA2Q8WZ82 227 aa13.53□□□□□ -0.24
LRRK1-202ENST00000525284 GTPBP2Q9BX10 602 aaKnown RBP13.53□□□□□ -0.24
LRRK1-202ENST00000525284 DISC1C4P0D8 188 aa13.52□□□□□ -0.24
LRRK1-202ENST00000525284 ABLIM1O14639 778 aa13.52□□□□□ -0.24
LRRK1-202ENST00000525284 FGF10O15520 208 aaPredicted RBP13.52□□□□□ -0.24
LRRK1-202ENST00000525284 GPD2P43304 727 aa13.52□□□□□ -0.24
LRRK1-202ENST00000525284 LRRC37A5PQ49AS3 106 aa13.52□□□□□ -0.24
LRRK1-202ENST00000525284 ZNF517Q6ZMY9 492 aaPredicted RBP13.52□□□□□ -0.24
LRRK1-202ENST00000525284 FBXO33Q7Z6M2 555 aa13.52□□□□□ -0.24
LRRK1-202ENST00000525284 DNAJB3Q8WWF6 145 aa13.52□□□□□ -0.24
LRRK1-202ENST00000525284 TSNAXQ99598 290 aaKnown RBP13.52□□□□□ -0.24
LRRK1-202ENST00000525284 LYARQ9NX58 379 aaKnown RBP13.52□□□□□ -0.24
LRRK1-202ENST00000525284 TBC1D14Q9P2M4 693 aa13.52□□□□□ -0.24
LRRK1-202ENST00000525284 IQCF5A8MTL0 148 aa13.52□□□□□ -0.24
LRRK1-202ENST00000525284 A8MV72 311 aaPredicted RBP13.52□□□□□ -0.24
LRRK1-202ENST00000525284 BCAS1O75363 584 aaPredicted RBP13.52□□□□□ -0.24
LRRK1-202ENST00000525284 CELF2O95319 508 aaKnown RBP13.52□□□□□ -0.24
LRRK1-202ENST00000525284 RGS6P49758 472 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms