RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	MINDY1	Q8N5J2	469 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	CCNYL1	Q8N7R7	359 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	SMYD1	Q8NB12	490 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	ZNF420	Q8TAQ5	688 aa	Predicted RBP	7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	SMARCD2	Q92925	531 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	7.75	□□□□□ -1.17	2e-7	■■■■■ 62.8
SPIDR-223	ENST00000524033	C12orf43	Q96C57	262 aa	Known RBP	7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	UBXN10	Q96LJ8	280 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	MYRFL	Q96LU7	910 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	ZSWIM3	Q96MP5	696 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	CITED4	Q96RK1	184 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	CIB1	Q99828	191 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	OMD	Q99983	421 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	TMEM79	Q9BSE2	394 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	EFHD1	Q9BUP0	239 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	FICD	Q9BVA6	458 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	TRMT61B	Q9BVS5	477 aa	Known RBP	7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	NPL	Q9BXD5	320 aa	Predicted RBP	7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	YTHDF1	Q9BYJ9	559 aa	Known RBP	7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	SEMA6A	Q9H2E6	1030 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	ARNT2	Q9HBZ2	717 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	EML4	Q9HC35	981 aa	Known RBP	7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	ZFP14	Q9HCL3	533 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	ASAH2	Q9NR71	780 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	TMEM30A	Q9NV96	361 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	SMOX	Q9NWM0	555 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	ARHGEF38	Q9NXL2	777 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	GTSE1	Q9NYZ3	720 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	TMEM9	Q9P0T7	183 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	SLC2A6	Q9UGQ3	507 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	ZNF639	Q9UID6	485 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	AAR2	Q9Y312	384 aa	Known RBP	7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	PCDHGC4	Q9Y5F7	938 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033		R4GN57	208 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	SYNJ2BP-COX16	A0A087WUM0	186 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	WASH4P	A8MWX3	477 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	AURKA	O14965	403 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	MAFK	O60675	156 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	HUS1	O60921	280 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	TIPRL	O75663	272 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	RASAL1	O95294	804 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	MATN4	O95460	622 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	CPNE6	O95741	557 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	F9	P00740	461 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	HLA-DQB2	P05538	268 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	OR4Q2	P0C623	313 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	PRR35	P0CG20	571 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	SP9	P0CG40	484 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	ODC1	P11926	461 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	HNRNPL	P14866	589 aa	Known RBP eCLIP	7.74	□□□□□ -1.17	1e-8	■■■■■ 28.9
SPIDR-223	ENST00000524033	JUNB	P17275	347 aa	Predicted RBP	7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	CKMT2	P17540	419 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	TYMP	P19971	482 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	TCN1	P20061	433 aa	Predicted RBP	7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	CAPN3	P20807	821 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	TTK	P33981	857 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	VIPR2	P41587	438 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	MAGEA8	P43361	318 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	CD97	P48960	835 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	ENTPD1	P49961	510 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	CCT8	P50990	548 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	SUOX	P51687	545 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	EPHB3	P54753	998 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	NRG1	Q02297	640 aa	Predicted RBP	7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	TNK2	Q07912	1038 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	GRSF1	Q12849	480 aa	Known RBP eCLIP	7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	GPR17	Q13304	367 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	CTBP1	Q13363	440 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	ACAP2	Q15057	778 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	ARL13B	Q3SXY8	428 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	ZNF678	Q5SXM1	525 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	AGAP9	Q5VTM2	703 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	WSCD1	Q658N2	575 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	KRT80	Q6KB66	452 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	ZC3H14	Q6PJT7	736 aa	Known RBP	7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	RANBP10	Q6VN20	620 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	ARHGAP36	Q6ZRI8	547 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	ZBTB49	Q6ZSB9	765 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	GPR141	Q7Z602	305 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	DHFR2	Q86XF0	187 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	ZNF354C	Q86Y25	554 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	PTRH1	Q86Y79	214 aa	Known RBP	7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	SLC15A3	Q8IY34	581 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	TRIML2	Q8N7C3	387 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	TERB1	Q8NA31	727 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	FAM47B	Q8NA70	645 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	LEMD2	Q8NC56	503 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	SPATA22	Q8NHS9	363 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	TSPEAR	Q8WU66	669 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	CANT1	Q8WVQ1	401 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	FATE1	Q969F0	183 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	GTPBP3	Q969Y2	492 aa	Known RBP	7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	TADA1	Q96BN2	335 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	SGF29	Q96ES7	293 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	SENP8	Q96LD8	212 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	ASB16	Q96NS5	453 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	ADI1	Q9BV57	179 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	TRIM15	Q9C019	465 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	RPF2	Q9H7B2	306 aa	Known RBP	7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	CAAP1	Q9H8G2	361 aa		7.74	□□□□□ -1.17

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