RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 SLC25A45Q8N413 288 aa11.74□□□□□ -0.53
PVT1-215ENST00000522963 BEND7Q8N7W2 519 aaPredicted RBP11.74□□□□□ -0.53
PVT1-215ENST00000522963 GPATCH11Q8N954 259 aa11.74□□□□□ -0.53
PVT1-215ENST00000522963 ACVR1CQ8NER5 493 aa11.74□□□□□ -0.53
PVT1-215ENST00000522963 LKAAEAR1Q8TD35 194 aa11.74□□□□□ -0.53
PVT1-215ENST00000522963 EPS8L3Q8TE67 593 aaKnown RBP11.74□□□□□ -0.53
PVT1-215ENST00000522963 SCARF2Q96GP6 870 aaPredicted RBP11.74□□□□□ -0.53
PVT1-215ENST00000522963 VPS39Q96JC1 886 aa11.74□□□□□ -0.53
PVT1-215ENST00000522963 CNDP2Q96KP4 475 aaKnown RBP11.74□□□□□ -0.53
PVT1-215ENST00000522963 ZIM3Q96PE6 472 aa11.74□□□□□ -0.53
PVT1-215ENST00000522963 NDNQ99608 321 aa11.74□□□□□ -0.53
PVT1-215ENST00000522963 CDC6Q99741 560 aa11.74□□□□□ -0.53
PVT1-215ENST00000522963 AARSD1Q9BTE6 412 aaKnown RBP11.74□□□□□ -0.53
PVT1-215ENST00000522963 SPASTQ9UBP0 616 aa11.74□□□□□ -0.53
PVT1-215ENST00000522963 SLC24A2Q9UI40 661 aa11.74□□□□□ -0.53
PVT1-215ENST00000522963 GNPTGQ9UJJ9 305 aa11.74□□□□□ -0.53
PVT1-215ENST00000522963 ZNF180Q9UJW8 692 aa11.74□□□□□ -0.53
PVT1-215ENST00000522963 SUFUQ9UMX1 484 aa11.74□□□□□ -0.53
PVT1-215ENST00000522963 DOLKQ9UPQ8 538 aa11.74□□□□□ -0.53
PVT1-215ENST00000522963 MTO1Q9Y2Z2 717 aaKnown RBP11.74□□□□□ -0.53
PVT1-215ENST00000522963 PRKAB1Q9Y478 270 aa11.74□□□□□ -0.53
PVT1-215ENST00000522963 PCDHB1Q9Y5F3 818 aa11.74□□□□□ -0.53
PVT1-215ENST00000522963 FAM95CA0A1B0GW59 222 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 PRSS38A1L453 326 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 HMX2A2RU54 273 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 NEMP2A6NFY4 417 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 SMIM23A6NLE4 172 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 GPR89AB7ZAQ6 455 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 TRIM38O00635 465 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 AQP9O43315 295 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 GRID2O43424 1007 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 CBFA2T3O75081 653 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 NIPSNAP2O75323 286 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 RASGRP1O95267 797 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 TNFP01375 233 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 ESR1P03372 595 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 ITGA2BP08514 1039 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 OR56A5P0C7T3 313 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 GPR89BP0CG08 455 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 ITGB6P18564 788 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 PRLHRP49683 370 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 SRP54P61011 504 aaKnown RBP11.73□□□□□ -0.53
PVT1-215ENST00000522963 DAB2P98082 770 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 TIAL1Q01085 375 aaKnown RBP eCLIP11.73□□□□□ -0.532e-6■■■■□ 22.9
PVT1-215ENST00000522963 ZNF844Q08AG5 666 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 DNAJC3Q13217 504 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 BMPR2Q13873 1038 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 DEFB133Q30KQ1 61 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 HECTD2Q5U5R9 776 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 PTRHD1Q6GMV3 140 aaKnown RBP11.73□□□□□ -0.53
PVT1-215ENST00000522963 LRIG3Q6UXM1 1119 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 DBX2Q6ZNG2 339 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 TDRPQ86YL5 185 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 TRAPPC5Q8IUR0 188 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 SPNS2Q8IVW8 549 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 KRT222Q8N1A0 295 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 ZNF548Q8NEK5 533 aaPredicted RBP11.73□□□□□ -0.53
PVT1-215ENST00000522963 ZBTB9Q96C00 473 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 PDXPQ96GD0 296 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 ELMO2Q96JJ3 720 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 GPR22Q99680 433 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 TMEM109Q9BVC6 243 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 RMI1Q9H9A7 625 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 CARS2Q9HA77 564 aaKnown RBP11.73□□□□□ -0.53
PVT1-215ENST00000522963 PPCSQ9HAB8 311 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 CYP4F12Q9HCS2 524 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 EURLQ9NYK6 297 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 PSMC3IPQ9P2W1 217 aaPredicted RBP11.73□□□□□ -0.53
PVT1-215ENST00000522963 CTNNAL1Q9UBT7 734 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 ZNHIT2Q9UHR6 403 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 CORO1CQ9ULV4 474 aaPredicted RBP11.73□□□□□ -0.53
PVT1-215ENST00000522963 GPR34Q9UPC5 381 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 MED16Q9Y2X0 877 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 IKBKGQ9Y6K9 419 aa11.73□□□□□ -0.53
PVT1-215ENST00000522963 TLDC2A0PJX2 215 aa11.72□□□□□ -0.53
PVT1-215ENST00000522963 H3BMM5 538 aa11.72□□□□□ -0.53
PVT1-215ENST00000522963 QSOX1O00391 747 aa11.72□□□□□ -0.53
PVT1-215ENST00000522963 RASGRF2O14827 1237 aa11.72□□□□□ -0.53
PVT1-215ENST00000522963 TNFSF14O43557 240 aa11.72□□□□□ -0.53
PVT1-215ENST00000522963 SIGLEC6O43699 453 aa11.72□□□□□ -0.53
PVT1-215ENST00000522963 POP7O75817 140 aaKnown RBP11.72□□□□□ -0.53
PVT1-215ENST00000522963 ANXA6P08133 673 aa11.72□□□□□ -0.53
PVT1-215ENST00000522963 FTH1P19P0C7X4 201 aa11.72□□□□□ -0.53
PVT1-215ENST00000522963 ALPPL2P10696 532 aa11.72□□□□□ -0.53
PVT1-215ENST00000522963 MYF5P13349 255 aa11.72□□□□□ -0.53
PVT1-215ENST00000522963 GNPDA1P46926 289 aa11.72□□□□□ -0.53
PVT1-215ENST00000522963 SERPINB9P50453 376 aa11.72□□□□□ -0.53
PVT1-215ENST00000522963 BLKP51451 505 aa11.72□□□□□ -0.53
PVT1-215ENST00000522963 HK3P52790 923 aa11.72□□□□□ -0.53
PVT1-215ENST00000522963 PGGT1BP53609 377 aa11.72□□□□□ -0.53
PVT1-215ENST00000522963 CDKN2DP55273 166 aa11.72□□□□□ -0.53
PVT1-215ENST00000522963 ILF2Q12905 390 aaKnown RBP11.72□□□□□ -0.53
PVT1-215ENST00000522963 PLA2G4EQ3MJ16 856 aa11.72□□□□□ -0.53
PVT1-215ENST00000522963 PYCR3Q53H96 274 aa11.72□□□□□ -0.53
PVT1-215ENST00000522963 MROH9Q5TGP6 573 aa11.72□□□□□ -0.53
PVT1-215ENST00000522963 FAM45BPQ6NSW5 357 aa11.72□□□□□ -0.53
PVT1-215ENST00000522963 HDXQ7Z353 690 aa11.72□□□□□ -0.53
PVT1-215ENST00000522963 KANSL1Q7Z3B3 1105 aa11.72□□□□□ -0.53
PVT1-215ENST00000522963 C11orf96Q7Z7L8 435 aa11.72□□□□□ -0.53
PVT1-215ENST00000522963 LRRTM4Q86VH4 590 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms