RNA–Protein interactions for RNA: ENST00000522841.6

SMG1P3-206, Transcript of SMG1 pseudogene 3, humanhuman

TSL 2 BASIC

Gene SMG1P3, Length 2,774 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P3-206ENST00000522841 LHX3Q9UBR4 397 aa16.09■□□□□ 0.17
SMG1P3-206ENST00000522841 ZMYM5Q9UJ78 669 aa16.09■□□□□ 0.17
SMG1P3-206ENST00000522841 EEDO75530 441 aaKnown RBP16.09■□□□□ 0.17
SMG1P3-206ENST00000522841 MBL2P11226 248 aaPredicted RBP16.09■□□□□ 0.17
SMG1P3-206ENST00000522841 PSMA3P25788 255 aa16.09■□□□□ 0.17
SMG1P3-206ENST00000522841 PIK3CGP48736 1102 aa16.09■□□□□ 0.17
SMG1P3-206ENST00000522841 PSMD7P51665 324 aa16.09■□□□□ 0.17
SMG1P3-206ENST00000522841 KCTD21Q4G0X4 260 aa16.09■□□□□ 0.17
SMG1P3-206ENST00000522841 SLC8B1Q6J4K2 584 aa16.09■□□□□ 0.17
SMG1P3-206ENST00000522841 TMCO2Q7Z6W1 182 aaPredicted RBP16.09■□□□□ 0.17
SMG1P3-206ENST00000522841 CAMK1DQ8IU85 385 aa16.09■□□□□ 0.17
SMG1P3-206ENST00000522841 FIBCD1Q8N539 461 aa16.09■□□□□ 0.17
SMG1P3-206ENST00000522841 CLDN19Q8N6F1 224 aa16.09■□□□□ 0.17
SMG1P3-206ENST00000522841 KCNJ9Q92806 393 aa16.09■□□□□ 0.17
SMG1P3-206ENST00000522841 TRIM54Q9BYV2 358 aa16.09■□□□□ 0.17
SMG1P3-206ENST00000522841 SOX17Q9H6I2 414 aaPredicted RBP16.09■□□□□ 0.17
SMG1P3-206ENST00000522841 PNPLA3Q9NST1 481 aa16.09■□□□□ 0.17
SMG1P3-206ENST00000522841 DOLKQ9UPQ8 538 aa16.09■□□□□ 0.17
SMG1P3-206ENST00000522841 DMTF1Q9Y222 760 aa16.09■□□□□ 0.17
SMG1P3-206ENST00000522841 ZNF24P17028 368 aa16.09■□□□□ 0.17
SMG1P3-206ENST00000522841 CD97P48960 835 aa16.09■□□□□ 0.17
SMG1P3-206ENST00000522841 DGKQP52824 942 aa16.09■□□□□ 0.17
SMG1P3-206ENST00000522841 OR4D2P58180 307 aa16.09■□□□□ 0.17
SMG1P3-206ENST00000522841 ATP6AP1LQ52LC2 224 aa16.09■□□□□ 0.17
SMG1P3-206ENST00000522841 TRPV3Q8NET8 790 aa16.09■□□□□ 0.17
SMG1P3-206ENST00000522841 FNDC8Q8TC99 324 aa16.09■□□□□ 0.17
SMG1P3-206ENST00000522841 PPM1MQ96MI6 270 aa16.09■□□□□ 0.17
SMG1P3-206ENST00000522841 BRINP2Q9C0B6 783 aa16.09■□□□□ 0.17
SMG1P3-206ENST00000522841 IL17CQ9P0M4 197 aa16.09■□□□□ 0.17
SMG1P3-206ENST00000522841 VPS9D1Q9Y2B5 631 aa16.09■□□□□ 0.17
SMG1P3-206ENST00000522841 TRMUO75648 421 aaKnown RBP16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 G6PDP11413 515 aa16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 SELPLGQ14242 412 aa16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 FRA10AC1Q70Z53 315 aa16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 ZNF786Q8N393 782 aa16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 PDZD8Q8NEN9 1154 aa16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 LKAAEAR1Q8TD35 194 aa16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 AUTS2Q8WXX7 1259 aa16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 FBXL20Q96IG2 436 aa16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 KLF16Q9BXK1 252 aaPredicted RBP16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 RPF2Q9H7B2 306 aaKnown RBP16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 SUN2Q9UH99 717 aa16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 LEF1Q9UJU2 399 aaPredicted RBP16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 SLC30A1Q9Y6M5 507 aa16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 PIKFYVEQ9Y2I7 2098 aa16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 PLXNA4Q9HCM2 1894 aa16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 TCRBV5S2A0A599 114 aa16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 ACOX3O15254 700 aa16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 RSL1D1O76021 490 aaKnown RBP16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 CSKP41240 450 aa16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 GDF5P43026 501 aa16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 PTGER3P43115 390 aa16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 CCT8P50990 548 aa16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 CLCN4P51793 760 aa16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 SMAD3P84022 425 aaKnown RBP16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 BFSP2Q13515 415 aa16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 COQ5Q5HYK3 327 aa16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 FAM117BQ6P1L5 589 aa16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 CHST9Q7L1S5 443 aa16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 GOLGA7Q7Z5G4 137 aa16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 FAM126BQ8IXS8 530 aa16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 SMYD1Q8NB12 490 aa16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 OR4F6Q8NGB9 312 aa16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 CYGBQ8WWM9 190 aa16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 CENPNQ96H22 339 aaPredicted RBP16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 CORO1BQ9BR76 489 aa16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 TSEN34Q9BSV6 310 aaKnown RBP16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 ADI1Q9BV57 179 aa16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 CIPCQ9C0C6 399 aa16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 P2RY12Q9H244 342 aa16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 NSUN3Q9H649 340 aaKnown RBP16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 HMX1Q9NP08 348 aaPredicted RBP16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 PADI4Q9UM07 663 aa16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 PKP3Q9Y446 797 aa16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 PRSS21Q9Y6M0 314 aa16.08■□□□□ 0.16
SMG1P3-206ENST00000522841 OR7A17O14581 309 aa16.07■□□□□ 0.16
SMG1P3-206ENST00000522841 EI24O14681 340 aa16.07■□□□□ 0.16
SMG1P3-206ENST00000522841 PFDN6O15212 129 aa16.07■□□□□ 0.16
SMG1P3-206ENST00000522841 ESR1P03372 595 aa16.07■□□□□ 0.16
SMG1P3-206ENST00000522841 ZNF23P17027 643 aa16.07■□□□□ 0.16
SMG1P3-206ENST00000522841 CDH2P19022 906 aaPredicted RBP16.07■□□□□ 0.16
SMG1P3-206ENST00000522841 HSPA7P48741 367 aa16.07■□□□□ 0.16
SMG1P3-206ENST00000522841 FOXM1Q08050 763 aa16.07■□□□□ 0.16
SMG1P3-206ENST00000522841 ABRAXAS2Q15018 415 aa16.07■□□□□ 0.16
SMG1P3-206ENST00000522841 ZNF382Q96SR6 550 aa16.07■□□□□ 0.16
SMG1P3-206ENST00000522841 FEM1AQ9BSK4 669 aa16.07■□□□□ 0.16
SMG1P3-206ENST00000522841 MRPL9Q9BYD2 267 aaKnown RBP16.07■□□□□ 0.16
SMG1P3-206ENST00000522841 TIMMDC1Q9NPL8 285 aa16.07■□□□□ 0.16
SMG1P3-206ENST00000522841 RIC8BQ9NVN3 520 aa16.07■□□□□ 0.16
SMG1P3-206ENST00000522841 VPS51Q9UID3 782 aa16.07■□□□□ 0.16
SMG1P3-206ENST00000522841 YIPF1Q9Y548 306 aa16.07■□□□□ 0.16
SMG1P3-206ENST00000522841 ANAPC1Q9H1A4 1944 aa16.07■□□□□ 0.16
SMG1P3-206ENST00000522841 SMAD6O43541 496 aaKnown RBP16.07■□□□□ 0.16
SMG1P3-206ENST00000522841 FOXD2O60548 495 aaPredicted RBP16.07■□□□□ 0.16
SMG1P3-206ENST00000522841 UGT1A1P22309 533 aa16.07■□□□□ 0.16
SMG1P3-206ENST00000522841 UGT1A4P22310 534 aa16.07■□□□□ 0.16
SMG1P3-206ENST00000522841 HRH2P25021 359 aa16.07■□□□□ 0.16
SMG1P3-206ENST00000522841 UGT1A3P35503 534 aa16.07■□□□□ 0.16
SMG1P3-206ENST00000522841 UGT1A5P35504 534 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms