RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 ZNF30P17039 623 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 BMP7P18075 431 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 NR1D1P20393 614 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 GNLYP22749 145 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 EEF1GP26641 437 aaKnown RBP6.16□□□□□ -1.42
PABPC1-220ENST00000522658 TEAD1P28347 426 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 RGRP47804 291 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 PMS2P54278 862 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 GSCP56915 257 aaPredicted RBP6.16□□□□□ -1.42
PABPC1-220ENST00000522658 FMO1Q01740 532 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 NSUN2Q08J23 767 aaKnown RBP eCLIP6.16□□□□□ -1.42
PABPC1-220ENST00000522658 SSPNQ14714 243 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 KIR2DS5Q14953 304 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 INSCQ1MX18 579 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 CLEC16AQ2KHT3 1053 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 RAB6CQ53S08 254 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 ERMARDQ5T6L9 678 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 ATP1A1-AS1Q5TC04 95 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 WDR59Q6PJI9 974 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 TMCO3Q6UWJ1 677 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 RFX8Q6ZV50 586 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 CHST15Q7LFX5 561 aaPredicted RBP6.16□□□□□ -1.42
PABPC1-220ENST00000522658 NRROSQ86YC3 692 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 ENOX1Q8TC92 643 aaKnown RBP6.16□□□□□ -1.42
PABPC1-220ENST00000522658 CCHCR1Q8TD31 782 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 CENPIQ92674 756 aaPredicted RBP6.16□□□□□ -1.42
PABPC1-220ENST00000522658 RELTQ969Z4 430 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 ECHDC3Q96DC8 303 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 ELMO2Q96JJ3 720 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 COQ10AQ96MF6 247 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 ZNF599Q96NL3 588 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 TGM7Q96PF1 710 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 SLC25A23Q9BV35 468 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 SLC39A8Q9C0K1 460 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 RAB6CQ9H0N0 254 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 NOL6Q9H6R4 1146 aaKnown RBP6.16□□□□□ -1.42
PABPC1-220ENST00000522658 LRRC19Q9H756 370 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 PDFQ9HBH1 243 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 PDE7BQ9NP56 450 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 SLAMF7Q9NQ25 335 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 ACSS2Q9NR19 701 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 FBXO8Q9NRD0 319 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 GPATCH2LQ9NWQ4 482 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 TAB2Q9NYJ8 693 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 PKD2L2Q9NZM6 624 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 RCOR3Q9P2K3 495 aaPredicted RBP6.16□□□□□ -1.42
PABPC1-220ENST00000522658 CD84Q9UIB8 345 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 SLC17A4Q9Y2C5 497 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 TMEM184BQ9Y519 407 aaPredicted RBP6.16□□□□□ -1.42
PABPC1-220ENST00000522658 MRPS18BQ9Y676 258 aaKnown RBP6.16□□□□□ -1.42
PABPC1-220ENST00000522658 AHCTF1Q8WYP5 2266 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 PTPN13Q12923 2485 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 SDK2Q58EX2 2172 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 UBR5O95071 2799 aaPredicted RBP6.15□□□□□ -1.42
PABPC1-220ENST00000522658 LILRA5A6NI73 299 aa6.15□□□□□ -1.42
PABPC1-220ENST00000522658 HRKO00198 91 aa6.15□□□□□ -1.42
PABPC1-220ENST00000522658 DDAH2O95865 285 aa6.15□□□□□ -1.42
PABPC1-220ENST00000522658 CTPS1P17812 591 aa6.15□□□□□ -1.42
PABPC1-220ENST00000522658 ERCC2P18074 760 aa6.15□□□□□ -1.42
PABPC1-220ENST00000522658 VCLP18206 1134 aa6.15□□□□□ -1.42
PABPC1-220ENST00000522658 GARSP41250 739 aaKnown RBP6.15□□□□□ -1.42
PABPC1-220ENST00000522658 TNNT3P45378 269 aaPredicted RBP6.15□□□□□ -1.42
PABPC1-220ENST00000522658 MMP13P45452 471 aa6.15□□□□□ -1.42
PABPC1-220ENST00000522658 UQCRFS1P47985 274 aa6.15□□□□□ -1.42
PABPC1-220ENST00000522658 POLD2P49005 469 aa6.15□□□□□ -1.42
PABPC1-220ENST00000522658 SEPHS1P49903 392 aa6.15□□□□□ -1.42
PABPC1-220ENST00000522658 UBE2HP62256 183 aa6.15□□□□□ -1.42
PABPC1-220ENST00000522658 RPS15P62841 145 aaKnown RBP6.15□□□□□ -1.42
PABPC1-220ENST00000522658 SQSTM1Q13501 440 aa6.15□□□□□ -1.42
PABPC1-220ENST00000522658 DNASE1L3Q13609 305 aa6.15□□□□□ -1.42
PABPC1-220ENST00000522658 ZNF385BQ569K4 471 aa6.15□□□□□ -1.42
PABPC1-220ENST00000522658 TDRD12Q587J7 1177 aaKnown RBP6.15□□□□□ -1.42
PABPC1-220ENST00000522658 TCP11X2Q5H9J9 407 aa6.15□□□□□ -1.42
PABPC1-220ENST00000522658 ZNF569Q5MCW4 686 aa6.15□□□□□ -1.42
PABPC1-220ENST00000522658 MARC1Q5VT66 337 aa6.15□□□□□ -1.42
PABPC1-220ENST00000522658 LRRC66Q68CR7 880 aa6.15□□□□□ -1.42
PABPC1-220ENST00000522658 Q6ZVL8 140 aa6.15□□□□□ -1.42
PABPC1-220ENST00000522658 HSD11B1LQ7Z5J1 315 aa6.15□□□□□ -1.42
PABPC1-220ENST00000522658 TRIM74Q86UV6 250 aa6.15□□□□□ -1.42
PABPC1-220ENST00000522658 C17orf82Q86X59 251 aaPredicted RBP6.15□□□□□ -1.42
PABPC1-220ENST00000522658 PPP1R3BQ86XI6 285 aa6.15□□□□□ -1.42
PABPC1-220ENST00000522658 PHF13Q86YI8 300 aaPredicted RBP6.15□□□□□ -1.42
PABPC1-220ENST00000522658 SFRP1Q8N474 314 aa6.15□□□□□ -1.42
PABPC1-220ENST00000522658 SIDT2Q8NBJ9 832 aaKnown RBP6.15□□□□□ -1.42
PABPC1-220ENST00000522658 EXD1Q8NHP7 514 aa6.15□□□□□ -1.42
PABPC1-220ENST00000522658 FNIP1Q8TF40 1166 aa6.15□□□□□ -1.42
PABPC1-220ENST00000522658 CXorf40BQ96DE9 158 aa6.15□□□□□ -1.42
PABPC1-220ENST00000522658 MOCOSQ96EN8 888 aa6.15□□□□□ -1.42
PABPC1-220ENST00000522658 PSKH2Q96QS6 385 aa6.15□□□□□ -1.42
PABPC1-220ENST00000522658 OR6C1Q96RD1 312 aa6.15□□□□□ -1.42
PABPC1-220ENST00000522658 NUDCD1Q96RS6 583 aa6.15□□□□□ -1.42
PABPC1-220ENST00000522658 SNRNP25Q9BV90 132 aaKnown RBP6.15□□□□□ -1.42
PABPC1-220ENST00000522658 SLC7A5P2Q9GIP4 190 aa6.15□□□□□ -1.42
PABPC1-220ENST00000522658 FANCEQ9HB96 536 aa6.15□□□□□ -1.42
PABPC1-220ENST00000522658 APMAPQ9HDC9 416 aa6.15□□□□□ -1.42
PABPC1-220ENST00000522658 CASS4Q9NQ75 786 aa6.15□□□□□ -1.42
PABPC1-220ENST00000522658 PARVAQ9NVD7 372 aa6.15□□□□□ -1.42
PABPC1-220ENST00000522658 VPS18Q9P253 973 aa6.15□□□□□ -1.42
PABPC1-220ENST00000522658 PCSK1NQ9UHG2 260 aa6.15□□□□□ -1.42
PABPC1-220ENST00000522658 NOCTQ9UK39 431 aaKnown RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms