RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 TDRD12Q587J7 1177 aaKnown RBP4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 EFHC1Q5JVL4 640 aa4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 MPP7Q5T2T1 576 aa4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 DNAJB7Q7Z6W7 309 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 OR8H3Q8N146 312 aa4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 CLIP4Q8N3C7 705 aa4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 FBXO39Q8N4B4 442 aa4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 ZNF114Q8NC26 417 aa4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 GOT1L1Q8NHS2 421 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 HMGCLL1Q8TB92 370 aa4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 DEPDC1BQ8WUY9 529 aa4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 SLC44A1Q8WWI5 657 aa4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 MR1Q95460 341 aa4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 CTAGE1Q96RT6 745 aa4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 KRTAP2-2Q9BYT5 123 aa4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 RAD21L1Q9H4I0 556 aa4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 TMEM30AQ9NV96 361 aa4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 KLHL9Q9P2J3 617 aa4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 DNAJB9Q9UBS3 223 aa4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 ANAPC5Q9UJX4 755 aa4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 FBXL2Q9UKC9 423 aa4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 GTF3C4Q9UKN8 822 aa4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 MYO6Q9UM54 1294 aa4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 PROCRQ9UNN8 238 aa4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 ZFP37Q9Y6Q3 630 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 PTPRCP08575 1304 aa4.53□□□□□ -1.68
HMGB1P1-201ENST00000522557 CNTNAP2Q9UHC6 1331 aa4.53□□□□□ -1.68
HMGB1P1-201ENST00000522557 C5orf60A6NFR6 353 aa4.53□□□□□ -1.68
HMGB1P1-201ENST00000522557 OR6C75A6NL08 312 aa4.53□□□□□ -1.68
HMGB1P1-201ENST00000522557 TMEM189-UBE2V1I3L0A0 370 aa4.53□□□□□ -1.68
HMGB1P1-201ENST00000522557 CLIC2O15247 247 aa4.53□□□□□ -1.68
HMGB1P1-201ENST00000522557 MED24O75448 989 aa4.53□□□□□ -1.68
HMGB1P1-201ENST00000522557 LINC00271P0C7V0 271 aa4.53□□□□□ -1.68
HMGB1P1-201ENST00000522557 SSTR2P30874 369 aa4.53□□□□□ -1.68
HMGB1P1-201ENST00000522557 TLX1P31314 330 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P1-201ENST00000522557 CTSCP53634 463 aa4.53□□□□□ -1.68
HMGB1P1-201ENST00000522557 UBE2V1Q13404 147 aa4.53□□□□□ -1.68
HMGB1P1-201ENST00000522557 TUBB2AQ13885 445 aa4.53□□□□□ -1.68
HMGB1P1-201ENST00000522557 TYSND1Q2T9J0 566 aa4.53□□□□□ -1.68
HMGB1P1-201ENST00000522557 LETM2Q2VYF4 491 aa4.53□□□□□ -1.68
HMGB1P1-201ENST00000522557 ZRANB3Q5FWF4 1079 aa4.53□□□□□ -1.68
HMGB1P1-201ENST00000522557 KCNT1Q5JUK3 1230 aa4.53□□□□□ -1.68
HMGB1P1-201ENST00000522557 RNASEH2BQ5TBB1 312 aaKnown RBP4.53□□□□□ -1.68
HMGB1P1-201ENST00000522557 GRTP1Q5TC63 336 aa4.53□□□□□ -1.68
HMGB1P1-201ENST00000522557 PLBD1Q6P4A8 553 aa4.53□□□□□ -1.68
HMGB1P1-201ENST00000522557 FIGLAQ6QHK4 219 aa4.53□□□□□ -1.68
HMGB1P1-201ENST00000522557 LINGO4Q6UY18 593 aa4.53□□□□□ -1.68
HMGB1P1-201ENST00000522557 CEP57L1Q8IYX8 460 aa4.53□□□□□ -1.68
HMGB1P1-201ENST00000522557 ZNF34Q8IZ26 560 aa4.53□□□□□ -1.68
HMGB1P1-201ENST00000522557 EMC1Q8N766 993 aa4.53□□□□□ -1.68
HMGB1P1-201ENST00000522557 OCC1Q8TAD7 63 aa4.53□□□□□ -1.68
HMGB1P1-201ENST00000522557 FAM216AQ8WUB2 273 aa4.53□□□□□ -1.68
HMGB1P1-201ENST00000522557 NUDCD2Q8WVJ2 157 aa4.53□□□□□ -1.68
HMGB1P1-201ENST00000522557 CORO2AQ92828 525 aa4.53□□□□□ -1.68
HMGB1P1-201ENST00000522557 SPATA17Q96L03 361 aa4.53□□□□□ -1.68
HMGB1P1-201ENST00000522557 JAKMIP1Q96N16 626 aaKnown RBP4.53□□□□□ -1.68
HMGB1P1-201ENST00000522557 RAB3IPQ96QF0 476 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P1-201ENST00000522557 OR6C1Q96RD1 312 aa4.53□□□□□ -1.68
HMGB1P1-201ENST00000522557 GPATCH1Q9BRR8 931 aaKnown RBP4.53□□□□□ -1.68
HMGB1P1-201ENST00000522557 TUBB2BQ9BVA1 445 aa4.53□□□□□ -1.68
HMGB1P1-201ENST00000522557 MOV10L1Q9BXT6 1211 aaKnown RBP4.53□□□□□ -1.68
HMGB1P1-201ENST00000522557 RSPH9Q9H1X1 276 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P1-201ENST00000522557 SLA2Q9H6Q3 261 aa4.53□□□□□ -1.68
HMGB1P1-201ENST00000522557 RHCGQ9UBD6 479 aa4.53□□□□□ -1.68
HMGB1P1-201ENST00000522557 PAM16Q9Y3D7 125 aa4.53□□□□□ -1.68
HMGB1P1-201ENST00000522557 NOTCH4Q99466 2003 aa4.52□□□□□ -1.69
HMGB1P1-201ENST00000522557 LILRA5A6NI73 299 aa4.52□□□□□ -1.69
HMGB1P1-201ENST00000522557 PLK4O00444 970 aa4.52□□□□□ -1.69
HMGB1P1-201ENST00000522557 MID1O15344 667 aa4.52□□□□□ -1.69
HMGB1P1-201ENST00000522557 HOXC6P09630 235 aa4.52□□□□□ -1.69
HMGB1P1-201ENST00000522557 PFKFB1P16118 471 aa4.52□□□□□ -1.69
HMGB1P1-201ENST00000522557 ZNF12P17014 697 aa4.52□□□□□ -1.69
HMGB1P1-201ENST00000522557 ADRA2CP18825 462 aa4.52□□□□□ -1.69
HMGB1P1-201ENST00000522557 CORO1AP31146 461 aaKnown RBP4.52□□□□□ -1.69
HMGB1P1-201ENST00000522557 PCYT1AP49585 367 aa4.52□□□□□ -1.69
HMGB1P1-201ENST00000522557 ACSM1Q08AH1 577 aa4.52□□□□□ -1.69
HMGB1P1-201ENST00000522557 C6orf136Q5SQH8 315 aa4.52□□□□□ -1.69
HMGB1P1-201ENST00000522557 PLA2G4FQ68DD2 849 aa4.52□□□□□ -1.69
HMGB1P1-201ENST00000522557 ZNF324BQ6AW86 544 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P1-201ENST00000522557 METTL23Q86XA0 190 aa4.52□□□□□ -1.69
HMGB1P1-201ENST00000522557 SPATA2LQ8IUW3 424 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P1-201ENST00000522557 ADHFE1Q8IWW8 467 aa4.52□□□□□ -1.69
HMGB1P1-201ENST00000522557 CAMKVQ8NCB2 501 aa4.52□□□□□ -1.69
HMGB1P1-201ENST00000522557 MRPS27Q92552 414 aaKnown RBP4.52□□□□□ -1.69
HMGB1P1-201ENST00000522557 ERO1AQ96HE7 468 aa4.52□□□□□ -1.69
HMGB1P1-201ENST00000522557 TXNDC15Q96J42 360 aa4.52□□□□□ -1.69
HMGB1P1-201ENST00000522557 SMC6Q96SB8 1091 aa4.52□□□□□ -1.69
HMGB1P1-201ENST00000522557 KXD1Q9BQD3 176 aa4.52□□□□□ -1.69
HMGB1P1-201ENST00000522557 IL25Q9H293 177 aa4.52□□□□□ -1.69
HMGB1P1-201ENST00000522557 ABCF3Q9NUQ8 709 aa4.52□□□□□ -1.69
HMGB1P1-201ENST00000522557 ARGLU1Q9NWB6 273 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P1-201ENST00000522557 LOXL2Q9Y4K0 774 aa4.52□□□□□ -1.69
HMGB1P1-201ENST00000522557 ANKUB1A6NFN9 424 aa4.51□□□□□ -1.69
HMGB1P1-201ENST00000522557 H0YIN7 160 aa4.51□□□□□ -1.69
HMGB1P1-201ENST00000522557 HS3ST1O14792 307 aa4.51□□□□□ -1.69
HMGB1P1-201ENST00000522557 SSX4O60224 188 aa4.51□□□□□ -1.69
HMGB1P1-201ENST00000522557 SYNCRIPO60506 623 aaKnown RBP4.51□□□□□ -1.69
HMGB1P1-201ENST00000522557 GCNT3O95395 438 aa4.51□□□□□ -1.69
HMGB1P1-201ENST00000522557 ZFYP08048 801 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P1-201ENST00000522557 DNASE1P24855 282 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms