RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 MYL9P24844 172 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 MPSTP25325 297 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 AMZ1Q400G9 498 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 SLC25A24Q6NUK1 477 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 KLHL17Q6TDP4 642 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 ADCY4Q8NFM4 1077 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 SLC47A1Q96FL8 570 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 ZSCAN5AQ9BUG6 496 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 INSL5Q9Y5Q6 135 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 NFAT5O94916 1531 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 LCA5LO95447 670 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 AGXTP21549 392 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 CPN2P22792 545 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 IL12BP29460 328 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 NR1H2P55055 460 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 SLC13A2Q13183 592 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 EML3Q32P44 896 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 MFSD5Q6N075 450 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 FBXL22Q6P050 247 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 TBC1D21Q8IYX1 336 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 C11orf65Q8NCR3 313 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 AGAP11Q8TF27 550 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 TIMM22Q9Y584 194 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 VNN1O95497 513 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 DRICH1Q6PGQ1 229 aaPredicted RBP16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 JAZF1Q86VZ6 243 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 POF1BQ8WVV4 589 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 RHOBTB2Q9BYZ6 727 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 CRISPLD1Q9H336 500 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 TOR4AQ9NXH8 423 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 SLC17A7Q9P2U7 560 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 ADGRE2Q9UHX3 823 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 SCML2Q9UQR0 700 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 PCDHB11Q9Y5F2 797 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 TNFP01375 233 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 IL12RB1P42701 662 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 C1QTNF8P60827 252 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 POMZP3Q6PJE2 187 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 B3GNT6Q6ZMB0 384 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 CADM2Q8N3J6 435 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 ZHX1-C8orf76Q96EF9 292 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 DPYSL5Q9BPU6 564 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 SLC2A4RGQ9NR83 387 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 GDAP2Q9NXN4 497 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 NMBRP28336 390 aa16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 PTDSS1P48651 473 aaKnown RBP16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 HADHBP55084 474 aaKnown RBP16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 FAM91A1Q658Y4 838 aa16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 NEK7Q8TDX7 302 aa16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 ANKHQ9HCJ1 492 aa16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 PNPLA3Q9NST1 481 aa16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 EHD3Q9NZN3 535 aa16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 BTBD3Q9Y2F9 522 aa16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 VIRMAQ69YN4 1812 aaKnown RBP16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 CPED1A4D0V7 1026 aa16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 ACP5P13686 325 aa16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 HOXB2P14652 356 aa16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 HCAR3P49019 387 aa16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 NRG1Q02297 640 aaPredicted RBP16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 PDK3Q15120 406 aa16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 METTL21CQ5VZV1 264 aa16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 SUN3Q8TAQ9 357 aa16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 GSDMCQ9BYG8 508 aa16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 CCSER2Q9H7U1 834 aa16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 CDH7Q9ULB5 785 aa16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 RUVBL1Q9Y265 456 aaKnown RBP16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 ATXN2Q99700 1313 aaKnown RBP16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 CCKBRP32239 447 aa16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 RABGGTBP53611 331 aa16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 WDR45BQ5MNZ6 344 aa16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 TMEM110Q86TL2 294 aa16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 CROCCP3Q8IVE0 287 aa16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 TMEM192Q8IY95 271 aa16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 PRSS58Q8IYP2 241 aa16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 VANGL1Q8TAA9 524 aaPredicted RBP16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 ZNF296Q8WUU4 475 aaPredicted RBP16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 C8orf4Q9NR00 106 aa16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 FBXL12Q9NXK8 326 aa16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 CIDEBQ9UHD4 219 aa16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 PACSIN3Q9UKS6 424 aa16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 TLX3O43711 291 aaPredicted RBP16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 ONECUT3O60422 494 aaPredicted RBP16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 KRT36O76013 467 aa16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 CASRP41180 1078 aa16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 XIAPP98170 497 aa16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 PLEKHG4Q58EX7 1191 aa16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 GRASPQ7Z6J2 395 aaPredicted RBP16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 ALYREFQ86V81 257 aaKnown RBP16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 ZMIZ2Q8NF64 920 aa16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 SQORQ9Y6N5 450 aa16.04■□□□□ 0.16
PCDHA3-201ENST00000522353 SCAMP1O15126 338 aa16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 GJA1P17302 382 aa16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 MAPK10P53779 464 aa16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 ZSWIM7Q19AV6 140 aa16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 DAW1Q8N136 415 aa16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 NIPA2Q8N8Q9 360 aa16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 HCAR2Q8TDS4 363 aa16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 SLC38A4Q969I6 547 aa16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 ALKBH4Q9NXW9 302 aa16.03■□□□□ 0.16
PCDHA3-201ENST00000522353 ZDHHC3Q9NYG2 299 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms