RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 LONP2Q86WA8 852 aa12.85□□□□□ -0.35
CPNE3-205ENST00000522240 TRAPPC5Q8IUR0 188 aa12.85□□□□□ -0.35
CPNE3-205ENST00000522240 PLD6Q8N2A8 252 aaKnown RBP12.85□□□□□ -0.35
CPNE3-205ENST00000522240 OXR1Q8N573 874 aa12.85□□□□□ -0.35
CPNE3-205ENST00000522240 ZBTB2Q8N680 514 aa12.85□□□□□ -0.35
CPNE3-205ENST00000522240 TMEM105Q8N8V8 129 aa12.85□□□□□ -0.35
CPNE3-205ENST00000522240 DTWD2Q8NBA8 298 aa12.85□□□□□ -0.35
CPNE3-205ENST00000522240 DENND1AQ8TEH3 1009 aa12.85□□□□□ -0.35
CPNE3-205ENST00000522240 SGF29Q96ES7 293 aa12.85□□□□□ -0.35
CPNE3-205ENST00000522240 PDLIM5Q96HC4 596 aaKnown RBP12.85□□□□□ -0.35
CPNE3-205ENST00000522240 KCNK17Q96T54 332 aa12.85□□□□□ -0.35
CPNE3-205ENST00000522240 SLC30A3Q99726 388 aa12.85□□□□□ -0.35
CPNE3-205ENST00000522240 MYOCQ99972 504 aa12.85□□□□□ -0.35
CPNE3-205ENST00000522240 ORAI3Q9BRQ5 295 aa12.85□□□□□ -0.35
CPNE3-205ENST00000522240 LGR4Q9BXB1 951 aa12.85□□□□□ -0.35
CPNE3-205ENST00000522240 DERL2Q9GZP9 239 aa12.85□□□□□ -0.35
CPNE3-205ENST00000522240 EBF2Q9HAK2 575 aa12.85□□□□□ -0.35
CPNE3-205ENST00000522240 SARS2Q9NP81 518 aaKnown RBP12.85□□□□□ -0.35
CPNE3-205ENST00000522240 GPR27Q9NS67 375 aa12.85□□□□□ -0.35
CPNE3-205ENST00000522240 IGSF5Q9NSI5 407 aa12.85□□□□□ -0.35
CPNE3-205ENST00000522240 PLLPQ9Y342 182 aa12.85□□□□□ -0.35
CPNE3-205ENST00000522240 DNMT3AQ9Y6K1 912 aaPredicted RBP12.85□□□□□ -0.35
CPNE3-205ENST00000522240 GVINP1Q7Z2Y8 2422 aa12.85□□□□□ -0.35
CPNE3-205ENST00000522240 DOCK9Q9BZ29 2069 aa12.84□□□□□ -0.35
CPNE3-205ENST00000522240 C17orf113A0A1B0GUU1 675 aa12.84□□□□□ -0.35
CPNE3-205ENST00000522240 POM121BA6NF01 834 aa12.84□□□□□ -0.35
CPNE3-205ENST00000522240 C3orf80F5H4A9 247 aa12.84□□□□□ -0.35
CPNE3-205ENST00000522240 KMOO15229 486 aa12.84□□□□□ -0.35
CPNE3-205ENST00000522240 PLIN3O60664 434 aa12.84□□□□□ -0.35
CPNE3-205ENST00000522240 DNAJC6O75061 913 aa12.84□□□□□ -0.35
CPNE3-205ENST00000522240 TSPAN12O95859 305 aa12.84□□□□□ -0.35
CPNE3-205ENST00000522240 TOP3BO95985 862 aaKnown RBP12.84□□□□□ -0.35
CPNE3-205ENST00000522240 PROCP04070 461 aa12.84□□□□□ -0.35
CPNE3-205ENST00000522240 DGKAP23743 735 aa12.84□□□□□ -0.35
CPNE3-205ENST00000522240 CCR7P32248 378 aa12.84□□□□□ -0.35
CPNE3-205ENST00000522240 ETV4P43268 484 aa12.84□□□□□ -0.35
CPNE3-205ENST00000522240 PGGT1BP53609 377 aa12.84□□□□□ -0.35
CPNE3-205ENST00000522240 CLDN2P57739 230 aa12.84□□□□□ -0.35
CPNE3-205ENST00000522240 IL2P60568 153 aa12.84□□□□□ -0.35
CPNE3-205ENST00000522240 PLOD1Q02809 727 aaPredicted RBP12.84□□□□□ -0.35
CPNE3-205ENST00000522240 DMWDQ09019 674 aa12.84□□□□□ -0.35
CPNE3-205ENST00000522240 DLG1Q12959 904 aa12.84□□□□□ -0.35
CPNE3-205ENST00000522240 MPP2Q14168 576 aa12.84□□□□□ -0.35
CPNE3-205ENST00000522240 CSHL1Q14406 222 aa12.84□□□□□ -0.35
CPNE3-205ENST00000522240 ACAP2Q15057 778 aa12.84□□□□□ -0.35
CPNE3-205ENST00000522240 SEPT7Q16181 437 aaKnown RBP12.84□□□□□ -0.35
CPNE3-205ENST00000522240 ZNF658BQ4V348 819 aaPredicted RBP12.84□□□□□ -0.35
CPNE3-205ENST00000522240 TECRLQ5HYJ1 363 aa12.84□□□□□ -0.35
CPNE3-205ENST00000522240 N4BP2L1Q5TBK1 243 aaPredicted RBP12.84□□□□□ -0.35
CPNE3-205ENST00000522240 DOK6Q6PKX4 331 aa12.84□□□□□ -0.35
CPNE3-205ENST00000522240 TMEM220Q6QAJ8 160 aa12.84□□□□□ -0.35
CPNE3-205ENST00000522240 CPNE9Q8IYJ1 553 aa12.84□□□□□ -0.35
CPNE3-205ENST00000522240 MAML2Q8IZL2 1156 aaPredicted RBP12.84□□□□□ -0.35
CPNE3-205ENST00000522240 FRMD1Q8N878 549 aa12.84□□□□□ -0.35
CPNE3-205ENST00000522240 ANKRD42Q8N9B4 389 aa12.84□□□□□ -0.35
CPNE3-205ENST00000522240 RDH11Q8TC12 318 aa12.84□□□□□ -0.35
CPNE3-205ENST00000522240 HM13Q8TCT9 377 aa12.84□□□□□ -0.35
CPNE3-205ENST00000522240 ANKRD49Q8WVL7 239 aa12.84□□□□□ -0.35
CPNE3-205ENST00000522240 SNX19Q92543 992 aa12.84□□□□□ -0.35
CPNE3-205ENST00000522240 GLMNQ92990 594 aa12.84□□□□□ -0.35
CPNE3-205ENST00000522240 FAM136AQ96C01 138 aa12.84□□□□□ -0.35
CPNE3-205ENST00000522240 SCARF2Q96GP6 870 aaPredicted RBP12.84□□□□□ -0.35
CPNE3-205ENST00000522240 BMFQ96LC9 184 aa12.84□□□□□ -0.35
CPNE3-205ENST00000522240 WDR92Q96MX6 357 aa12.84□□□□□ -0.35
CPNE3-205ENST00000522240 GPR78Q96P69 363 aa12.84□□□□□ -0.35
CPNE3-205ENST00000522240 CCM2Q9BSQ5 444 aa12.84□□□□□ -0.35
CPNE3-205ENST00000522240 DUSP15Q9H1R2 295 aaPredicted RBP12.84□□□□□ -0.35
CPNE3-205ENST00000522240 NMRAL1Q9HBL8 299 aa12.84□□□□□ -0.35
CPNE3-205ENST00000522240 SLC17A7Q9P2U7 560 aa12.84□□□□□ -0.35
CPNE3-205ENST00000522240 GALPQ9UBC7 116 aa12.84□□□□□ -0.35
CPNE3-205ENST00000522240 EMCNQ9ULC0 261 aa12.84□□□□□ -0.35
CPNE3-205ENST00000522240 MYO15AQ9UKN7 3530 aa12.83□□□□□ -0.36
CPNE3-205ENST00000522240 MEI4A8MW99 385 aa12.83□□□□□ -0.36
CPNE3-205ENST00000522240 TNFRSF10CO14798 259 aa12.83□□□□□ -0.36
CPNE3-205ENST00000522240 LIN7AO14910 233 aaPredicted RBP12.83□□□□□ -0.36
CPNE3-205ENST00000522240 GRID2O43424 1007 aa12.83□□□□□ -0.36
CPNE3-205ENST00000522240 CEACAM5P06731 702 aa12.83□□□□□ -0.36
CPNE3-205ENST00000522240 RBP1P09455 135 aa12.83□□□□□ -0.36
CPNE3-205ENST00000522240 DHRS4L1P0CG22 281 aa12.83□□□□□ -0.36
CPNE3-205ENST00000522240 MPC1LP0DKB6 136 aa12.83□□□□□ -0.36
CPNE3-205ENST00000522240 CD1DP15813 335 aa12.83□□□□□ -0.36
CPNE3-205ENST00000522240 CHN1P15882 459 aa12.83□□□□□ -0.36
CPNE3-205ENST00000522240 ITGB6P18564 788 aa12.83□□□□□ -0.36
CPNE3-205ENST00000522240 BCKDHBP21953 392 aa12.83□□□□□ -0.36
CPNE3-205ENST00000522240 HTR1BP28222 390 aa12.83□□□□□ -0.36
CPNE3-205ENST00000522240 GMPRP36959 345 aa12.83□□□□□ -0.36
CPNE3-205ENST00000522240 FNTBP49356 437 aa12.83□□□□□ -0.36
CPNE3-205ENST00000522240 ATP1A2P50993 1020 aa12.83□□□□□ -0.36
CPNE3-205ENST00000522240 SYTL3Q4VX76 610 aa12.83□□□□□ -0.36
CPNE3-205ENST00000522240 NEK10Q6ZWH5 1172 aa12.83□□□□□ -0.36
CPNE3-205ENST00000522240 C11orf96Q7Z7L8 435 aa12.83□□□□□ -0.36
CPNE3-205ENST00000522240 IQCHQ86VS3 1027 aa12.83□□□□□ -0.36
CPNE3-205ENST00000522240 ZNF547Q8IVP9 402 aa12.83□□□□□ -0.36
CPNE3-205ENST00000522240 MYO1HQ8N1T3 1032 aa12.83□□□□□ -0.36
CPNE3-205ENST00000522240 OR56A4Q8NGH8 313 aa12.83□□□□□ -0.36
CPNE3-205ENST00000522240 OR2L2Q8NH16 312 aa12.83□□□□□ -0.36
CPNE3-205ENST00000522240 RHEBL1Q8TAI7 183 aa12.83□□□□□ -0.36
CPNE3-205ENST00000522240 NAT14Q8WUY8 206 aa12.83□□□□□ -0.36
CPNE3-205ENST00000522240 ASZ1Q8WWH4 475 aa12.83□□□□□ -0.36
CPNE3-205ENST00000522240 ELMO1Q92556 727 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms