RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 SHBQ15464 509 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 ZNF658BQ4V348 819 aaPredicted RBP23.74■■□□□ 1.39
PVT1-212ENST00000521951 NAPRTQ6XQN6 538 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 GPBAR1Q8TDU6 330 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 GPR21Q99679 349 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 LRRC61Q9BV99 259 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 TMEM109Q9BVC6 243 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 GAREM1Q9H706 876 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 SPATS2LQ9NUQ6 558 aaKnown RBP23.74■■□□□ 1.39
PVT1-212ENST00000521951 TAS2R13Q9NYV9 303 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 KCNK6Q9Y257 313 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 OTOGLQ3ZCN5 2332 aa23.73■■□□□ 1.39
PVT1-212ENST00000521951 TLDC2A0PJX2 215 aa23.73■■□□□ 1.39
PVT1-212ENST00000521951 RASGRF2O14827 1237 aa23.73■■□□□ 1.39
PVT1-212ENST00000521951 KCNJ13O60928 360 aa23.73■■□□□ 1.39
PVT1-212ENST00000521951 VPS26AO75436 327 aa23.73■■□□□ 1.39
PVT1-212ENST00000521951 KRT38O76015 456 aa23.73■■□□□ 1.39
PVT1-212ENST00000521951 ENGP17813 658 aa23.73■■□□□ 1.39
PVT1-212ENST00000521951 CD9P21926 228 aa23.73■■□□□ 1.39
PVT1-212ENST00000521951 CNTFP26441 200 aa23.73■■□□□ 1.39
PVT1-212ENST00000521951 AK4P27144 223 aaPredicted RBP23.73■■□□□ 1.39
PVT1-212ENST00000521951 AOAHP28039 575 aa23.73■■□□□ 1.39
PVT1-212ENST00000521951 ARRB1P49407 418 aaPredicted RBP23.73■■□□□ 1.39
PVT1-212ENST00000521951 CLCN7P51798 805 aa23.73■■□□□ 1.39
PVT1-212ENST00000521951 PGGT1BP53609 377 aa23.73■■□□□ 1.39
PVT1-212ENST00000521951 POU4F1Q01851 419 aa23.73■■□□□ 1.39
PVT1-212ENST00000521951 SPEM2Q0P670 501 aa23.73■■□□□ 1.39
PVT1-212ENST00000521951 LRP8Q14114 963 aa23.73■■□□□ 1.39
PVT1-212ENST00000521951 NFE2L1Q14494 772 aa23.73■■□□□ 1.39
PVT1-212ENST00000521951 XKR5Q6UX68 686 aa23.73■■□□□ 1.39
PVT1-212ENST00000521951 TAOK1Q7L7X3 1001 aa23.73■■□□□ 1.39
PVT1-212ENST00000521951 NRROSQ86YC3 692 aa23.73■■□□□ 1.39
PVT1-212ENST00000521951 SPNS2Q8IVW8 549 aa23.73■■□□□ 1.39
PVT1-212ENST00000521951 CFAP206Q8IYR0 622 aa23.73■■□□□ 1.39
PVT1-212ENST00000521951 LILRA3Q8N6C8 439 aaPredicted RBP23.73■■□□□ 1.39
PVT1-212ENST00000521951 HM13Q8TCT9 377 aa23.73■■□□□ 1.39
PVT1-212ENST00000521951 SLC30A3Q99726 388 aa23.73■■□□□ 1.39
PVT1-212ENST00000521951 CAB39LQ9H9S4 337 aa23.73■■□□□ 1.39
PVT1-212ENST00000521951 IL21RQ9HBE5 538 aa23.73■■□□□ 1.39
PVT1-212ENST00000521951 SPASTQ9UBP0 616 aa23.73■■□□□ 1.39
PVT1-212ENST00000521951 CTNNAL1Q9UBT7 734 aa23.73■■□□□ 1.39
PVT1-212ENST00000521951 A0A1B0GTQ1 180 aa23.72■■□□□ 1.39
PVT1-212ENST00000521951 KLHL33A6NCF5 533 aa23.72■■□□□ 1.39
PVT1-212ENST00000521951 DFNA5O60443 496 aa23.72■■□□□ 1.39
PVT1-212ENST00000521951 PIAS2O75928 621 aa23.72■■□□□ 1.39
PVT1-212ENST00000521951 CELA2BP08218 269 aaPredicted RBP23.72■■□□□ 1.39
PVT1-212ENST00000521951 DMPKQ09013 629 aa23.72■■□□□ 1.39
PVT1-212ENST00000521951 ILF3Q12906 894 aaKnown RBP eCLIP23.72■■□□□ 1.396e-8■■■□□ 15.7
PVT1-212ENST00000521951 BNIP3Q12983 259 aa23.72■■□□□ 1.39
PVT1-212ENST00000521951 USP10Q14694 798 aaKnown RBP23.72■■□□□ 1.39
PVT1-212ENST00000521951 RASA2Q15283 850 aa23.72■■□□□ 1.39
PVT1-212ENST00000521951 LGSNQ5TDP6 509 aa23.72■■□□□ 1.39
PVT1-212ENST00000521951 FAM83HQ6ZRV2 1179 aaPredicted RBP23.72■■□□□ 1.39
PVT1-212ENST00000521951 SIDT2Q8NBJ9 832 aaKnown RBP23.72■■□□□ 1.39
PVT1-212ENST00000521951 OR2I1PQ8NGU4 316 aa23.72■■□□□ 1.39
PVT1-212ENST00000521951 GTPBP2Q9BX10 602 aaKnown RBP23.72■■□□□ 1.39
PVT1-212ENST00000521951 EURLQ9NYK6 297 aa23.72■■□□□ 1.39
PVT1-212ENST00000521951 TBK1Q9UHD2 729 aa23.72■■□□□ 1.39
PVT1-212ENST00000521951 DHRS7Q9Y394 339 aa23.72■■□□□ 1.39
PVT1-212ENST00000521951 PRR19A6NJB7 356 aa23.71■■□□□ 1.39
PVT1-212ENST00000521951 SDC3O75056 442 aa23.71■■□□□ 1.39
PVT1-212ENST00000521951 CDH16O75309 829 aa23.71■■□□□ 1.39
PVT1-212ENST00000521951 KRT37O76014 449 aa23.71■■□□□ 1.39
PVT1-212ENST00000521951 CER1O95813 267 aa23.71■■□□□ 1.39
PVT1-212ENST00000521951 SNRPAP09012 282 aaKnown RBP23.71■■□□□ 1.39
PVT1-212ENST00000521951 VCLP18206 1134 aa23.71■■□□□ 1.39
PVT1-212ENST00000521951 CLCNKAP51800 687 aa23.71■■□□□ 1.39
PVT1-212ENST00000521951 ZNF844Q08AG5 666 aa23.71■■□□□ 1.39
PVT1-212ENST00000521951 BOP1Q14137 746 aaKnown RBP23.71■■□□□ 1.39
PVT1-212ENST00000521951 SF3A2Q15428 464 aaKnown RBP23.71■■□□□ 1.39
PVT1-212ENST00000521951 UGT3A1Q6NUS8 523 aa23.71■■□□□ 1.39
PVT1-212ENST00000521951 LRIG3Q6UXM1 1119 aa23.71■■□□□ 1.39
PVT1-212ENST00000521951 OTOAQ7RTW8 1153 aa23.71■■□□□ 1.39
PVT1-212ENST00000521951 HDXQ7Z353 690 aa23.71■■□□□ 1.39
PVT1-212ENST00000521951 PIM3Q86V86 326 aa23.71■■□□□ 1.39
PVT1-212ENST00000521951 CEP97Q8IW35 865 aa23.71■■□□□ 1.39
PVT1-212ENST00000521951 FSTL5Q8N475 847 aaPredicted RBP23.71■■□□□ 1.39
PVT1-212ENST00000521951 ZNF548Q8NEK5 533 aaPredicted RBP23.71■■□□□ 1.39
PVT1-212ENST00000521951 GIMAP7Q8NHV1 300 aa23.71■■□□□ 1.39
PVT1-212ENST00000521951 CD200R1Q8TD46 325 aa23.71■■□□□ 1.39
PVT1-212ENST00000521951 LMX1AQ8TE12 382 aa23.71■■□□□ 1.39
PVT1-212ENST00000521951 ANKRD7Q92527 254 aa23.71■■□□□ 1.39
PVT1-212ENST00000521951 GSDMCQ9BYG8 508 aa23.71■■□□□ 1.39
PVT1-212ENST00000521951 COG4Q9H9E3 785 aa23.71■■□□□ 1.39
PVT1-212ENST00000521951 ARHGEF17Q96PE2 2063 aaPredicted RBP23.7■■□□□ 1.39
PVT1-212ENST00000521951 SLC5A10A0PJK1 596 aa23.7■■□□□ 1.38
PVT1-212ENST00000521951 TRIM49D1C9J1S8 452 aa23.7■■□□□ 1.38
PVT1-212ENST00000521951 KPNA5O15131 536 aa23.7■■□□□ 1.38
PVT1-212ENST00000521951 AQP9O43315 295 aa23.7■■□□□ 1.38
PVT1-212ENST00000521951 LRP3O75074 770 aa23.7■■□□□ 1.38
PVT1-212ENST00000521951 ACTR1BP42025 376 aa23.7■■□□□ 1.38
PVT1-212ENST00000521951 SKIV2L2P42285 1042 aaKnown RBP23.7■■□□□ 1.38
PVT1-212ENST00000521951 SLC12A2P55011 1212 aa23.7■■□□□ 1.38
PVT1-212ENST00000521951 ACTR1AP61163 376 aa23.7■■□□□ 1.38
PVT1-212ENST00000521951 ELOCQ15369 112 aa23.7■■□□□ 1.38
PVT1-212ENST00000521951 METRNLQ641Q3 311 aa23.7■■□□□ 1.38
PVT1-212ENST00000521951 TAF8Q7Z7C8 310 aa23.7■■□□□ 1.38
PVT1-212ENST00000521951 ZBTB2Q8N680 514 aa23.7■■□□□ 1.38
PVT1-212ENST00000521951 INPP5DQ92835 1189 aa23.7■■□□□ 1.38
PVT1-212ENST00000521951 PHOX2BQ99453 314 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms