RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 CTAGE8P0CG41 777 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 GAGE12FP0CL80 117 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 GAGE12GP0CL81 117 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 GAGE12IP0CL82 117 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 CASTP20810 708 aaKnown RBP3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 ATP5DP30049 168 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 RPL3P39023 403 aaKnown RBP3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 CTSCP53634 463 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 ROR2Q01974 943 aaKnown RBP3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 EGR4Q05215 589 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 ZNF155Q12901 538 aaPredicted RBP3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 GAGE1Q13065 139 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 GAGE4Q13068 117 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 DHX34Q14147 1143 aaKnown RBP3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 NFE2L1Q14494 772 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 NR1D2Q14995 579 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 TNIP1Q15025 636 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 KCNT1Q5JUK3 1230 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 PRR27Q6MZM9 219 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 C8orf82Q6P1X6 216 aaPredicted RBP3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 SYCE2Q6PIF2 218 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 TECPR1Q7Z6L1 1165 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 SATL1Q86VE3 508 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 GLCCI1Q86VQ1 547 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 CTAGE4Q8IX94 777 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 CLIP4Q8N3C7 705 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 PGBD5Q8N414 524 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 TMEM199Q8N511 208 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 NANOGP1Q8N7R0 232 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 GRAPLQ8TC17 118 aaPredicted RBP3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 DENND1AQ8TEH3 1009 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 ZFAND2BQ8WV99 257 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 KCNE4Q8WWG9 221 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 SPSB1Q96BD6 273 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 SCMH1Q96GD3 660 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 ERO1AQ96HE7 468 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 ZNF582Q96NG8 517 aaPredicted RBP3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 SMC6Q96SB8 1091 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 INTS14Q96SY0 518 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 CSF3RQ99062 836 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 CITED2Q99967 270 aaPredicted RBP3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 KXD1Q9BQD3 176 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 WNT5BQ9H1J7 359 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 DPAGT1Q9H3H5 408 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 Q9N2K0 584 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 NRIP3Q9NQ35 241 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 OSER1Q9NX31 292 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 NPAP1Q9NZP6 1156 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 FBXL2Q9UKC9 423 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 LIPT1Q9Y234 373 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 NME7Q9Y5B8 376 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 NFS1Q9Y697 457 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 RPS10-NUDT3A0A1W2PQS6 291 aa3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 LILRA5A6NI73 299 aa3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 H0YAE9 185 aa3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 SLC30A4O14863 429 aa3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 XRCC3O43542 346 aa3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 CLDN14O95500 239 aa3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 RAB40ALP0C0E4 278 aa3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 PSG1P11464 419 aa3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 CDC25CP30307 473 aa3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 CLCNKAP51800 687 aa3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 CLDN15P56746 228 aa3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 PTENP60484 403 aa3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 MAT1AQ00266 395 aaKnown RBP3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 SLMAPQ14BN4 828 aa3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 RABEP1Q15276 862 aa3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 CDC37Q16543 378 aaPredicted RBP3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 CTF1Q16619 201 aa3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 TDRD12Q587J7 1177 aaKnown RBP3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 FSCBQ5H9T9 825 aa3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 OTUD1Q5VV17 481 aaPredicted RBP3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 WDR73Q6P4I2 378 aa3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 IYDQ6PHW0 289 aa3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 GFRALQ6UXV0 394 aa3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 PPP1R21Q6ZMI0 780 aa3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 C15orf39Q6ZRI6 1047 aa3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 LINC00696Q6ZRV3 163 aa3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 C1QL2Q7Z5L3 287 aa3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 PALB2Q86YC2 1186 aa3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 DSELQ8IZU8 1212 aa3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 AFAP1Q8N556 730 aa3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 SLC5A8Q8N695 610 aa3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 SMRP1Q8NCR6 262 aa3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 MOSPD2Q8NHP6 518 aa3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 EXD1Q8NHP7 514 aa3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 OLIG1Q8TAK6 271 aa3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 MAGEC3Q8TD91 643 aa3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 UTP15Q8TED0 518 aaKnown RBP3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 SMPDL3BQ92485 455 aa3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 SPDL1Q96EA4 605 aa3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 SEMA3CQ99985 751 aa3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 MOV10L1Q9BXT6 1211 aaKnown RBP3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 RETREG1Q9H6L5 497 aa3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 COPS7BQ9H9Q2 264 aaPredicted RBP3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 CHMP1AQ9HD42 196 aaPredicted RBP3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 ZNF701Q9NV72 531 aaPredicted RBP3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 KLHL20Q9Y2M5 609 aa3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 KCNK7Q9Y2U2 307 aa3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 PCDHGA1Q9Y5H4 931 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms