RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 ITGALP20701 1170 aa16.7■□□□□ 0.26
SQLE-205ENST00000521232 PSMA3P25788 255 aa16.7■□□□□ 0.26
SQLE-205ENST00000521232 MC4RP32245 332 aa16.7■□□□□ 0.26
SQLE-205ENST00000521232 GFERP55789 205 aa16.7■□□□□ 0.26
SQLE-205ENST00000521232 RPS6KA1Q15418 735 aa16.7■□□□□ 0.26
SQLE-205ENST00000521232 ANKS6Q68DC2 871 aa16.7■□□□□ 0.26
SQLE-205ENST00000521232 XKR5Q6UX68 686 aa16.7■□□□□ 0.26
SQLE-205ENST00000521232 LINC00523Q86TU6 105 aa16.7■□□□□ 0.26
SQLE-205ENST00000521232 LRRC8AQ8IWT6 810 aa16.7■□□□□ 0.26
SQLE-205ENST00000521232 STYXQ8WUJ0 223 aa16.7■□□□□ 0.26
SQLE-205ENST00000521232 NKD1Q969G9 470 aa16.7■□□□□ 0.26
SQLE-205ENST00000521232 DCUN1D1Q96GG9 259 aa16.7■□□□□ 0.26
SQLE-205ENST00000521232 CDKN2AIPNLQ96HQ2 116 aa16.7■□□□□ 0.26
SQLE-205ENST00000521232 DNAJC1Q96KC8 554 aaKnown RBP16.7■□□□□ 0.26
SQLE-205ENST00000521232 COPS8Q99627 209 aa16.7■□□□□ 0.26
SQLE-205ENST00000521232 FAM96AQ9H5X1 160 aa16.7■□□□□ 0.26
SQLE-205ENST00000521232 PSMD13Q9UNM6 376 aa16.7■□□□□ 0.26
SQLE-205ENST00000521232 PIKFYVEQ9Y2I7 2098 aa16.69■□□□□ 0.26
SQLE-205ENST00000521232 IGLV3-16A0A075B6K0 115 aa16.69■□□□□ 0.26
SQLE-205ENST00000521232 TRBV5-4A0A0C4DH59 114 aa16.69■□□□□ 0.26
SQLE-205ENST00000521232 MROH6A6NGR9 719 aa16.69■□□□□ 0.26
SQLE-205ENST00000521232 CCL22O00626 93 aa16.69■□□□□ 0.26
SQLE-205ENST00000521232 ATP1B2P14415 290 aaPredicted RBP16.69■□□□□ 0.26
SQLE-205ENST00000521232 CAPZBP47756 277 aa16.69■□□□□ 0.26
SQLE-205ENST00000521232 COL9A2Q14055 689 aaPredicted RBP16.69■□□□□ 0.26
SQLE-205ENST00000521232 POU6F1Q14863 301 aa16.69■□□□□ 0.26
SQLE-205ENST00000521232 TAF1BQ53T94 588 aaPredicted RBP16.69■□□□□ 0.26
SQLE-205ENST00000521232 KIAA1614Q5VZ46 1190 aa16.69■□□□□ 0.26
SQLE-205ENST00000521232 CEACAM20Q6UY09 585 aa16.69■□□□□ 0.26
SQLE-205ENST00000521232 GPR150Q8NGU9 434 aa16.69■□□□□ 0.26
SQLE-205ENST00000521232 NAT14Q8WUY8 206 aa16.69■□□□□ 0.26
SQLE-205ENST00000521232 ZFPM2Q8WW38 1151 aa16.69■□□□□ 0.26
SQLE-205ENST00000521232 C1orf54Q8WWF1 131 aa16.69■□□□□ 0.26
SQLE-205ENST00000521232 RSC1A1Q92681 617 aa16.69■□□□□ 0.26
SQLE-205ENST00000521232 TGM7Q96PF1 710 aa16.69■□□□□ 0.26
SQLE-205ENST00000521232 INSM2Q96T92 566 aaPredicted RBP16.69■□□□□ 0.26
SQLE-205ENST00000521232 ETNK1Q9HBU6 452 aa16.69■□□□□ 0.26
SQLE-205ENST00000521232 SIDT1Q9NXL6 827 aaKnown RBP16.69■□□□□ 0.26
SQLE-205ENST00000521232 ZDHHC3Q9NYG2 299 aa16.69■□□□□ 0.26
SQLE-205ENST00000521232 ZNF148Q9UQR1 794 aa16.69■□□□□ 0.26
SQLE-205ENST00000521232 C17orf113A0A1B0GUU1 675 aa16.68■□□□□ 0.26
SQLE-205ENST00000521232 CFAP99D6REC4 459 aa16.68■□□□□ 0.26
SQLE-205ENST00000521232 SUN1O94901 812 aa16.68■□□□□ 0.26
SQLE-205ENST00000521232 PRB1P04280 392 aa16.68■□□□□ 0.26
SQLE-205ENST00000521232 CCDC175P0C221 793 aa16.68■□□□□ 0.26
SQLE-205ENST00000521232 MTHFD1P11586 935 aaKnown RBP16.68■□□□□ 0.26
SQLE-205ENST00000521232 PBLDP30039 288 aaPredicted RBP16.68■□□□□ 0.26
SQLE-205ENST00000521232 FDFT1P37268 417 aa16.68■□□□□ 0.26
SQLE-205ENST00000521232 LEPRP48357 1165 aaKnown RBP16.68■□□□□ 0.26
SQLE-205ENST00000521232 PRLHRP49683 370 aa16.68■□□□□ 0.26
SQLE-205ENST00000521232 CDKN1CP49918 316 aaPredicted RBP16.68■□□□□ 0.26
SQLE-205ENST00000521232 ATP1A2P50993 1020 aa16.68■□□□□ 0.26
SQLE-205ENST00000521232 VASH2Q86V25 355 aa16.68■□□□□ 0.26
SQLE-205ENST00000521232 CFAP206Q8IYR0 622 aa16.68■□□□□ 0.26
SQLE-205ENST00000521232 TAB3Q8N5C8 712 aaPredicted RBP16.68■□□□□ 0.26
SQLE-205ENST00000521232 JPH3Q8WXH2 748 aaPredicted RBP16.68■□□□□ 0.26
SQLE-205ENST00000521232 ZDHHC12Q96GR4 267 aa16.68■□□□□ 0.26
SQLE-205ENST00000521232 CTRCQ99895 268 aa16.68■□□□□ 0.26
SQLE-205ENST00000521232 WWP1Q9H0M0 922 aa16.68■□□□□ 0.26
SQLE-205ENST00000521232 ZNF768Q9H5H4 540 aaKnown RBP16.68■□□□□ 0.26
SQLE-205ENST00000521232 APMAPQ9HDC9 416 aa16.68■□□□□ 0.26
SQLE-205ENST00000521232 LZTFL1Q9NQ48 299 aa16.68■□□□□ 0.26
SQLE-205ENST00000521232 PIH1D1Q9NWS0 290 aaKnown RBP16.68■□□□□ 0.26
SQLE-205ENST00000521232 PILRAQ9UKJ1 303 aa16.68■□□□□ 0.26
SQLE-205ENST00000521232 COL6A6A6NMZ7 2263 aa16.68■□□□□ 0.26
SQLE-205ENST00000521232 POLR1CO15160 346 aaPredicted RBP16.67■□□□□ 0.26
SQLE-205ENST00000521232 C1QL1O75973 258 aa16.67■□□□□ 0.26
SQLE-205ENST00000521232 WT1P19544 449 aaPredicted RBP16.67■□□□□ 0.26
SQLE-205ENST00000521232 ACRV1P26436 265 aa16.67■□□□□ 0.26
SQLE-205ENST00000521232 CDH17Q12864 832 aa16.67■□□□□ 0.26
SQLE-205ENST00000521232 SIX1Q15475 284 aaPredicted RBP16.67■□□□□ 0.26
SQLE-205ENST00000521232 CCNG2Q16589 344 aa16.67■□□□□ 0.26
SQLE-205ENST00000521232 SKIDA1Q1XH10 827 aa16.67■□□□□ 0.26
SQLE-205ENST00000521232 ZRANB3Q5FWF4 1079 aa16.67■□□□□ 0.26
SQLE-205ENST00000521232 CAPRIN2Q6IMN6 1127 aaKnown RBP16.67■□□□□ 0.26
SQLE-205ENST00000521232 PRSS42Q7Z5A4 293 aa16.67■□□□□ 0.26
SQLE-205ENST00000521232 SERPINA9Q86WD7 417 aa16.67■□□□□ 0.26
SQLE-205ENST00000521232 OR52K1Q8NGK4 314 aa16.67■□□□□ 0.26
SQLE-205ENST00000521232 KLHL6Q8WZ60 621 aa16.67■□□□□ 0.26
SQLE-205ENST00000521232 ALS2CR12Q96Q35 445 aa16.67■□□□□ 0.26
SQLE-205ENST00000521232 CCM2Q9BSQ5 444 aa16.67■□□□□ 0.26
SQLE-205ENST00000521232 IMP3Q9NV31 184 aaKnown RBP16.67■□□□□ 0.26
SQLE-205ENST00000521232 SEMA5BQ9P283 1151 aa16.67■□□□□ 0.26
SQLE-205ENST00000521232 TMEM184BQ9Y519 407 aaPredicted RBP16.67■□□□□ 0.26
SQLE-205ENST00000521232 PCDHGA4Q9Y5G9 962 aa16.67■□□□□ 0.26
SQLE-205ENST00000521232 KIF1CO43896 1103 aaKnown RBP16.66■□□□□ 0.26
SQLE-205ENST00000521232 RAD1O60671 282 aa16.66■□□□□ 0.26
SQLE-205ENST00000521232 IFNB1P01574 187 aa16.66■□□□□ 0.26
SQLE-205ENST00000521232 PRSS56P0CW18 603 aa16.66■□□□□ 0.26
SQLE-205ENST00000521232 CCZ1BP86790 482 aa16.66■□□□□ 0.26
SQLE-205ENST00000521232 CCZ1P86791 482 aaPredicted RBP16.66■□□□□ 0.26
SQLE-205ENST00000521232 CACNG1Q06432 222 aa16.66■□□□□ 0.26
SQLE-205ENST00000521232 C19orf57Q0VDD7 668 aa16.66■□□□□ 0.26
SQLE-205ENST00000521232 SNX1Q13596 522 aa16.66■□□□□ 0.26
SQLE-205ENST00000521232 SEPT6Q14141 434 aa16.66■□□□□ 0.26
SQLE-205ENST00000521232 ZNF658BQ4V348 819 aaPredicted RBP16.66■□□□□ 0.26
SQLE-205ENST00000521232 CACHD1Q5VU97 1274 aa16.66■□□□□ 0.26
SQLE-205ENST00000521232 KLHL35Q6PF15 583 aa16.66■□□□□ 0.26
SQLE-205ENST00000521232 DRICH1Q6PGQ1 229 aaPredicted RBP16.66■□□□□ 0.26
SQLE-205ENST00000521232 TAS2R42Q7RTR8 314 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms