RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 BEST3Q8N1M1 668 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 MUC20Q8N307 709 aaPredicted RBP3.61□□□□□ -1.83
HDAC2-208ENST00000520746 CNBD1Q8NA66 436 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 OR8K5Q8NH50 307 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 HMGCLL1Q8TB92 370 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 MAGEC3Q8TD91 643 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 TANKQ92844 425 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 APBB2Q92870 758 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 GRAMD2BQ96HH9 432 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 INPP4AQ96PE3 977 aaPredicted RBP3.61□□□□□ -1.83
HDAC2-208ENST00000520746 MTERF1Q99551 399 aaKnown RBP3.61□□□□□ -1.83
HDAC2-208ENST00000520746 SEPT5Q99719 369 aaPredicted RBP3.61□□□□□ -1.83
HDAC2-208ENST00000520746 C1QTNF4Q9BXJ3 329 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 TEX13AQ9BXU3 409 aaPredicted RBP3.61□□□□□ -1.83
HDAC2-208ENST00000520746 GHITMQ9H3K2 345 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 SYNCQ9H7C4 482 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 SEBOXQ9HB31 216 aaPredicted RBP3.61□□□□□ -1.83
HDAC2-208ENST00000520746 LTB4R2Q9NPC1 389 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 SMARCAL1Q9NZC9 954 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 CWC15Q9P013 229 aaKnown RBP3.61□□□□□ -1.83
HDAC2-208ENST00000520746 COPG2Q9UBF2 871 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 OR14J1Q9UGF5 321 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 ZNF215Q9UL58 517 aaPredicted RBP3.61□□□□□ -1.83
HDAC2-208ENST00000520746 KCNS2Q9ULS6 477 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 LOXL2Q9Y4K0 774 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 CLIC4Q9Y696 253 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 SESN1Q9Y6P5 492 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 KIF24Q5T7B8 1368 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 LTN1O94822 1766 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 C10orf71Q711Q0 1435 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 C5P01031 1676 aa3.6□□□□□ -1.83
HDAC2-208ENST00000520746 PLSCR5A0PG75 271 aa3.6□□□□□ -1.83
HDAC2-208ENST00000520746 A6NCN8 305 aa3.6□□□□□ -1.83
HDAC2-208ENST00000520746 M0QZ24 198 aa3.6□□□□□ -1.83
HDAC2-208ENST00000520746 ATP2A1O14983 1001 aa3.6□□□□□ -1.83
HDAC2-208ENST00000520746 VILLO15195 856 aa3.6□□□□□ -1.83
HDAC2-208ENST00000520746 MID1O15344 667 aa3.6□□□□□ -1.83
HDAC2-208ENST00000520746 SLC16A5O15375 505 aa3.6□□□□□ -1.83
HDAC2-208ENST00000520746 SPINT2O43291 252 aa3.6□□□□□ -1.83
HDAC2-208ENST00000520746 HS6ST1O60243 411 aa3.6□□□□□ -1.83
HDAC2-208ENST00000520746 RFPL2O75678 378 aa3.6□□□□□ -1.83
HDAC2-208ENST00000520746 OR2C1O95371 312 aa3.6□□□□□ -1.83
HDAC2-208ENST00000520746 PMS2P2O95744 297 aa3.6□□□□□ -1.83
HDAC2-208ENST00000520746 UBA1P22314 1058 aaKnown RBP3.6□□□□□ -1.83
HDAC2-208ENST00000520746 ALDH1B1P30837 517 aa3.6□□□□□ -1.83
HDAC2-208ENST00000520746 EPHX2P34913 555 aa3.6□□□□□ -1.83
HDAC2-208ENST00000520746 CLCNKAP51800 687 aa3.6□□□□□ -1.83
HDAC2-208ENST00000520746 CDH8P55286 799 aa3.6□□□□□ -1.83
HDAC2-208ENST00000520746 ACSM2AQ08AH3 577 aa3.6□□□□□ -1.83
HDAC2-208ENST00000520746 CDC16Q13042 620 aa3.6□□□□□ -1.83
HDAC2-208ENST00000520746 TNFAIP1Q13829 316 aa3.6□□□□□ -1.83
HDAC2-208ENST00000520746 PNLIPRP3Q17RR3 467 aa3.6□□□□□ -1.83
HDAC2-208ENST00000520746 KIF19Q2TAC6 998 aa3.6□□□□□ -1.83
HDAC2-208ENST00000520746 KCNT1Q5JUK3 1230 aa3.6□□□□□ -1.83
HDAC2-208ENST00000520746 ACSM2BQ68CK6 577 aa3.6□□□□□ -1.83
HDAC2-208ENST00000520746 ZNF280DQ6N043 979 aa3.6□□□□□ -1.83
HDAC2-208ENST00000520746 FAM122CQ6P4D5 195 aa3.6□□□□□ -1.83
HDAC2-208ENST00000520746 SDCCAG8Q86SQ7 713 aaPredicted RBP3.6□□□□□ -1.83
HDAC2-208ENST00000520746 CHERPQ8IWX8 916 aaKnown RBP3.6□□□□□ -1.83
HDAC2-208ENST00000520746 RNF168Q8IYW5 571 aaPredicted RBP3.6□□□□□ -1.83
HDAC2-208ENST00000520746 ZNF34Q8IZ26 560 aa3.6□□□□□ -1.83
HDAC2-208ENST00000520746 SRBD1Q8N5C6 995 aaKnown RBP3.6□□□□□ -1.83
HDAC2-208ENST00000520746 PCDH20Q8N6Y1 951 aaKnown RBP3.6□□□□□ -1.83
HDAC2-208ENST00000520746 OR2AK2Q8NG84 335 aa3.6□□□□□ -1.83
HDAC2-208ENST00000520746 LILRB1Q8NHL6 650 aaPredicted RBP3.6□□□□□ -1.83
HDAC2-208ENST00000520746 ELMOD3Q96FG2 381 aa3.6□□□□□ -1.83
HDAC2-208ENST00000520746 CAPNS2Q96L46 248 aa3.6□□□□□ -1.83
HDAC2-208ENST00000520746 PIGMQ9H3S5 423 aa3.6□□□□□ -1.83
HDAC2-208ENST00000520746 RETREG1Q9H6L5 497 aa3.6□□□□□ -1.83
HDAC2-208ENST00000520746 GAREM1Q9H706 876 aa3.6□□□□□ -1.83
HDAC2-208ENST00000520746 PANK3Q9H999 370 aa3.6□□□□□ -1.83
HDAC2-208ENST00000520746 SETD4Q9NVD3 440 aa3.6□□□□□ -1.83
HDAC2-208ENST00000520746 MAP3K20Q9NYL2 800 aaKnown RBP3.6□□□□□ -1.83
HDAC2-208ENST00000520746 C1RLQ9NZP8 487 aa3.6□□□□□ -1.83
HDAC2-208ENST00000520746 SIX4Q9UIU6 781 aa3.6□□□□□ -1.83
HDAC2-208ENST00000520746 KNSTRNQ9Y448 316 aa3.6□□□□□ -1.83
HDAC2-208ENST00000520746 CNTNAP1P78357 1384 aa3.6□□□□□ -1.83
HDAC2-208ENST00000520746 LY75O60449 1722 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 QSER1Q2KHR3 1735 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 WDR90Q96KV7 1748 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 N4BP2Q86UW6 1770 aaPredicted RBP3.59□□□□□ -1.83
HDAC2-208ENST00000520746 SAA2-SAA4A0A096LPE2 208 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 A0A0G2JPF8 293 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 GOLGA6L9A6NEM1 432 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 A8MZ25 164 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 HNRNPCL3B7ZW38 293 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 GPC4O75487 556 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 GFPT2O94808 682 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 KCNK5O95279 499 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 RB1P06400 928 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 LINC00271P0C7V0 271 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 HNRNPCL4P0DMR1 293 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 HSPA8P11142 646 aaKnown RBP3.59□□□□□ -1.83
HDAC2-208ENST00000520746 DAOP14920 347 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 ANXA7P20073 488 aaKnown RBP3.59□□□□□ -1.83
HDAC2-208ENST00000520746 GARSP41250 739 aaKnown RBP3.59□□□□□ -1.83
HDAC2-208ENST00000520746 CAMPP49913 170 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 TAS2R38P59533 333 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 TAS2R40P59535 323 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 MRPS34P82930 218 aaKnown RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms