RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 GULP1Q9UBP9 304 aa17.49■□□□□ 0.39
SDC2-205ENST00000520233 DHRS7Q9Y394 339 aa17.49■□□□□ 0.39
SDC2-205ENST00000520233 LRP4O75096 1905 aa17.49■□□□□ 0.39
SDC2-205ENST00000520233 TLDC2A0PJX2 215 aa17.48■□□□□ 0.39
SDC2-205ENST00000520233 PRR19A6NJB7 356 aa17.48■□□□□ 0.39
SDC2-205ENST00000520233 SMIM23A6NLE4 172 aa17.48■□□□□ 0.39
SDC2-205ENST00000520233 LIN7AO14910 233 aaPredicted RBP17.48■□□□□ 0.39
SDC2-205ENST00000520233 SAT1P21673 171 aa17.48■□□□□ 0.39
SDC2-205ENST00000520233 CTBSQ01459 385 aa17.48■□□□□ 0.39
SDC2-205ENST00000520233 ILF3Q12906 894 aaKnown RBP eCLIP17.48■□□□□ 0.398e-7■■■□□ 15
SDC2-205ENST00000520233 DNAJC3Q13217 504 aa17.48■□□□□ 0.39
SDC2-205ENST00000520233 HLA-BQ31612 363 aa17.48■□□□□ 0.39
SDC2-205ENST00000520233 PLEKHS1Q5SXH7 462 aa17.48■□□□□ 0.39
SDC2-205ENST00000520233 OTOAQ7RTW8 1153 aa17.48■□□□□ 0.39
SDC2-205ENST00000520233 NRROSQ86YC3 692 aa17.48■□□□□ 0.39
SDC2-205ENST00000520233 FSTL5Q8N475 847 aaPredicted RBP17.48■□□□□ 0.39
SDC2-205ENST00000520233 CD200R1Q8TD46 325 aa17.48■□□□□ 0.39
SDC2-205ENST00000520233 GPBAR1Q8TDU6 330 aa17.48■□□□□ 0.39
SDC2-205ENST00000520233 GPR21Q99679 349 aa17.48■□□□□ 0.39
SDC2-205ENST00000520233 LRRC61Q9BV99 259 aa17.48■□□□□ 0.39
SDC2-205ENST00000520233 GSDMCQ9BYG8 508 aa17.48■□□□□ 0.39
SDC2-205ENST00000520233 SMOC1Q9H4F8 434 aa17.48■□□□□ 0.39
SDC2-205ENST00000520233 VIPAS39Q9H9C1 493 aa17.48■□□□□ 0.39
SDC2-205ENST00000520233 CAB39LQ9H9S4 337 aa17.48■□□□□ 0.39
SDC2-205ENST00000520233 SARS2Q9NP81 518 aaKnown RBP17.48■□□□□ 0.39
SDC2-205ENST00000520233 GALPQ9UBC7 116 aa17.48■□□□□ 0.39
SDC2-205ENST00000520233 SPASTQ9UBP0 616 aa17.48■□□□□ 0.39
SDC2-205ENST00000520233 CTNNAL1Q9UBT7 734 aa17.48■□□□□ 0.39
SDC2-205ENST00000520233 TBK1Q9UHD2 729 aa17.48■□□□□ 0.39
SDC2-205ENST00000520233 TRMT6Q9UJA5 497 aaKnown RBP17.48■□□□□ 0.39
SDC2-205ENST00000520233 PLEKHM1Q9Y4G2 1056 aa17.48■□□□□ 0.39
SDC2-205ENST00000520233 A0A1B0GTQ1 180 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 SLC5A10A0PJK1 596 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 TRIM49D1C9J1S8 452 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 PROB1E7EW31 1015 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 DYNC1I1O14576 645 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 YKT6O15498 198 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 LRP3O75074 770 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 PIAS2O75928 621 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 CER1O95813 267 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 APOA4P06727 396 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 STMN1P16949 149 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 SERPINB8P50452 374 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 PLOD1Q02809 727 aaPredicted RBP17.47■□□□□ 0.39
SDC2-205ENST00000520233 PDAP1Q13442 181 aaKnown RBP17.47■□□□□ 0.39
SDC2-205ENST00000520233 NFE2L1Q14494 772 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 TMED2Q15363 201 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 ELOCQ15369 112 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 SHBQ15464 509 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 ZKSCAN8Q15776 578 aaPredicted RBP17.47■□□□□ 0.39
SDC2-205ENST00000520233 TTLL9Q3SXZ7 439 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 KRT71Q3SY84 523 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 PRRT3Q5FWE3 981 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 CEP85LQ5SZL2 805 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 METRNLQ641Q3 311 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 XKR5Q6UX68 686 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 TIFABQ6ZNK6 161 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 PIM3Q86V86 326 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 CEP97Q8IW35 865 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 CFAP206Q8IYR0 622 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 SDR16C5Q8N3Y7 309 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 ZBTB2Q8N680 514 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 SIDT2Q8NBJ9 832 aaKnown RBP17.47■□□□□ 0.39
SDC2-205ENST00000520233 GIMAP7Q8NHV1 300 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 CCL4L1Q8NHW4 92 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 ASZ1Q8WWH4 475 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 INPP5DQ92835 1189 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 ISL2Q96A47 359 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 FAM136AQ96C01 138 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 SLC30A3Q99726 388 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 GAREM1Q9H706 876 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 CAAP1Q9H8G2 361 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 COG4Q9H9E3 785 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 NCDNQ9UBB6 729 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 LGALS13Q9UHV8 139 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 KCNK6Q9Y257 313 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 DNAJC16Q9Y2G8 782 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 ST14Q9Y5Y6 855 aa17.47■□□□□ 0.39
SDC2-205ENST00000520233 GPC4O75487 556 aa17.46■□□□□ 0.39
SDC2-205ENST00000520233 ALDOAP04075 364 aaKnown RBP17.46■□□□□ 0.39
SDC2-205ENST00000520233 ENGP17813 658 aa17.46■□□□□ 0.39
SDC2-205ENST00000520233 IDSP22304 550 aa17.46■□□□□ 0.39
SDC2-205ENST00000520233 AK4P27144 223 aaPredicted RBP17.46■□□□□ 0.39
SDC2-205ENST00000520233 CRABP2P29373 138 aa17.46■□□□□ 0.39
SDC2-205ENST00000520233 CSRP3P50461 194 aa17.46■□□□□ 0.39
SDC2-205ENST00000520233 RAB10P61026 200 aa17.46■□□□□ 0.39
SDC2-205ENST00000520233 RPA4Q13156 261 aa17.46■□□□□ 0.39
SDC2-205ENST00000520233 BOP1Q14137 746 aaKnown RBP17.46■□□□□ 0.39
SDC2-205ENST00000520233 GBX1Q14549 363 aa17.46■□□□□ 0.39
SDC2-205ENST00000520233 SYTL3Q4VX76 610 aa17.46■□□□□ 0.39
SDC2-205ENST00000520233 TCEAL6Q6IPX3 200 aa17.46■□□□□ 0.39
SDC2-205ENST00000520233 NAPRTQ6XQN6 538 aa17.46■□□□□ 0.39
SDC2-205ENST00000520233 FAM83HQ6ZRV2 1179 aaPredicted RBP17.46■□□□□ 0.39
SDC2-205ENST00000520233 ZNF548Q8NEK5 533 aaPredicted RBP17.46■□□□□ 0.39
SDC2-205ENST00000520233 LMX1AQ8TE12 382 aa17.46■□□□□ 0.39
SDC2-205ENST00000520233 MZB1Q8WU39 189 aa17.46■□□□□ 0.39
SDC2-205ENST00000520233 TCEAL3Q969E4 200 aa17.46■□□□□ 0.39
SDC2-205ENST00000520233 TMEM159Q96B96 161 aa17.46■□□□□ 0.39
SDC2-205ENST00000520233 RUFY1Q96T51 708 aa17.46■□□□□ 0.39
SDC2-205ENST00000520233 SYTL2Q9HCH5 934 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms