RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 EPHB2P29323 1055 aa7.15□□□□□ -1.26
SDCBP-208ENST00000520228 LHX1P48742 406 aa7.15□□□□□ -1.26
SDCBP-208ENST00000520228 MYL6P60660 151 aa7.15□□□□□ -1.26
SDCBP-208ENST00000520228 TNNC1P63316 161 aa7.15□□□□□ -1.26
SDCBP-208ENST00000520228 FKBP3Q00688 224 aaKnown RBP7.15□□□□□ -1.26
SDCBP-208ENST00000520228 MYL7Q01449 175 aa7.15□□□□□ -1.26
SDCBP-208ENST00000520228 LRRC63Q05C16 580 aa7.15□□□□□ -1.26
SDCBP-208ENST00000520228 SOWAHAQ2M3V2 549 aa7.15□□□□□ -1.26
SDCBP-208ENST00000520228 ANXA2RQ3ZCQ2 193 aa7.15□□□□□ -1.26
SDCBP-208ENST00000520228 SLC39A12Q504Y0 691 aa7.15□□□□□ -1.26
SDCBP-208ENST00000520228 COLEC12Q5KU26 742 aa7.15□□□□□ -1.26
SDCBP-208ENST00000520228 C1orf220Q5T0J3 134 aa7.15□□□□□ -1.26
SDCBP-208ENST00000520228 KLHL10Q6JEL2 608 aa7.15□□□□□ -1.26
SDCBP-208ENST00000520228 DHRS13Q6UX07 377 aa7.15□□□□□ -1.26
SDCBP-208ENST00000520228 ZNF354CQ86Y25 554 aa7.15□□□□□ -1.26
SDCBP-208ENST00000520228 UEVLDQ8IX04 471 aa7.15□□□□□ -1.26
SDCBP-208ENST00000520228 SRRM1Q8IYB3 904 aaKnown RBP7.15□□□□□ -1.26
SDCBP-208ENST00000520228 DCP1BQ8IZD4 617 aaKnown RBP7.15□□□□□ -1.26
SDCBP-208ENST00000520228 ADGRF2Q8IZF7 708 aa7.15□□□□□ -1.26
SDCBP-208ENST00000520228 PAQR4Q8N4S7 273 aaPredicted RBP7.15□□□□□ -1.26
SDCBP-208ENST00000520228 TDRD5Q8NAT2 981 aaKnown RBP7.15□□□□□ -1.26
SDCBP-208ENST00000520228 ATAD1Q8NBU5 361 aa7.15□□□□□ -1.26
SDCBP-208ENST00000520228 OR10T2Q8NGX3 314 aa7.15□□□□□ -1.26
SDCBP-208ENST00000520228 SPATA18Q8TC71 538 aa7.15□□□□□ -1.26
SDCBP-208ENST00000520228 BCAS4Q8TDM0 211 aa7.15□□□□□ -1.26
SDCBP-208ENST00000520228 WIPF2Q8TF74 440 aaPredicted RBP7.15□□□□□ -1.26
SDCBP-208ENST00000520228 PIGKQ92643 395 aa7.15□□□□□ -1.26
SDCBP-208ENST00000520228 SYAP1Q96A49 352 aaPredicted RBP7.15□□□□□ -1.26
SDCBP-208ENST00000520228 RTP3Q9BQQ7 232 aa7.15□□□□□ -1.26
SDCBP-208ENST00000520228 ACBD6Q9BR61 282 aa7.15□□□□□ -1.26
SDCBP-208ENST00000520228 ABHD14AQ9BUJ0 271 aa7.15□□□□□ -1.26
SDCBP-208ENST00000520228 CLSTN2Q9H4D0 955 aa7.15□□□□□ -1.26
SDCBP-208ENST00000520228 DDX43Q9NXZ2 648 aaKnown RBP7.15□□□□□ -1.26
SDCBP-208ENST00000520228 KLHL13Q9P2N7 655 aa7.15□□□□□ -1.26
SDCBP-208ENST00000520228 INSL5Q9Y5Q6 135 aa7.15□□□□□ -1.26
SDCBP-208ENST00000520228 CLUHO75153 1309 aa7.15□□□□□ -1.26
SDCBP-208ENST00000520228 SLC22A23A1A5C7 686 aa7.14□□□□□ -1.27
SDCBP-208ENST00000520228 BICDL2A1A5D9 508 aa7.14□□□□□ -1.27
SDCBP-208ENST00000520228 MTMR11A4FU01 709 aa7.14□□□□□ -1.27
SDCBP-208ENST00000520228 TRIM49BA6NDI0 452 aa7.14□□□□□ -1.27
SDCBP-208ENST00000520228 C2CD4DB7Z1M9 353 aa7.14□□□□□ -1.27
SDCBP-208ENST00000520228 TP73O15350 636 aa7.14□□□□□ -1.27
SDCBP-208ENST00000520228 STX10O60499 249 aa7.14□□□□□ -1.27
SDCBP-208ENST00000520228 VNN2O95498 520 aa7.14□□□□□ -1.27
SDCBP-208ENST00000520228 TRIM49P0CI25 452 aa7.14□□□□□ -1.27
SDCBP-208ENST00000520228 TRIM49CP0CI26 452 aa7.14□□□□□ -1.27
SDCBP-208ENST00000520228 ACP5P13686 325 aa7.14□□□□□ -1.27
SDCBP-208ENST00000520228 ATP5F1P24539 256 aaPredicted RBP7.14□□□□□ -1.27
SDCBP-208ENST00000520228 ACAT1P24752 427 aaKnown RBP7.14□□□□□ -1.27
SDCBP-208ENST00000520228 GTF2H1P32780 548 aa7.14□□□□□ -1.27
SDCBP-208ENST00000520228 GNL1P36915 607 aaPredicted RBP7.14□□□□□ -1.27
SDCBP-208ENST00000520228 GCLMP48507 274 aa7.14□□□□□ -1.27
SDCBP-208ENST00000520228 TUFMP49411 452 aaKnown RBP7.14□□□□□ -1.27
SDCBP-208ENST00000520228 ADPRHP54922 357 aa7.14□□□□□ -1.27
SDCBP-208ENST00000520228 C21orf58P58505 322 aa7.14□□□□□ -1.27
SDCBP-208ENST00000520228 NTHL1P78549 312 aa7.14□□□□□ -1.27
SDCBP-208ENST00000520228 B4GALNT1Q00973 533 aa7.14□□□□□ -1.27
SDCBP-208ENST00000520228 TSPY1Q01534 308 aa7.14□□□□□ -1.27
SDCBP-208ENST00000520228 CDK18Q07002 472 aa7.14□□□□□ -1.27
SDCBP-208ENST00000520228 ENPEPQ07075 957 aa7.14□□□□□ -1.27
SDCBP-208ENST00000520228 TWF1Q12792 350 aa7.14□□□□□ -1.27
SDCBP-208ENST00000520228 SMARCB1Q12824 385 aa7.14□□□□□ -1.27
SDCBP-208ENST00000520228 MTA1Q13330 715 aa7.14□□□□□ -1.27
SDCBP-208ENST00000520228 PLD1Q13393 1074 aa7.14□□□□□ -1.27
SDCBP-208ENST00000520228 SGSM1Q2NKQ1 1148 aa7.14□□□□□ -1.27
SDCBP-208ENST00000520228 ZNF699Q32M78 642 aa7.14□□□□□ -1.27
SDCBP-208ENST00000520228 MDGA2Q7Z553 956 aa7.14□□□□□ -1.27
SDCBP-208ENST00000520228 NLRC5Q86WI3 1866 aa7.14□□□□□ -1.27
SDCBP-208ENST00000520228 ELMOD1Q8N336 334 aa7.14□□□□□ -1.27
SDCBP-208ENST00000520228 ENDOVQ8N8Q3 282 aaKnown RBP7.14□□□□□ -1.27
SDCBP-208ENST00000520228 TRIML1Q8N9V2 468 aa7.14□□□□□ -1.27
SDCBP-208ENST00000520228 C2orf15Q8WU43 125 aaKnown RBP7.14□□□□□ -1.27
SDCBP-208ENST00000520228 NELFBQ8WX92 580 aa7.14□□□□□ -1.27
SDCBP-208ENST00000520228 TAF4BQ92750 862 aa7.14□□□□□ -1.27
SDCBP-208ENST00000520228 UBXN10Q96LJ8 280 aa7.14□□□□□ -1.27
SDCBP-208ENST00000520228 SEPT5Q99719 369 aaPredicted RBP7.14□□□□□ -1.27
SDCBP-208ENST00000520228 FAM118BQ9BPY3 351 aa7.14□□□□□ -1.27
SDCBP-208ENST00000520228 KIAA1671Q9BY89 1806 aa7.14□□□□□ -1.27
SDCBP-208ENST00000520228 SNX25Q9H3E2 840 aa7.14□□□□□ -1.27
SDCBP-208ENST00000520228 PLXNA4Q9HCM2 1894 aa7.14□□□□□ -1.27
SDCBP-208ENST00000520228 HCFC1R1Q9NWW0 138 aa7.14□□□□□ -1.27
SDCBP-208ENST00000520228 YIPF1Q9Y548 306 aa7.14□□□□□ -1.27
SDCBP-208ENST00000520228 EIF3FO00303 357 aaPredicted RBP7.13□□□□□ -1.27
SDCBP-208ENST00000520228 DSCR3O14972 297 aa7.13□□□□□ -1.27
SDCBP-208ENST00000520228 DCXO43602 365 aa7.13□□□□□ -1.27
SDCBP-208ENST00000520228 CREB3O43889 395 aa7.13□□□□□ -1.27
SDCBP-208ENST00000520228 TACC1O75410 805 aa7.13□□□□□ -1.27
SDCBP-208ENST00000520228 HLA-DRAP01903 254 aa7.13□□□□□ -1.27
SDCBP-208ENST00000520228 CSF1P09603 554 aa7.13□□□□□ -1.27
SDCBP-208ENST00000520228 CKMT1AP12532 417 aa7.13□□□□□ -1.27
SDCBP-208ENST00000520228 P4HA1P13674 534 aa7.13□□□□□ -1.27
SDCBP-208ENST00000520228 PTPN2P17706 415 aa7.13□□□□□ -1.27
SDCBP-208ENST00000520228 WARSP23381 471 aaKnown RBP7.13□□□□□ -1.27
SDCBP-208ENST00000520228 PRPH2P23942 346 aa7.13□□□□□ -1.27
SDCBP-208ENST00000520228 LMO2P25791 158 aa7.13□□□□□ -1.27
SDCBP-208ENST00000520228 PIK3CAP42336 1068 aa7.13□□□□□ -1.27
SDCBP-208ENST00000520228 PAPOLAP51003 745 aaKnown RBP7.13□□□□□ -1.27
SDCBP-208ENST00000520228 STX17P56962 302 aa7.13□□□□□ -1.27
SDCBP-208ENST00000520228 SSBP2P81877 361 aaPredicted RBP7.13□□□□□ -1.27
SDCBP-208ENST00000520228 ZNF667Q5HYK9 610 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms