RNA–Protein interactions for RNA: ENST00000520058.1

SREK1-207, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-207ENST00000520058 MRNIPQ6NTE8 343 aa18.05■□□□□ 0.48
SREK1-207ENST00000520058 TMEM71Q6P5X7 295 aa18.05■□□□□ 0.48
SREK1-207ENST00000520058 WDR74Q6RFH5 385 aaPredicted RBP18.05■□□□□ 0.48
SREK1-207ENST00000520058 SDCCAG8Q86SQ7 713 aaPredicted RBP18.05■□□□□ 0.48
SREK1-207ENST00000520058 PROSER1Q86XN7 944 aa18.05■□□□□ 0.48
SREK1-207ENST00000520058 KLHL7Q8IXQ5 586 aa18.05■□□□□ 0.48
SREK1-207ENST00000520058 MPP5Q8N3R9 675 aa18.05■□□□□ 0.48
SREK1-207ENST00000520058 OR4D9Q8NGE8 314 aa18.05■□□□□ 0.48
SREK1-207ENST00000520058 ZFPM2Q8WW38 1151 aa18.05■□□□□ 0.48
SREK1-207ENST00000520058 RDH14Q9HBH5 336 aa18.05■□□□□ 0.48
SREK1-207ENST00000520058 THSD1Q9NS62 852 aa18.05■□□□□ 0.48
SREK1-207ENST00000520058 SYBUQ9NX95 663 aa18.05■□□□□ 0.48
SREK1-207ENST00000520058 FAM8A1Q9UBU6 413 aa18.05■□□□□ 0.48
SREK1-207ENST00000520058 SLC2A6Q9UGQ3 507 aa18.05■□□□□ 0.48
SREK1-207ENST00000520058 ZMIZ1Q9ULJ6 1067 aa18.05■□□□□ 0.48
SREK1-207ENST00000520058 SOX13Q9UN79 622 aa18.05■□□□□ 0.48
SREK1-207ENST00000520058 PSMD13Q9UNM6 376 aa18.05■□□□□ 0.48
SREK1-207ENST00000520058 NEU2Q9Y3R4 380 aa18.05■□□□□ 0.48
SREK1-207ENST00000520058 PCDHGA8Q9Y5G5 932 aa18.05■□□□□ 0.48
SREK1-207ENST00000520058 SPEGQ15772 3267 aa18.05■□□□□ 0.48
SREK1-207ENST00000520058 ACACAQ13085 2346 aa18.05■□□□□ 0.48
SREK1-207ENST00000520058 TCRBV7S3A2A0A539 114 aa18.04■□□□□ 0.48
SREK1-207ENST00000520058 OR51F1A6NGY5 319 aa18.04■□□□□ 0.48
SREK1-207ENST00000520058 PRR19A6NJB7 356 aa18.04■□□□□ 0.48
SREK1-207ENST00000520058 HGSO14964 777 aaPredicted RBP18.04■□□□□ 0.48
SREK1-207ENST00000520058 CD3EAPO15446 510 aaKnown RBP18.04■□□□□ 0.48
SREK1-207ENST00000520058 POLBP06746 335 aa18.04■□□□□ 0.48
SREK1-207ENST00000520058 NDUFS1P28331 727 aa18.04■□□□□ 0.48
SREK1-207ENST00000520058 SLC19A1P41440 591 aa18.04■□□□□ 0.48
SREK1-207ENST00000520058 LIMK2P53671 638 aa18.04■□□□□ 0.48
SREK1-207ENST00000520058 CRADDP78560 199 aa18.04■□□□□ 0.48
SREK1-207ENST00000520058 ZFP36L1Q07352 338 aaKnown RBP18.04■□□□□ 0.48
SREK1-207ENST00000520058 RPA4Q13156 261 aa18.04■□□□□ 0.48
SREK1-207ENST00000520058 HOOK3Q86VS8 718 aa18.04■□□□□ 0.48
SREK1-207ENST00000520058 ZNF761Q86XN6 746 aaPredicted RBP18.04■□□□□ 0.48
SREK1-207ENST00000520058 PLXDC1Q8IUK5 500 aa18.04■□□□□ 0.48
SREK1-207ENST00000520058 PIANPQ8IYJ0 282 aa18.04■□□□□ 0.48
SREK1-207ENST00000520058 FBXO39Q8N4B4 442 aa18.04■□□□□ 0.48
SREK1-207ENST00000520058 GABPB2Q8TAK5 448 aaPredicted RBP18.04■□□□□ 0.48
SREK1-207ENST00000520058 NCSTNQ92542 709 aa18.04■□□□□ 0.48
SREK1-207ENST00000520058 ZNF778Q96MU6 729 aa18.04■□□□□ 0.48
SREK1-207ENST00000520058 ZNF578Q96N58 590 aaPredicted RBP18.04■□□□□ 0.48
SREK1-207ENST00000520058 SLC40A1Q9NP59 571 aa18.04■□□□□ 0.48
SREK1-207ENST00000520058 TREX1Q9NSU2 369 aa18.04■□□□□ 0.48
SREK1-207ENST00000520058 SCHIP1Q9P0W5 487 aaPredicted RBP18.04■□□□□ 0.48
SREK1-207ENST00000520058 ZNF624Q9P2J8 865 aaPredicted RBP18.04■□□□□ 0.48
SREK1-207ENST00000520058 OR52A4PA6NMU1 304 aa18.03■□□□□ 0.48
SREK1-207ENST00000520058 GOLGA8MH3BSY2 632 aa18.03■□□□□ 0.48
SREK1-207ENST00000520058 LIN7AO14910 233 aaPredicted RBP18.03■□□□□ 0.48
SREK1-207ENST00000520058 PLD2O14939 933 aa18.03■□□□□ 0.48
SREK1-207ENST00000520058 BRINP1O60477 761 aa18.03■□□□□ 0.48
SREK1-207ENST00000520058 NDUFS3O75489 264 aa18.03■□□□□ 0.48
SREK1-207ENST00000520058 BRAFP15056 766 aa18.03■□□□□ 0.48
SREK1-207ENST00000520058 ERVPABLB-1P60509 514 aa18.03■□□□□ 0.48
SREK1-207ENST00000520058 DHX34Q14147 1143 aaKnown RBP18.03■□□□□ 0.48
SREK1-207ENST00000520058 CLCA4Q14CN2 919 aa18.03■□□□□ 0.48
SREK1-207ENST00000520058 PLCL1Q15111 1095 aa18.03■□□□□ 0.48
SREK1-207ENST00000520058 RPE65Q16518 533 aa18.03■□□□□ 0.48
SREK1-207ENST00000520058 SYTL3Q4VX76 610 aa18.03■□□□□ 0.48
SREK1-207ENST00000520058 RNF187Q5TA31 235 aaPredicted RBP18.03■□□□□ 0.48
SREK1-207ENST00000520058 TMEM164Q5U3C3 297 aa18.03■□□□□ 0.48
SREK1-207ENST00000520058 NKAIN2Q5VXU1 208 aa18.03■□□□□ 0.48
SREK1-207ENST00000520058 IGF2-ASQ6U949 168 aa18.03■□□□□ 0.48
SREK1-207ENST00000520058 ZNF534Q76KX8 674 aa18.03■□□□□ 0.48
SREK1-207ENST00000520058 CLDN19Q8N6F1 224 aa18.03■□□□□ 0.48
SREK1-207ENST00000520058 FGF11Q92914 225 aa18.03■□□□□ 0.48
SREK1-207ENST00000520058 TRIM44Q96DX7 344 aaPredicted RBP18.03■□□□□ 0.48
SREK1-207ENST00000520058 C12orf66Q96MD2 445 aa18.03■□□□□ 0.48
SREK1-207ENST00000520058 SERPINB12Q96P63 405 aa18.03■□□□□ 0.48
SREK1-207ENST00000520058 WWP1Q9H0M0 922 aa18.03■□□□□ 0.48
SREK1-207ENST00000520058 IMP3Q9NV31 184 aaKnown RBP18.03■□□□□ 0.48
SREK1-207ENST00000520058 VPS9D1Q9Y2B5 631 aa18.03■□□□□ 0.48
SREK1-207ENST00000520058 WDR37Q9Y2I8 494 aa18.03■□□□□ 0.48
SREK1-207ENST00000520058 FAM237BA0A1B0GVD1 139 aa18.02■□□□□ 0.48
SREK1-207ENST00000520058 DNALI1O14645 258 aaPredicted RBP18.02■□□□□ 0.48
SREK1-207ENST00000520058 RRP8O43159 456 aaKnown RBP18.02■□□□□ 0.48
SREK1-207ENST00000520058 DXOO77932 396 aaKnown RBP18.02■□□□□ 0.48
SREK1-207ENST00000520058 UBXN7O94888 489 aa18.02■□□□□ 0.48
SREK1-207ENST00000520058 VAPBO95292 243 aa18.02■□□□□ 0.48
SREK1-207ENST00000520058 PRSS56P0CW18 603 aa18.02■□□□□ 0.48
SREK1-207ENST00000520058 MTHFD1P11586 935 aaKnown RBP18.02■□□□□ 0.48
SREK1-207ENST00000520058 NMBRP28336 390 aa18.02■□□□□ 0.48
SREK1-207ENST00000520058 CSTF2P33240 577 aaKnown RBP eCLIP18.02■□□□□ 0.48
SREK1-207ENST00000520058 PDX1P52945 283 aa18.02■□□□□ 0.48
SREK1-207ENST00000520058 ANKRD22Q5VYY1 191 aa18.02■□□□□ 0.48
SREK1-207ENST00000520058 SYT10Q6XYQ8 523 aa18.02■□□□□ 0.48
SREK1-207ENST00000520058 LRRC69Q6ZNQ3 347 aa18.02■□□□□ 0.48
SREK1-207ENST00000520058 FAM83HQ6ZRV2 1179 aaPredicted RBP18.02■□□□□ 0.48
SREK1-207ENST00000520058 B3GNT8Q7Z7M8 397 aa18.02■□□□□ 0.48
SREK1-207ENST00000520058 CAND1Q86VP6 1230 aaKnown RBP18.02■□□□□ 0.48
SREK1-207ENST00000520058 LRRC6Q86X45 466 aa18.02■□□□□ 0.48
SREK1-207ENST00000520058 SLITRK4Q8IW52 837 aa18.02■□□□□ 0.48
SREK1-207ENST00000520058 NAT8LQ8N9F0 302 aa18.02■□□□□ 0.48
SREK1-207ENST00000520058 ELMO1Q92556 727 aa18.02■□□□□ 0.48
SREK1-207ENST00000520058 MFSD3Q96ES6 412 aa18.02■□□□□ 0.48
SREK1-207ENST00000520058 CCDC97Q96F63 343 aaPredicted RBP18.02■□□□□ 0.48
SREK1-207ENST00000520058 PANX3Q96QZ0 392 aa18.02■□□□□ 0.48
SREK1-207ENST00000520058 NUDT22Q9BRQ3 303 aa18.02■□□□□ 0.48
SREK1-207ENST00000520058 COG4Q9H9E3 785 aa18.02■□□□□ 0.48
SREK1-207ENST00000520058 LOXL2Q9Y4K0 774 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms