RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.17□□□□□ -0.46
CSMD1-205ENST00000519623 ANKRD20A2Q5SQ80 823 aa12.17□□□□□ -0.46
CSMD1-205ENST00000519623 FNBP1LQ5T0N5 605 aa12.17□□□□□ -0.46
CSMD1-205ENST00000519623 ATP1A1-AS1Q5TC04 95 aa12.17□□□□□ -0.46
CSMD1-205ENST00000519623 ANKRD20A1Q5TYW2 823 aa12.17□□□□□ -0.46
CSMD1-205ENST00000519623 ANKRD20A3Q5VUR7 823 aa12.17□□□□□ -0.46
CSMD1-205ENST00000519623 PTRH1Q86Y79 214 aaKnown RBP12.17□□□□□ -0.46
CSMD1-205ENST00000519623 OR4K2Q8NGD2 314 aa12.17□□□□□ -0.46
CSMD1-205ENST00000519623 NAT14Q8WUY8 206 aa12.17□□□□□ -0.46
CSMD1-205ENST00000519623 SLC41A2Q96JW4 573 aa12.17□□□□□ -0.46
CSMD1-205ENST00000519623 ZNF514Q96K75 400 aaPredicted RBP12.17□□□□□ -0.46
CSMD1-205ENST00000519623 INSM2Q96T92 566 aaPredicted RBP12.17□□□□□ -0.46
CSMD1-205ENST00000519623 APOL2Q9BQE5 337 aa12.17□□□□□ -0.46
CSMD1-205ENST00000519623 FSD1LQ9BXM9 530 aa12.17□□□□□ -0.46
CSMD1-205ENST00000519623 OSBPL8Q9BZF1 889 aa12.17□□□□□ -0.46
CSMD1-205ENST00000519623 FLNCQ14315 2725 aa12.17□□□□□ -0.46
CSMD1-205ENST00000519623 MGAT4DA6NG13 374 aa12.16□□□□□ -0.46
CSMD1-205ENST00000519623 SOWAHDA6NJG2 315 aa12.16□□□□□ -0.46
CSMD1-205ENST00000519623 C2orf81A6NN90 581 aa12.16□□□□□ -0.46
CSMD1-205ENST00000519623 SRP72O76094 671 aaKnown RBP12.16□□□□□ -0.46
CSMD1-205ENST00000519623 TIAF1O95411 115 aa12.16□□□□□ -0.46
CSMD1-205ENST00000519623 PRAMEF1O95521 474 aa12.16□□□□□ -0.46
CSMD1-205ENST00000519623 RBP3P10745 1247 aa12.16□□□□□ -0.46
CSMD1-205ENST00000519623 MTHFD1P11586 935 aaKnown RBP12.16□□□□□ -0.46
CSMD1-205ENST00000519623 FOLR1P15328 257 aa12.16□□□□□ -0.46
CSMD1-205ENST00000519623 PSMB4P28070 264 aa12.16□□□□□ -0.46
CSMD1-205ENST00000519623 PTPN7P35236 360 aa12.16□□□□□ -0.46
CSMD1-205ENST00000519623 CYLC1P35663 651 aaPredicted RBP12.16□□□□□ -0.46
CSMD1-205ENST00000519623 DLSTP36957 453 aa12.16□□□□□ -0.46
CSMD1-205ENST00000519623 LONRF2Q1L5Z9 754 aa12.16□□□□□ -0.46
CSMD1-205ENST00000519623 ITPRIPL1Q6GPH6 555 aa12.16□□□□□ -0.46
CSMD1-205ENST00000519623 DENND5AQ6IQ26 1287 aa12.16□□□□□ -0.46
CSMD1-205ENST00000519623 AADACL2Q6P093 401 aa12.16□□□□□ -0.46
CSMD1-205ENST00000519623 C16orf46Q6P387 395 aa12.16□□□□□ -0.46
CSMD1-205ENST00000519623 DET1Q7L5Y6 550 aa12.16□□□□□ -0.46
CSMD1-205ENST00000519623 RASGRP3Q8IV61 690 aa12.16□□□□□ -0.46
CSMD1-205ENST00000519623 OR2L2Q8NH16 312 aa12.16□□□□□ -0.46
CSMD1-205ENST00000519623 APOBEC4Q8WW27 367 aaKnown RBP12.16□□□□□ -0.46
CSMD1-205ENST00000519623 ZFPM2Q8WW38 1151 aa12.16□□□□□ -0.46
CSMD1-205ENST00000519623 UBXN4Q92575 508 aa12.16□□□□□ -0.46
CSMD1-205ENST00000519623 CALR3Q96L12 384 aaKnown RBP12.16□□□□□ -0.46
CSMD1-205ENST00000519623 LINC00615Q96LM1 132 aaPredicted RBP12.16□□□□□ -0.46
CSMD1-205ENST00000519623 PANX2Q96RD6 677 aa12.16□□□□□ -0.46
CSMD1-205ENST00000519623 MAP3K3Q99759 626 aa12.16□□□□□ -0.46
CSMD1-205ENST00000519623 FAM118BQ9BPY3 351 aa12.16□□□□□ -0.46
CSMD1-205ENST00000519623 WWP1Q9H0M0 922 aa12.16□□□□□ -0.46
CSMD1-205ENST00000519623 ASB8Q9H765 288 aa12.16□□□□□ -0.46
CSMD1-205ENST00000519623 FKBPLQ9UIM3 349 aa12.16□□□□□ -0.46
CSMD1-205ENST00000519623 CROTQ9UKG9 612 aa12.16□□□□□ -0.46
CSMD1-205ENST00000519623 ACSL5Q9ULC5 683 aa12.16□□□□□ -0.46
CSMD1-205ENST00000519623 AAR2Q9Y312 384 aaKnown RBP12.16□□□□□ -0.46
CSMD1-205ENST00000519623 REXO2Q9Y3B8 237 aaKnown RBP12.16□□□□□ -0.46
CSMD1-205ENST00000519623 CFAP20Q9Y6A4 193 aaKnown RBP12.16□□□□□ -0.46
CSMD1-205ENST00000519623 BTNL10A8MVZ5 291 aa12.15□□□□□ -0.46
CSMD1-205ENST00000519623 PJA2O43164 708 aa12.15□□□□□ -0.46
CSMD1-205ENST00000519623 FURINP09958 794 aa12.15□□□□□ -0.46
CSMD1-205ENST00000519623 PYGMP11217 842 aa12.15□□□□□ -0.46
CSMD1-205ENST00000519623 SPTBP11277 2137 aa12.15□□□□□ -0.46
CSMD1-205ENST00000519623 CTNNA2P26232 953 aa12.15□□□□□ -0.46
CSMD1-205ENST00000519623 PBLDP30039 288 aaPredicted RBP12.15□□□□□ -0.46
CSMD1-205ENST00000519623 AKT1P31749 480 aa12.15□□□□□ -0.46
CSMD1-205ENST00000519623 EIF3EP60228 445 aaKnown RBP12.15□□□□□ -0.46
CSMD1-205ENST00000519623 TLE1Q04724 770 aa12.15□□□□□ -0.46
CSMD1-205ENST00000519623 KCNAB1Q14722 419 aa12.15□□□□□ -0.46
CSMD1-205ENST00000519623 SKIDA1Q1XH10 827 aa12.15□□□□□ -0.46
CSMD1-205ENST00000519623 BCL7AQ4VC05 210 aa12.15□□□□□ -0.46
CSMD1-205ENST00000519623 CCDC181Q5TID7 509 aa12.15□□□□□ -0.46
CSMD1-205ENST00000519623 CAPRIN2Q6IMN6 1127 aaKnown RBP12.15□□□□□ -0.46
CSMD1-205ENST00000519623 PWWP2BQ6NUJ5 590 aa12.15□□□□□ -0.46
CSMD1-205ENST00000519623 KLHL35Q6PF15 583 aa12.15□□□□□ -0.46
CSMD1-205ENST00000519623 DARS2Q6PI48 645 aaKnown RBP12.15□□□□□ -0.46
CSMD1-205ENST00000519623 CERS6Q6ZMG9 384 aa12.15□□□□□ -0.46
CSMD1-205ENST00000519623 PPP1R3BQ86XI6 285 aa12.15□□□□□ -0.46
CSMD1-205ENST00000519623 TMTC1Q8IUR5 882 aa12.15□□□□□ -0.46
CSMD1-205ENST00000519623 KLHDC8BQ8IXV7 354 aa12.15□□□□□ -0.46
CSMD1-205ENST00000519623 LRRC57Q8N9N7 239 aa12.15□□□□□ -0.46
CSMD1-205ENST00000519623 SPDYE1Q8NFV5 336 aaPredicted RBP12.15□□□□□ -0.46
CSMD1-205ENST00000519623 OR13C4Q8NGS5 318 aa12.15□□□□□ -0.46
CSMD1-205ENST00000519623 CCDC110Q8TBZ0 833 aa12.15□□□□□ -0.46
CSMD1-205ENST00000519623 ALG3Q92685 438 aa12.15□□□□□ -0.46
CSMD1-205ENST00000519623 STAMBPL1Q96FJ0 436 aa12.15□□□□□ -0.46
CSMD1-205ENST00000519623 ABHD17AQ96GS6 310 aa12.15□□□□□ -0.46
CSMD1-205ENST00000519623 FCRL4Q96PJ5 515 aa12.15□□□□□ -0.46
CSMD1-205ENST00000519623 LACRTQ9GZZ8 138 aa12.15□□□□□ -0.46
CSMD1-205ENST00000519623 AKIRIN1Q9H9L7 192 aaPredicted RBP12.15□□□□□ -0.46
CSMD1-205ENST00000519623 ARNT2Q9HBZ2 717 aa12.15□□□□□ -0.46
CSMD1-205ENST00000519623 LUC7LQ9NQ29 371 aaKnown RBP12.15□□□□□ -0.46
CSMD1-205ENST00000519623 ZNF71Q9NQZ8 489 aaPredicted RBP12.15□□□□□ -0.46
CSMD1-205ENST00000519623 IMP3Q9NV31 184 aaKnown RBP12.15□□□□□ -0.46
CSMD1-205ENST00000519623 HRASLS2Q9NWW9 162 aa12.15□□□□□ -0.46
CSMD1-205ENST00000519623 PADI1Q9ULC6 663 aa12.15□□□□□ -0.46
CSMD1-205ENST00000519623 PCDHGA6Q9Y5G7 932 aa12.15□□□□□ -0.46
CSMD1-205ENST00000519623 KCNMB2Q9Y691 235 aa12.15□□□□□ -0.46
CSMD1-205ENST00000519623 SEC16AO15027 2179 aa12.15□□□□□ -0.47
CSMD1-205ENST00000519623 CCDC66A2RUB6 948 aa12.14□□□□□ -0.47
CSMD1-205ENST00000519623 KLHL33A6NCF5 533 aa12.14□□□□□ -0.47
CSMD1-205ENST00000519623 OR5K3A6NET4 321 aa12.14□□□□□ -0.47
CSMD1-205ENST00000519623 KCNN4O15554 427 aa12.14□□□□□ -0.47
CSMD1-205ENST00000519623 LDB2O43679 373 aa12.14□□□□□ -0.47
CSMD1-205ENST00000519623 RECKO95980 971 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms