RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 EML2O95834 649 aa22.17■■□□□ 1.14
SKP1-206ENST00000519321 XRCC1P18887 633 aaPredicted RBP22.17■■□□□ 1.14
SKP1-206ENST00000519321 RPL10P27635 214 aaKnown RBP22.17■■□□□ 1.14
SKP1-206ENST00000519321 GPR3P46089 330 aa22.17■■□□□ 1.14
SKP1-206ENST00000519321 ADARP55265 1226 aaKnown RBP22.17■■□□□ 1.14
SKP1-206ENST00000519321 PLOD1Q02809 727 aaPredicted RBP22.17■■□□□ 1.14
SKP1-206ENST00000519321 GUCY2DQ02846 1103 aa22.17■■□□□ 1.14
SKP1-206ENST00000519321 RPA4Q13156 261 aa22.17■■□□□ 1.14
SKP1-206ENST00000519321 SEPT7Q16181 437 aaKnown RBP22.17■■□□□ 1.14
SKP1-206ENST00000519321 PERM1Q5SV97 790 aa22.17■■□□□ 1.14
SKP1-206ENST00000519321 DHRS13Q6UX07 377 aa22.17■■□□□ 1.14
SKP1-206ENST00000519321 ZNF438Q7Z4V0 828 aa22.17■■□□□ 1.14
SKP1-206ENST00000519321 RAB44Q7Z6P3 723 aaPredicted RBP22.17■■□□□ 1.14
SKP1-206ENST00000519321 KCNMB4Q86W47 210 aa22.17■■□□□ 1.14
SKP1-206ENST00000519321 SFTPA2Q8IWL1 248 aa22.17■■□□□ 1.14
SKP1-206ENST00000519321 CFAP206Q8IYR0 622 aa22.17■■□□□ 1.14
SKP1-206ENST00000519321 GALNT15Q8N3T1 639 aa22.17■■□□□ 1.14
SKP1-206ENST00000519321 CCDC3Q9BQI4 270 aa22.17■■□□□ 1.14
SKP1-206ENST00000519321 PCDHB1Q9Y5F3 818 aa22.17■■□□□ 1.14
SKP1-206ENST00000519321 UBA6A0AVT1 1052 aaPredicted RBP22.16■■□□□ 1.14
SKP1-206ENST00000519321 ESPNB1AK53 854 aa22.16■■□□□ 1.14
SKP1-206ENST00000519321 LIN7AO14910 233 aaPredicted RBP22.16■■□□□ 1.14
SKP1-206ENST00000519321 HHEXQ03014 270 aa22.16■■□□□ 1.14
SKP1-206ENST00000519321 NR1D2Q14995 579 aa22.16■■□□□ 1.14
SKP1-206ENST00000519321 STEAP4Q687X5 459 aa22.16■■□□□ 1.14
SKP1-206ENST00000519321 ZNF470Q6ECI4 717 aa22.16■■□□□ 1.14
SKP1-206ENST00000519321 PTRHD1Q6GMV3 140 aaKnown RBP22.16■■□□□ 1.14
SKP1-206ENST00000519321 UNC5AQ6ZN44 842 aa22.16■■□□□ 1.14
SKP1-206ENST00000519321 FAM83HQ6ZRV2 1179 aaPredicted RBP22.16■■□□□ 1.14
SKP1-206ENST00000519321 IGDCC3Q8IVU1 814 aa22.16■■□□□ 1.14
SKP1-206ENST00000519321 ZBED8Q8IZ13 594 aa22.16■■□□□ 1.14
SKP1-206ENST00000519321 FBXO36Q8NEA4 188 aa22.16■■□□□ 1.14
SKP1-206ENST00000519321 FBXO25Q8TCJ0 367 aa22.16■■□□□ 1.14
SKP1-206ENST00000519321 NAT14Q8WUY8 206 aa22.16■■□□□ 1.14
SKP1-206ENST00000519321 CFAP36Q96G28 342 aa22.16■■□□□ 1.14
SKP1-206ENST00000519321 PANX3Q96QZ0 392 aa22.16■■□□□ 1.14
SKP1-206ENST00000519321 LDHAL6BQ9BYZ2 381 aaPredicted RBP22.16■■□□□ 1.14
SKP1-206ENST00000519321 COG4Q9H9E3 785 aa22.16■■□□□ 1.14
SKP1-206ENST00000519321 L2HGDHQ9H9P8 463 aa22.16■■□□□ 1.14
SKP1-206ENST00000519321 CPNE7Q9UBL6 633 aa22.16■■□□□ 1.14
SKP1-206ENST00000519321 TRBV23OR9-2A0A075B6M9 112 aa22.15■■□□□ 1.14
SKP1-206ENST00000519321 H3BMM5 538 aa22.15■■□□□ 1.14
SKP1-206ENST00000519321 OPA1O60313 960 aa22.15■■□□□ 1.14
SKP1-206ENST00000519321 VIPP01282 170 aa22.15■■□□□ 1.14
SKP1-206ENST00000519321 SLC35G4P0C7Q5 338 aa22.15■■□□□ 1.14
SKP1-206ENST00000519321 FOXC1Q12948 553 aa22.15■■□□□ 1.14
SKP1-206ENST00000519321 FRG1Q14331 258 aaKnown RBP22.15■■□□□ 1.14
SKP1-206ENST00000519321 SMAD1Q15797 465 aaKnown RBP22.15■■□□□ 1.14
SKP1-206ENST00000519321 HSP90AA5PQ58FG0 334 aa22.15■■□□□ 1.14
SKP1-206ENST00000519321 HP1BP3Q5SSJ5 553 aaPredicted RBP22.15■■□□□ 1.14
SKP1-206ENST00000519321 CHCHD2P9Q5T1J5 151 aaPredicted RBP22.15■■□□□ 1.14
SKP1-206ENST00000519321 CEP128Q6ZU80 1094 aa22.15■■□□□ 1.14
SKP1-206ENST00000519321 TMPRSS12Q86WS5 348 aa22.15■■□□□ 1.14
SKP1-206ENST00000519321 TRIM48Q8IWZ4 208 aa22.15■■□□□ 1.14
SKP1-206ENST00000519321 RBM12BQ8IXT5 1001 aaKnown RBP22.15■■□□□ 1.14
SKP1-206ENST00000519321 PYROXD1Q8WU10 500 aa22.15■■□□□ 1.14
SKP1-206ENST00000519321 ELMO1Q92556 727 aa22.15■■□□□ 1.14
SKP1-206ENST00000519321 CERS2Q96G23 380 aa22.15■■□□□ 1.14
SKP1-206ENST00000519321 P2RY12Q9H244 342 aa22.15■■□□□ 1.14
SKP1-206ENST00000519321 EPB41L5Q9HCM4 733 aa22.15■■□□□ 1.14
SKP1-206ENST00000519321 POT1Q9NUX5 634 aa22.15■■□□□ 1.14
SKP1-206ENST00000519321 IL1RAPL1Q9NZN1 696 aa22.15■■□□□ 1.14
SKP1-206ENST00000519321 FAM8A1Q9UBU6 413 aa22.15■■□□□ 1.14
SKP1-206ENST00000519321 KPNA5O15131 536 aa22.14■■□□□ 1.13
SKP1-206ENST00000519321 PPM1DO15297 605 aa22.14■■□□□ 1.13
SKP1-206ENST00000519321 ESR1P03372 595 aa22.14■■□□□ 1.13
SKP1-206ENST00000519321 EIF3BP55884 814 aaKnown RBP22.14■■□□□ 1.13
SKP1-206ENST00000519321 ZDHHC24Q6UX98 284 aa22.14■■□□□ 1.13
SKP1-206ENST00000519321 ANKMY2Q8IV38 441 aa22.14■■□□□ 1.13
SKP1-206ENST00000519321 CACTIN-AS1Q8N1I8 211 aa22.14■■□□□ 1.13
SKP1-206ENST00000519321 LPGAT1Q92604 370 aa22.14■■□□□ 1.13
SKP1-206ENST00000519321 CXorf40BQ96DE9 158 aa22.14■■□□□ 1.13
SKP1-206ENST00000519321 SLC38A3Q99624 504 aa22.14■■□□□ 1.13
SKP1-206ENST00000519321 SAYSD1Q9NPB0 183 aa22.14■■□□□ 1.13
SKP1-206ENST00000519321 SCHIP1Q9P0W5 487 aaPredicted RBP22.14■■□□□ 1.13
SKP1-206ENST00000519321 DMGDHQ9UI17 866 aaKnown RBP22.14■■□□□ 1.13
SKP1-206ENST00000519321 DCHS1Q96JQ0 3298 aa22.14■■□□□ 1.13
SKP1-206ENST00000519321 PIKFYVEQ9Y2I7 2098 aa22.13■■□□□ 1.13
SKP1-206ENST00000519321 ESYT3A0FGR9 886 aa22.13■■□□□ 1.13
SKP1-206ENST00000519321 BHMG1C9JSJ3 638 aaPredicted RBP22.13■■□□□ 1.13
SKP1-206ENST00000519321 IFRD1O00458 451 aaPredicted RBP22.13■■□□□ 1.13
SKP1-206ENST00000519321 TCEA3O75764 348 aa22.13■■□□□ 1.13
SKP1-206ENST00000519321 S1PR4O95977 384 aa22.13■■□□□ 1.13
SKP1-206ENST00000519321 BRAFP15056 766 aa22.13■■□□□ 1.13
SKP1-206ENST00000519321 CD151P48509 253 aa22.13■■□□□ 1.13
SKP1-206ENST00000519321 UBE2IP63279 158 aaKnown RBP22.13■■□□□ 1.13
SKP1-206ENST00000519321 INSM1Q01101 510 aaPredicted RBP22.13■■□□□ 1.13
SKP1-206ENST00000519321 FOXK2Q01167 660 aa22.13■■□□□ 1.13
SKP1-206ENST00000519321 CLCA4Q14CN2 919 aa22.13■■□□□ 1.13
SKP1-206ENST00000519321 TRADDQ15628 312 aa22.13■■□□□ 1.13
SKP1-206ENST00000519321 CLPPQ16740 277 aaPredicted RBP22.13■■□□□ 1.13
SKP1-206ENST00000519321 ZNF658BQ4V348 819 aaPredicted RBP22.13■■□□□ 1.13
SKP1-206ENST00000519321 SYTL3Q4VX76 610 aa22.13■■□□□ 1.13
SKP1-206ENST00000519321 KIAA0408Q6ZU52 694 aa22.13■■□□□ 1.13
SKP1-206ENST00000519321 TMPRSS7Q7RTY8 843 aa22.13■■□□□ 1.13
SKP1-206ENST00000519321 SPRED1Q7Z699 444 aa22.13■■□□□ 1.13
SKP1-206ENST00000519321 DENND6AQ8IWF6 608 aa22.13■■□□□ 1.13
SKP1-206ENST00000519321 PALM2Q8IXS6 379 aa22.13■■□□□ 1.13
SKP1-206ENST00000519321 CHCHD4Q8N4Q1 142 aa22.13■■□□□ 1.13
SKP1-206ENST00000519321 GSDMBQ8TAX9 411 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms