RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 METTL18O95568 372 aa10.36□□□□□ -0.75
SPIDR-205ENST00000518060 IFNB1P01574 187 aa10.36□□□□□ -0.75
SPIDR-205ENST00000518060 POLBP06746 335 aa10.36□□□□□ -0.75
SPIDR-205ENST00000518060 MTHFD1P11586 935 aaKnown RBP10.36□□□□□ -0.75
SPIDR-205ENST00000518060 WT1P19544 449 aaPredicted RBP10.36□□□□□ -0.75
SPIDR-205ENST00000518060 HADHAP40939 763 aa10.36□□□□□ -0.75
SPIDR-205ENST00000518060 ZNF140P52738 457 aaPredicted RBP10.36□□□□□ -0.75
SPIDR-205ENST00000518060 GDF10P55107 478 aa10.36□□□□□ -0.75
SPIDR-205ENST00000518060 GSDMDP57764 484 aa10.36□□□□□ -0.75
SPIDR-205ENST00000518060 DMPKQ09013 629 aa10.36□□□□□ -0.75
SPIDR-205ENST00000518060 ARMC6Q6NXE6 501 aa10.36□□□□□ -0.75
SPIDR-205ENST00000518060 KLHL35Q6PF15 583 aa10.36□□□□□ -0.75
SPIDR-205ENST00000518060 WASH2PQ6VEQ5 465 aa10.36□□□□□ -0.75
SPIDR-205ENST00000518060 ZNF605Q86T29 641 aa10.36□□□□□ -0.75
SPIDR-205ENST00000518060 RASGRP3Q8IV61 690 aa10.36□□□□□ -0.75
SPIDR-205ENST00000518060 UNC5BQ8IZJ1 945 aa10.36□□□□□ -0.75
SPIDR-205ENST00000518060 NLGN4XQ8N0W4 816 aa10.36□□□□□ -0.75
SPIDR-205ENST00000518060 ZNF843Q8N446 348 aa10.36□□□□□ -0.75
SPIDR-205ENST00000518060 BMPERQ8N8U9 685 aa10.36□□□□□ -0.75
SPIDR-205ENST00000518060 NLGN4YQ8NFZ3 816 aaPredicted RBP10.36□□□□□ -0.75
SPIDR-205ENST00000518060 NKD1Q969G9 470 aa10.36□□□□□ -0.75
SPIDR-205ENST00000518060 RTP4Q96DX8 246 aa10.36□□□□□ -0.75
SPIDR-205ENST00000518060 OR6C1Q96RD1 312 aa10.36□□□□□ -0.75
SPIDR-205ENST00000518060 COPS8Q99627 209 aa10.36□□□□□ -0.75
SPIDR-205ENST00000518060 ULBP3Q9BZM4 244 aa10.36□□□□□ -0.75
SPIDR-205ENST00000518060 WASH6PQ9NQA3 447 aa10.36□□□□□ -0.75
SPIDR-205ENST00000518060 PDP2Q9P2J9 529 aa10.36□□□□□ -0.75
SPIDR-205ENST00000518060 KALRNO60229 2985 aa10.36□□□□□ -0.75
SPIDR-205ENST00000518060 ZNF462Q96JM2 2506 aa10.36□□□□□ -0.75
SPIDR-205ENST00000518060 MGAT4DA6NG13 374 aa10.35□□□□□ -0.75
SPIDR-205ENST00000518060 PRR19A6NJB7 356 aa10.35□□□□□ -0.75
SPIDR-205ENST00000518060 KRT86O43790 486 aa10.35□□□□□ -0.75
SPIDR-205ENST00000518060 GAS8O95995 478 aa10.35□□□□□ -0.75
SPIDR-205ENST00000518060 C9P02748 559 aa10.35□□□□□ -0.75
SPIDR-205ENST00000518060 ANKRD34CP0C6C1 535 aa10.35□□□□□ -0.75
SPIDR-205ENST00000518060 FAM87AP0C7U9 286 aa10.35□□□□□ -0.75
SPIDR-205ENST00000518060 PRKAR1AP10644 381 aa10.35□□□□□ -0.75
SPIDR-205ENST00000518060 ARSDP51689 593 aa10.35□□□□□ -0.75
SPIDR-205ENST00000518060 PPP1CAP62136 330 aa10.35□□□□□ -0.75
SPIDR-205ENST00000518060 SH3BP2P78314 561 aa10.35□□□□□ -0.75
SPIDR-205ENST00000518060 KLF1Q13351 362 aaPredicted RBP10.35□□□□□ -0.75
SPIDR-205ENST00000518060 SNX1Q13596 522 aa10.35□□□□□ -0.75
SPIDR-205ENST00000518060 DNTTIP2Q5QJE6 756 aaKnown RBP10.35□□□□□ -0.75
SPIDR-205ENST00000518060 PPP1R21Q6ZMI0 780 aa10.35□□□□□ -0.75
SPIDR-205ENST00000518060 MICALCLQ6ZW33 695 aa10.35□□□□□ -0.75
SPIDR-205ENST00000518060 SNX20Q7Z614 316 aa10.35□□□□□ -0.75
SPIDR-205ENST00000518060 CFAP206Q8IYR0 622 aa10.35□□□□□ -0.75
SPIDR-205ENST00000518060 NXPE1Q8N323 547 aa10.35□□□□□ -0.75
SPIDR-205ENST00000518060 DNAAF3Q8N9W5 541 aa10.35□□□□□ -0.75
SPIDR-205ENST00000518060 OR2L2Q8NH16 312 aa10.35□□□□□ -0.75
SPIDR-205ENST00000518060 C1orf54Q8WWF1 131 aa10.35□□□□□ -0.75
SPIDR-205ENST00000518060 MED8Q96G25 268 aa10.35□□□□□ -0.75
SPIDR-205ENST00000518060 WBP1Q96G27 269 aa10.35□□□□□ -0.75
SPIDR-205ENST00000518060 HES6Q96HZ4 224 aa10.35□□□□□ -0.75
SPIDR-205ENST00000518060 ZPBPQ9BS86 351 aa10.35□□□□□ -0.75
SPIDR-205ENST00000518060 SEMA4CQ9C0C4 833 aa10.35□□□□□ -0.75
SPIDR-205ENST00000518060 VPS37BQ9H9H4 285 aa10.35□□□□□ -0.75
SPIDR-205ENST00000518060 LZTFL1Q9NQ48 299 aa10.35□□□□□ -0.75
SPIDR-205ENST00000518060 LNPEPQ9UIQ6 1025 aa10.35□□□□□ -0.75
SPIDR-205ENST00000518060 ZNF148Q9UQR1 794 aa10.35□□□□□ -0.75
SPIDR-205ENST00000518060 HEMK1Q9Y5R4 338 aaPredicted RBP10.35□□□□□ -0.75
SPIDR-205ENST00000518060 DNMT3AQ9Y6K1 912 aaPredicted RBP10.35□□□□□ -0.75
SPIDR-205ENST00000518060 PIEZO2Q9H5I5 2752 aa10.35□□□□□ -0.75
SPIDR-205ENST00000518060 SMG1Q96Q15 3661 aaKnown RBP10.35□□□□□ -0.75
SPIDR-205ENST00000518060 GCN1Q92616 2671 aaKnown RBP10.34□□□□□ -0.75
SPIDR-205ENST00000518060 SCN8AQ9UQD0 1980 aa10.34□□□□□ -0.75
SPIDR-205ENST00000518060 CFAP46Q8IYW2 2715 aa10.34□□□□□ -0.75
SPIDR-205ENST00000518060 UBA6A0AVT1 1052 aaPredicted RBP10.34□□□□□ -0.75
SPIDR-205ENST00000518060 OR6C74A6NCV1 312 aa10.34□□□□□ -0.75
SPIDR-205ENST00000518060 PSMD3O43242 534 aa10.34□□□□□ -0.75
SPIDR-205ENST00000518060 LDB2O43679 373 aa10.34□□□□□ -0.75
SPIDR-205ENST00000518060 AP2A1O95782 977 aa10.34□□□□□ -0.75
SPIDR-205ENST00000518060 ITGB2P05107 769 aa10.34□□□□□ -0.75
SPIDR-205ENST00000518060 MAP4P27816 1152 aaKnown RBP10.34□□□□□ -0.75
SPIDR-205ENST00000518060 ARCN1P48444 511 aaKnown RBP10.34□□□□□ -0.75
SPIDR-205ENST00000518060 XIAPP98170 497 aa10.34□□□□□ -0.75
SPIDR-205ENST00000518060 NFATC3Q12968 1075 aa10.34□□□□□ -0.75
SPIDR-205ENST00000518060 RPS6KA1Q15418 735 aa10.34□□□□□ -0.75
SPIDR-205ENST00000518060 TBR1Q16650 682 aa10.34□□□□□ -0.75
SPIDR-205ENST00000518060 BCL7AQ4VC05 210 aa10.34□□□□□ -0.75
SPIDR-205ENST00000518060 CCDC38Q502W7 563 aa10.34□□□□□ -0.75
SPIDR-205ENST00000518060 METRNLQ641Q3 311 aa10.34□□□□□ -0.75
SPIDR-205ENST00000518060 DENND5AQ6IQ26 1287 aa10.34□□□□□ -0.75
SPIDR-205ENST00000518060 ZNF449Q6P9G9 518 aa10.34□□□□□ -0.75
SPIDR-205ENST00000518060 PRICKLE2Q7Z3G6 844 aa10.34□□□□□ -0.75
SPIDR-205ENST00000518060 PRSS42Q7Z5A4 293 aa10.34□□□□□ -0.75
SPIDR-205ENST00000518060 LINC00523Q86TU6 105 aa10.34□□□□□ -0.75
SPIDR-205ENST00000518060 OOSP2Q86WS3 158 aa10.34□□□□□ -0.75
SPIDR-205ENST00000518060 RNF10Q8N5U6 811 aaKnown RBP10.34□□□□□ -0.75
SPIDR-205ENST00000518060 CCDC89Q8N998 374 aa10.34□□□□□ -0.75
SPIDR-205ENST00000518060 SIDT2Q8NBJ9 832 aaKnown RBP10.34□□□□□ -0.75
SPIDR-205ENST00000518060 SPDYE1Q8NFV5 336 aaPredicted RBP10.34□□□□□ -0.75
SPIDR-205ENST00000518060 SLC35B2Q8TB61 432 aa10.34□□□□□ -0.75
SPIDR-205ENST00000518060 HM13Q8TCT9 377 aa10.34□□□□□ -0.75
SPIDR-205ENST00000518060 HEXDCQ8WVB3 486 aa10.34□□□□□ -0.75
SPIDR-205ENST00000518060 STAMBPL1Q96FJ0 436 aa10.34□□□□□ -0.75
SPIDR-205ENST00000518060 RMDN2Q96LZ7 410 aa10.34□□□□□ -0.75
SPIDR-205ENST00000518060 INSM2Q96T92 566 aaPredicted RBP10.34□□□□□ -0.75
SPIDR-205ENST00000518060 ZNF768Q9H5H4 540 aaKnown RBP10.34□□□□□ -0.75
SPIDR-205ENST00000518060 FBXO8Q9NRD0 319 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms