RNA–Protein interactions for RNA: ENST00000517980.5

CTNNA1-206, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-206ENST00000517980 DUS1LQ6P1R4 473 aaKnown RBP16.93■□□□□ 0.3
CTNNA1-206ENST00000517980 BBS12Q6ZW61 710 aa16.93■□□□□ 0.3
CTNNA1-206ENST00000517980 PRSS42Q7Z5A4 293 aa16.93■□□□□ 0.3
CTNNA1-206ENST00000517980 TMEM135Q86UB9 458 aa16.93■□□□□ 0.3
CTNNA1-206ENST00000517980 SIDT2Q8NBJ9 832 aaKnown RBP16.93■□□□□ 0.3
CTNNA1-206ENST00000517980 DDHD1Q8NEL9 900 aa16.93■□□□□ 0.3
CTNNA1-206ENST00000517980 SPDYE1Q8NFV5 336 aaPredicted RBP16.93■□□□□ 0.3
CTNNA1-206ENST00000517980 OR4K2Q8NGD2 314 aa16.93■□□□□ 0.3
CTNNA1-206ENST00000517980 APOBEC4Q8WW27 367 aaKnown RBP16.93■□□□□ 0.3
CTNNA1-206ENST00000517980 STAMBPL1Q96FJ0 436 aa16.93■□□□□ 0.3
CTNNA1-206ENST00000517980 RBM41Q96IZ5 413 aaKnown RBP16.93■□□□□ 0.3
CTNNA1-206ENST00000517980 MAP3K3Q99759 626 aa16.93■□□□□ 0.3
CTNNA1-206ENST00000517980 FAM96AQ9H5X1 160 aa16.93■□□□□ 0.3
CTNNA1-206ENST00000517980 IMP3Q9NV31 184 aaKnown RBP16.93■□□□□ 0.3
CTNNA1-206ENST00000517980 FKBPLQ9UIM3 349 aa16.93■□□□□ 0.3
CTNNA1-206ENST00000517980 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.93■□□□□ 0.3
CTNNA1-206ENST00000517980 DNMT3AQ9Y6K1 912 aaPredicted RBP16.93■□□□□ 0.3
CTNNA1-206ENST00000517980 ARHGAP6O43182 974 aa16.92■□□□□ 0.3
CTNNA1-206ENST00000517980 NTRK1P04629 796 aa16.92■□□□□ 0.3
CTNNA1-206ENST00000517980 POLBP06746 335 aa16.92■□□□□ 0.3
CTNNA1-206ENST00000517980 FGF5P12034 268 aa16.92■□□□□ 0.3
CTNNA1-206ENST00000517980 LPOP22079 712 aaPredicted RBP16.92■□□□□ 0.3
CTNNA1-206ENST00000517980 ARCN1P48444 511 aaKnown RBP16.92■□□□□ 0.3
CTNNA1-206ENST00000517980 MC1RQ01726 317 aa16.92■□□□□ 0.3
CTNNA1-206ENST00000517980 OTUD4Q01804 1114 aaKnown RBP16.92■□□□□ 0.3
CTNNA1-206ENST00000517980 DMPKQ09013 629 aa16.92■□□□□ 0.3
CTNNA1-206ENST00000517980 XRCC4Q13426 336 aa16.92■□□□□ 0.3
CTNNA1-206ENST00000517980 SPARCL1Q14515 664 aa16.92■□□□□ 0.3
CTNNA1-206ENST00000517980 SPA17Q15506 151 aa16.92■□□□□ 0.3
CTNNA1-206ENST00000517980 FBXO38Q6PIJ6 1188 aa16.92■□□□□ 0.3
CTNNA1-206ENST00000517980 RANBP10Q6VN20 620 aa16.92■□□□□ 0.3
CTNNA1-206ENST00000517980 PPP1R3BQ86XI6 285 aa16.92■□□□□ 0.3
CTNNA1-206ENST00000517980 LILRA3Q8N6C8 439 aaPredicted RBP16.92■□□□□ 0.3
CTNNA1-206ENST00000517980 C9orf43Q8TAL5 461 aaPredicted RBP16.92■□□□□ 0.3
CTNNA1-206ENST00000517980 ACTL9Q8TC94 416 aa16.92■□□□□ 0.3
CTNNA1-206ENST00000517980 DTX3LQ8TDB6 740 aa16.92■□□□□ 0.3
CTNNA1-206ENST00000517980 ZCCHC2Q9C0B9 1178 aaKnown RBP16.92■□□□□ 0.3
CTNNA1-206ENST00000517980 RAB33BQ9H082 229 aa16.92■□□□□ 0.3
CTNNA1-206ENST00000517980 GBA3Q9H227 469 aa16.92■□□□□ 0.3
CTNNA1-206ENST00000517980 ASB8Q9H765 288 aa16.92■□□□□ 0.3
CTNNA1-206ENST00000517980 HRASLS2Q9NWW9 162 aa16.92■□□□□ 0.3
CTNNA1-206ENST00000517980 PADI1Q9ULC6 663 aa16.92■□□□□ 0.3
CTNNA1-206ENST00000517980 PCDHB3Q9Y5E6 796 aa16.92■□□□□ 0.3
CTNNA1-206ENST00000517980 TNRC6AQ8NDV7 1962 aaKnown RBP16.91■□□□□ 0.3
CTNNA1-206ENST00000517980 MED13Q9UHV7 2174 aa16.91■□□□□ 0.3
CTNNA1-206ENST00000517980 MACROD2A1Z1Q3 448 aa16.91■□□□□ 0.3
CTNNA1-206ENST00000517980 C2orf81A6NN90 581 aa16.91■□□□□ 0.3
CTNNA1-206ENST00000517980 K7EM74 188 aa16.91■□□□□ 0.3
CTNNA1-206ENST00000517980 APOC4-APOC2K7ER74 178 aa16.91■□□□□ 0.3
CTNNA1-206ENST00000517980 DDX3YO15523 660 aaKnown RBP16.91■□□□□ 0.3
CTNNA1-206ENST00000517980 ANXA9O76027 345 aa16.91■□□□□ 0.3
CTNNA1-206ENST00000517980 PRAMEF1O95521 474 aa16.91■□□□□ 0.3
CTNNA1-206ENST00000517980 APOC2P02655 101 aa16.91■□□□□ 0.3
CTNNA1-206ENST00000517980 CCNYL3P0C7X3 344 aa16.91■□□□□ 0.3
CTNNA1-206ENST00000517980 EBLN1P0CF75 366 aa16.91■□□□□ 0.3
CTNNA1-206ENST00000517980 MTHFD1P11586 935 aaKnown RBP16.91■□□□□ 0.3
CTNNA1-206ENST00000517980 NR1D1P20393 614 aa16.91■□□□□ 0.3
CTNNA1-206ENST00000517980 PSMB4P28070 264 aa16.91■□□□□ 0.3
CTNNA1-206ENST00000517980 ADRA1AP35348 466 aa16.91■□□□□ 0.3
CTNNA1-206ENST00000517980 NAP1L1P55209 391 aaKnown RBP16.91■□□□□ 0.3
CTNNA1-206ENST00000517980 EIF3EP60228 445 aaKnown RBP16.91■□□□□ 0.3
CTNNA1-206ENST00000517980 TAF1AQ15573 450 aaPredicted RBP16.91■□□□□ 0.3
CTNNA1-206ENST00000517980 LONRF2Q1L5Z9 754 aa16.91■□□□□ 0.3
CTNNA1-206ENST00000517980 ANKRD20A2Q5SQ80 823 aa16.91■□□□□ 0.3
CTNNA1-206ENST00000517980 ANKRD20A1Q5TYW2 823 aa16.91■□□□□ 0.3
CTNNA1-206ENST00000517980 ANKRD20A3Q5VUR7 823 aa16.91■□□□□ 0.3
CTNNA1-206ENST00000517980 PWWP2BQ6NUJ5 590 aa16.91■□□□□ 0.3
CTNNA1-206ENST00000517980 C11orf63Q6NUN7 778 aa16.91■□□□□ 0.3
CTNNA1-206ENST00000517980 FAM199XQ6PEV8 388 aaPredicted RBP16.91■□□□□ 0.3
CTNNA1-206ENST00000517980 DARS2Q6PI48 645 aaKnown RBP16.91■□□□□ 0.3
CTNNA1-206ENST00000517980 CFAP206Q8IYR0 622 aa16.91■□□□□ 0.3
CTNNA1-206ENST00000517980 OR13C4Q8NGS5 318 aa16.91■□□□□ 0.3
CTNNA1-206ENST00000517980 CCDC110Q8TBZ0 833 aa16.91■□□□□ 0.3
CTNNA1-206ENST00000517980 C12orf66Q96MD2 445 aa16.91■□□□□ 0.3
CTNNA1-206ENST00000517980 PPM1MQ96MI6 270 aa16.91■□□□□ 0.3
CTNNA1-206ENST00000517980 RUFY1Q96T51 708 aa16.91■□□□□ 0.3
CTNNA1-206ENST00000517980 EPN3Q9H201 632 aa16.91■□□□□ 0.3
CTNNA1-206ENST00000517980 TUBD1Q9UJT1 453 aa16.91■□□□□ 0.3
CTNNA1-206ENST00000517980 PCDHA3Q9Y5H8 950 aa16.91■□□□□ 0.3
CTNNA1-206ENST00000517980 KCNMB2Q9Y691 235 aa16.91■□□□□ 0.3
CTNNA1-206ENST00000517980 PIKFYVEQ9Y2I7 2098 aa16.91■□□□□ 0.3
CTNNA1-206ENST00000517980 COL12A1Q99715 3063 aa16.9■□□□□ 0.3
CTNNA1-206ENST00000517980 SEC16AO15027 2179 aa16.9■□□□□ 0.3
CTNNA1-206ENST00000517980 UBA6A0AVT1 1052 aaPredicted RBP16.9■□□□□ 0.3
CTNNA1-206ENST00000517980 PIPSLA2A3N6 862 aa16.9■□□□□ 0.3
CTNNA1-206ENST00000517980 CDC14CA4D256 554 aa16.9■□□□□ 0.3
CTNNA1-206ENST00000517980 OR6C74A6NCV1 312 aa16.9■□□□□ 0.3
CTNNA1-206ENST00000517980 MGAT4DA6NG13 374 aa16.9■□□□□ 0.3
CTNNA1-206ENST00000517980 CCL22O00626 93 aa16.9■□□□□ 0.3
CTNNA1-206ENST00000517980 KCNN4O15554 427 aa16.9■□□□□ 0.3
CTNNA1-206ENST00000517980 SGTAO43765 313 aa16.9■□□□□ 0.3
CTNNA1-206ENST00000517980 SRP72O76094 671 aaKnown RBP16.9■□□□□ 0.3
CTNNA1-206ENST00000517980 XIAPP98170 497 aa16.9■□□□□ 0.3
CTNNA1-206ENST00000517980 GSE1Q14687 1217 aa16.9■□□□□ 0.3
CTNNA1-206ENST00000517980 CCDC170Q8IYT3 715 aa16.9■□□□□ 0.3
CTNNA1-206ENST00000517980 CT55Q8WUE5 264 aa16.9■□□□□ 0.3
CTNNA1-206ENST00000517980 SLC41A2Q96JW4 573 aa16.9■□□□□ 0.3
CTNNA1-206ENST00000517980 OSBPL8Q9BZF1 889 aa16.9■□□□□ 0.3
CTNNA1-206ENST00000517980 PDE7BQ9NP56 450 aa16.9■□□□□ 0.3
CTNNA1-206ENST00000517980 SEMA5BQ9P283 1151 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms