RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 SETD4Q9NVD3 440 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 ADPRHL2Q9NX46 363 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 ERVK13-1Q9NX77 482 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 MTMR4Q9NYA4 1195 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 WWOXQ9NZC7 414 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 NINJ2Q9NZG7 142 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 ZNF224Q9NZL3 707 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 KLQ9UEF7 1012 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 EPHA6Q9UF33 1036 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 NDRG3Q9UGV2 375 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 FBXO5Q9UKT4 447 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 COPS3Q9UNS2 423 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 GPR55Q9Y2T6 319 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 PLLPQ9Y342 182 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 SF3B6Q9Y3B4 125 aaKnown RBP4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 CHTOPQ9Y3Y2 248 aaKnown RBP4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 TCAF1Q9Y4C2 921 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 AFG3L2Q9Y4W6 797 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 PCDHGB2Q9Y5G2 931 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 PCDHA3Q9Y5H8 950 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 HEMK1Q9Y5R4 338 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 HSPE1-MOB4S4R3N1 261 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 SCN4AP35499 1836 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 PALLDQ8WX93 1383 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 UTYO14607 1347 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 LAMA4Q16363 1823 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 A0A087X0T9 212 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 FAM221BA6H8Z2 402 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 KRT87PA6NCN2 255 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 MROH6A6NGR9 719 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 SDR42E2A6NKP2 422 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 A6NL46 340 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 NT5C1B-RDH14C9J2C7 533 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 CACNB4O00305 520 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 CDC7O00311 574 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 ZNF213O14771 459 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 PCDH17O14917 1159 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 ADAM12O43184 909 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 LPXNO60711 386 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 CDC123O75794 336 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 OR2B3O76000 313 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 CIAO1O76071 339 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 SLC22A5O76082 557 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 ALDH1A2O94788 518 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 C1QBP02746 253 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 RB1P06400 928 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 PLA2G4BP0C869 781 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 DHRS4L1P0CG22 281 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 PLS3P13797 630 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 IL1R1P14778 569 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 IFNGR1P15260 489 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 CREB1P16220 341 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 ZNF30P17039 623 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 TNNI3P19429 210 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 ZP3P21754 424 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 MATN1P21941 496 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 XPAP23025 273 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 CALML3P27482 149 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 SLC7A1P30825 629 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 GUCY1A2P33402 732 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 EIF2S3P41091 472 aaKnown RBP4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 POU3F4P49335 361 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 CCT3P49368 545 aaKnown RBP4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 SULT1E1P49888 294 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 CPT1AP50416 773 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 TOB1P50616 345 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 CLCN4P51793 760 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 CLCNKBP51801 687 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 GPR143P51810 404 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 TKTL1P51854 596 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 AKR1D1P51857 326 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 GABARAPL2P60520 117 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 AP1S1P61966 158 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 KCNJ10P78508 379 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 FKBP3Q00688 224 aaKnown RBP4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 POU4F1Q01851 419 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 SLC18A2Q05940 514 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 RGS1Q08116 209 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 MERTKQ12866 999 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 KCNAB2Q13303 367 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 TRIM25Q14258 630 aaKnown RBP4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 GCKRQ14397 625 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 ZNF273Q14593 569 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 KCNJ11Q14654 390 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 ZNF174Q15697 407 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 SLC1A5Q15758 541 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 SSX2Q16385 188 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 MAPKAPK3Q16644 382 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 DUSP6Q16828 381 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 PFKFB4Q16877 469 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 EXOC3L4Q17RC7 722 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 VMACQ2NL98 169 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 DPY19L1Q2PZI1 675 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 EIF2S3LQ2VIR3 472 aaKnown RBP4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 BTBD16Q32M84 506 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 RNF212Q495C1 297 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 TRIM60Q495X7 471 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 GPAT3Q53EU6 434 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 CLLU1Q5K131 121 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms