RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 MTHFD1P11586 935 aaKnown RBP17.12■□□□□ 0.33
DDX41-217ENST00000515562 CA5AP35218 305 aa17.12■□□□□ 0.33
DDX41-217ENST00000515562 HADHAP40939 763 aa17.12■□□□□ 0.33
DDX41-217ENST00000515562 SEPHS1P49903 392 aa17.12■□□□□ 0.33
DDX41-217ENST00000515562 ZNF140P52738 457 aaPredicted RBP17.12■□□□□ 0.33
DDX41-217ENST00000515562 KIF5AQ12840 1032 aa17.12■□□□□ 0.33
DDX41-217ENST00000515562 NFATC3Q12968 1075 aa17.12■□□□□ 0.33
DDX41-217ENST00000515562 PLCL1Q15111 1095 aa17.12■□□□□ 0.33
DDX41-217ENST00000515562 RPE65Q16518 533 aa17.12■□□□□ 0.33
DDX41-217ENST00000515562 BCL7AQ4VC05 210 aa17.12■□□□□ 0.33
DDX41-217ENST00000515562 CACHD1Q5VU97 1274 aa17.12■□□□□ 0.33
DDX41-217ENST00000515562 METRNLQ641Q3 311 aa17.12■□□□□ 0.33
DDX41-217ENST00000515562 IRGCQ6NXR0 463 aa17.12■□□□□ 0.33
DDX41-217ENST00000515562 AADACL2Q6P093 401 aa17.12■□□□□ 0.33
DDX41-217ENST00000515562 DET1Q7L5Y6 550 aa17.12■□□□□ 0.33
DDX41-217ENST00000515562 GPR150Q8NGU9 434 aa17.12■□□□□ 0.33
DDX41-217ENST00000515562 OR2L2Q8NH16 312 aa17.12■□□□□ 0.33
DDX41-217ENST00000515562 FAM117AQ9C073 453 aa17.12■□□□□ 0.33
DDX41-217ENST00000515562 ADNPQ9H2P0 1102 aa17.12■□□□□ 0.33
DDX41-217ENST00000515562 ARNT2Q9HBZ2 717 aa17.12■□□□□ 0.33
DDX41-217ENST00000515562 STARD5Q9NSY2 213 aa17.12■□□□□ 0.33
DDX41-217ENST00000515562 IMP3Q9NV31 184 aaKnown RBP17.12■□□□□ 0.33
DDX41-217ENST00000515562 CRLS1Q9UJA2 301 aa17.12■□□□□ 0.33
DDX41-217ENST00000515562 ACSL5Q9ULC5 683 aa17.12■□□□□ 0.33
DDX41-217ENST00000515562 PSMD13Q9UNM6 376 aa17.12■□□□□ 0.33
DDX41-217ENST00000515562 HEMK1Q9Y5R4 338 aaPredicted RBP17.12■□□□□ 0.33
DDX41-217ENST00000515562 AGAP14A8MT82 685 aa17.11■□□□□ 0.33
DDX41-217ENST00000515562 CFAP99D6REC4 459 aa17.11■□□□□ 0.33
DDX41-217ENST00000515562 SLC35G4P0C7Q5 338 aa17.11■□□□□ 0.33
DDX41-217ENST00000515562 ITGALP20701 1170 aa17.11■□□□□ 0.33
DDX41-217ENST00000515562 STAT5AP42229 794 aa17.11■□□□□ 0.33
DDX41-217ENST00000515562 OLIG2Q13516 323 aa17.11■□□□□ 0.33
DDX41-217ENST00000515562 ARHGEF18Q6ZSZ5 1173 aa17.11■□□□□ 0.33
DDX41-217ENST00000515562 FAM92BQ6ZTR7 304 aa17.11■□□□□ 0.33
DDX41-217ENST00000515562 TIPARPQ7Z3E1 657 aaKnown RBP17.11■□□□□ 0.33
DDX41-217ENST00000515562 KLHDC8BQ8IXV7 354 aa17.11■□□□□ 0.33
DDX41-217ENST00000515562 HEXDCQ8WVB3 486 aa17.11■□□□□ 0.33
DDX41-217ENST00000515562 KLHL6Q8WZ60 621 aa17.11■□□□□ 0.33
DDX41-217ENST00000515562 UBXN4Q92575 508 aa17.11■□□□□ 0.33
DDX41-217ENST00000515562 DCUN1D1Q96GG9 259 aa17.11■□□□□ 0.33
DDX41-217ENST00000515562 LINC00615Q96LM1 132 aaPredicted RBP17.11■□□□□ 0.33
DDX41-217ENST00000515562 OR6C1Q96RD1 312 aa17.11■□□□□ 0.33
DDX41-217ENST00000515562 LOC101059948A0A1B0GTJ6 334 aa17.1■□□□□ 0.33
DDX41-217ENST00000515562 SLC28A2O43868 658 aa17.1■□□□□ 0.33
DDX41-217ENST00000515562 KIF1CO43896 1103 aaKnown RBP17.1■□□□□ 0.33
DDX41-217ENST00000515562 SH3BP2P78314 561 aa17.1■□□□□ 0.33
DDX41-217ENST00000515562 XIAPP98170 497 aa17.1■□□□□ 0.33
DDX41-217ENST00000515562 MC1RQ01726 317 aa17.1■□□□□ 0.33
DDX41-217ENST00000515562 MSLNQ13421 630 aaPredicted RBP17.1■□□□□ 0.33
DDX41-217ENST00000515562 P3H1Q32P28 736 aa17.1■□□□□ 0.33
DDX41-217ENST00000515562 DENND5AQ6IQ26 1287 aa17.1■□□□□ 0.33
DDX41-217ENST00000515562 SNX20Q7Z614 316 aa17.1■□□□□ 0.33
DDX41-217ENST00000515562 TMEM139Q8IV31 216 aa17.1■□□□□ 0.33
DDX41-217ENST00000515562 RASGRP3Q8IV61 690 aa17.1■□□□□ 0.33
DDX41-217ENST00000515562 NXPE1Q8N323 547 aa17.1■□□□□ 0.33
DDX41-217ENST00000515562 OR13C4Q8NGS5 318 aa17.1■□□□□ 0.33
DDX41-217ENST00000515562 ZFPM2Q8WW38 1151 aa17.1■□□□□ 0.33
DDX41-217ENST00000515562 CD180Q99467 661 aa17.1■□□□□ 0.33
DDX41-217ENST00000515562 COPS8Q99627 209 aa17.1■□□□□ 0.33
DDX41-217ENST00000515562 WWP1Q9H0M0 922 aa17.1■□□□□ 0.33
DDX41-217ENST00000515562 GEMIN8Q9NWZ8 242 aaKnown RBP17.1■□□□□ 0.33
DDX41-217ENST00000515562 SEMA5BQ9P283 1151 aa17.1■□□□□ 0.33
DDX41-217ENST00000515562 IMPACTQ9P2X3 320 aa17.1■□□□□ 0.33
DDX41-217ENST00000515562 KCTD3Q9Y597 815 aa17.1■□□□□ 0.33
DDX41-217ENST00000515562 FGF5P12034 268 aa17.09■□□□□ 0.33
DDX41-217ENST00000515562 ITGB6P18564 788 aa17.09■□□□□ 0.33
DDX41-217ENST00000515562 NELFEP18615 380 aaKnown RBP17.09■□□□□ 0.33
DDX41-217ENST00000515562 PRLHRP49683 370 aa17.09■□□□□ 0.33
DDX41-217ENST00000515562 CDC20Q12834 499 aa17.09■□□□□ 0.33
DDX41-217ENST00000515562 KLF1Q13351 362 aaPredicted RBP17.09■□□□□ 0.33
DDX41-217ENST00000515562 PARP6Q2NL67 630 aa17.09■□□□□ 0.33
DDX41-217ENST00000515562 GPR33Q49SQ1 333 aa17.09■□□□□ 0.33
DDX41-217ENST00000515562 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.09■□□□□ 0.33
DDX41-217ENST00000515562 CRTC2Q53ET0 693 aaPredicted RBP17.09■□□□□ 0.33
DDX41-217ENST00000515562 PRICKLE2Q7Z3G6 844 aa17.09■□□□□ 0.33
DDX41-217ENST00000515562 PPP1R3BQ86XI6 285 aa17.09■□□□□ 0.33
DDX41-217ENST00000515562 KMT5CQ86Y97 462 aa17.09■□□□□ 0.33
DDX41-217ENST00000515562 UNC5BQ8IZJ1 945 aa17.09■□□□□ 0.33
DDX41-217ENST00000515562 FAM71DQ8N9W8 422 aa17.09■□□□□ 0.33
DDX41-217ENST00000515562 HM13Q8TCT9 377 aa17.09■□□□□ 0.33
DDX41-217ENST00000515562 STARD8Q92502 1023 aa17.09■□□□□ 0.33
DDX41-217ENST00000515562 STAMBPL1Q96FJ0 436 aa17.09■□□□□ 0.33
DDX41-217ENST00000515562 SLC41A2Q96JW4 573 aa17.09■□□□□ 0.33
DDX41-217ENST00000515562 C12orf66Q96MD2 445 aa17.09■□□□□ 0.33
DDX41-217ENST00000515562 LRRC40Q9H9A6 602 aa17.09■□□□□ 0.33
DDX41-217ENST00000515562 VPS37BQ9H9H4 285 aa17.09■□□□□ 0.33
DDX41-217ENST00000515562 TUBD1Q9UJT1 453 aa17.09■□□□□ 0.33
DDX41-217ENST00000515562 PACSIN2Q9UNF0 486 aaPredicted RBP17.09■□□□□ 0.33
DDX41-217ENST00000515562 RPS6KL1Q9Y6S9 549 aa17.09■□□□□ 0.33
DDX41-217ENST00000515562 OR5K3A6NET4 321 aa17.08■□□□□ 0.32
DDX41-217ENST00000515562 GOLGA6L3A6NEY3 463 aa17.08■□□□□ 0.32
DDX41-217ENST00000515562 TLCD2A6NGC4 264 aa17.08■□□□□ 0.32
DDX41-217ENST00000515562 LDB2O43679 373 aa17.08■□□□□ 0.32
DDX41-217ENST00000515562 FTCDO95954 541 aa17.08■□□□□ 0.32
DDX41-217ENST00000515562 CDC25BP30305 580 aa17.08■□□□□ 0.32
DDX41-217ENST00000515562 CCR10P46092 362 aa17.08■□□□□ 0.32
DDX41-217ENST00000515562 POLE2P56282 527 aa17.08■□□□□ 0.32
DDX41-217ENST00000515562 TMPRSS15P98073 1019 aa17.08■□□□□ 0.32
DDX41-217ENST00000515562 TUBB3Q13509 450 aa17.08■□□□□ 0.32
DDX41-217ENST00000515562 SPARCL1Q14515 664 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms